BLASTX nr result

ID: Rheum21_contig00039093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00039093
         (382 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida]        58   2e-06
ref|XP_006577501.1| PREDICTED: uncharacterized protein LOC102669...    55   7e-06

>gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida]
          Length = 803

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
 Frame = -2

Query: 339 QGQGRRLGPQDHDFP---RQDY-----HGGGLHQPLRGQPVHEQARLPNFKLDVEKFGKD 184
           +G+GR  GP         R+DY     H GG  +P +G   +    L + KL++  F  +
Sbjct: 92  RGRGRGRGPPMGYVGGNVRRDYGGFGDHYGGQPEPFQGGRDNNH-NLNSVKLNLPPFKGN 150

Query: 183 VEPEACLQWISKTEQTFDYQQFTDAQRVAIASIRFEDFADQWWMEEKAYRERNGIP 16
            +P A + W+ + E+ FD    TD ++   A   FE +A  WW   K  R R G+P
Sbjct: 151 CDPSAYIDWVLQIERLFDTNDMTDEKKGTYAISSFESYASTWWESVKRSRRRAGVP 206


>ref|XP_006577501.1| PREDICTED: uncharacterized protein LOC102669077 [Glycine max]
          Length = 461

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/74 (37%), Positives = 38/74 (51%)
 Frame = -2

Query: 276 GGLHQPLRGQPVHEQARLPNFKLDVEKFGKDVEPEACLQWISKTEQTFDYQQFTDAQRVA 97
           GG     RG     Q R+   KL+V  F    +P+A L W  KTE  F    +TDA++V 
Sbjct: 60  GGNRGNNRGNDGPRQNRVEGVKLNVPPFKGRSDPDAYLDWEMKTEHVFTCNDYTDAEKVK 119

Query: 96  IASIRFEDFADQWW 55
           +A+  F D+A  WW
Sbjct: 120 LAAAEFSDYALVWW 133


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