BLASTX nr result
ID: Rheum21_contig00038698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038698
(331 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 111 1e-22
gb|EMJ25387.1| hypothetical protein PRUPE_ppa016658mg, partial [... 84 2e-14
gb|EMJ13840.1| hypothetical protein PRUPE_ppa018094mg [Prunus pe... 73 4e-11
gb|EOY34430.1| Uncharacterized protein TCM_042111 [Theobroma cacao] 72 6e-11
gb|EOY08834.1| Uncharacterized protein TCM_024073 [Theobroma cacao] 72 8e-11
gb|EOY23818.1| Uncharacterized protein TCM_015594 [Theobroma cacao] 71 2e-10
gb|EOY08210.1| Uncharacterized protein TCM_022554 [Theobroma cacao] 69 5e-10
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7... 68 1e-09
ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [S... 67 3e-09
ref|XP_006354967.1| PREDICTED: uncharacterized protein LOC102599... 64 2e-08
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 64 2e-08
ref|XP_002446678.1| hypothetical protein SORBIDRAFT_06g020403 [S... 64 3e-08
ref|XP_002452516.1| hypothetical protein SORBIDRAFT_04g027285 [S... 64 3e-08
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn... 63 5e-08
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja... 62 6e-08
emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group] 62 6e-08
emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group] gi... 62 6e-08
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 62 6e-08
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 62 8e-08
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi... 62 8e-08
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 111 bits (277), Expect = 1e-22
Identities = 50/103 (48%), Positives = 68/103 (66%)
Frame = +2
Query: 2 QVCHQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSA 181
++C +IG+ G RV+A+GF GIWL W++ EV V P + QH+TVEI R G++PW+ SA
Sbjct: 46 RICDRIGFSGQTRVEAEGFRGGIWLFWKSEEVTVTPYGSHSQHLTVEIRRIGDDPWLFSA 105
Query: 182 IYASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFER 310
IYASP+ + R LW++L PWLL GDFN T + ER
Sbjct: 106 IYASPDSTLRKELWRELEQIKNQYTGPWLLAGDFNETSSLCER 148
>gb|EMJ25387.1| hypothetical protein PRUPE_ppa016658mg, partial [Prunus persica]
Length = 495
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/94 (38%), Positives = 55/94 (58%)
Frame = +2
Query: 5 VCHQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAI 184
+ +G+ VDA GF+ G+WLLW +V V + + Q I+ + G+ PW+ +A+
Sbjct: 370 IAQSLGFSNFEIVDATGFSGGLWLLWDATKVHVDILGTSDQSISASVAWPGQSPWLFTAV 429
Query: 185 YASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFN 286
YASP +R +LW+ L A +LPWL+ GDFN
Sbjct: 430 YASPCGIKRAKLWEYLSFIADCQHLPWLIAGDFN 463
>gb|EMJ13840.1| hypothetical protein PRUPE_ppa018094mg [Prunus persica]
Length = 351
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/82 (42%), Positives = 47/82 (57%)
Frame = +2
Query: 41 VDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIYASPNYSRRLRL 220
VD GF +WLLW +V V I + Q IT + G +PW+ SA+YA P + +L
Sbjct: 40 VDPMGFCGWLWLLWNDQKVHVEIIGTHDQVITACVSWPGMDPWLFSAVYAKPCGVKSEKL 99
Query: 221 WQDLGTFAQTNNLPWLLVGDFN 286
W+ LG + LPWL+VGDFN
Sbjct: 100 WEYLGFVVDCHFLPWLIVGDFN 121
>gb|EOY34430.1| Uncharacterized protein TCM_042111 [Theobroma cacao]
Length = 340
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 38 RVDAQGFADGIWLLWRT-AEVIVYPISLNPQHITVEICRRGEEPWILSAIYASPNYSRRL 214
RV+A GFA GIW+LW+ +V V + H+++E R WILSAIY SPN + R
Sbjct: 39 RVEAIGFAGGIWILWQDDVQVSVIRNHWHCVHMSIEYPARST--WILSAIYGSPNKAVRR 96
Query: 215 RLWQDLGTFAQTNNLPWLLVGDFN 286
LW++L FA+ PW+L+G+FN
Sbjct: 97 DLWKELSIFARGIETPWMLIGNFN 120
>gb|EOY08834.1| Uncharacterized protein TCM_024073 [Theobroma cacao]
Length = 660
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/103 (31%), Positives = 54/103 (52%)
Frame = +2
Query: 2 QVCHQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSA 181
++C + G+ +V A G++ GIW+ W AEVI + +T + +E W+L+
Sbjct: 184 KMCCKYGFQNYFKVKANGYSGGIWVFWN-AEVIEVEVLAYSSQLTHLLLNPSKEQWLLTE 242
Query: 182 IYASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFER 310
IY SP R LW L + ++PW+++GDFN + E+
Sbjct: 243 IYGSPLVKERKHLWDSLKLASNDQDIPWMVIGDFNQIISPDEK 285
>gb|EOY23818.1| Uncharacterized protein TCM_015594 [Theobroma cacao]
Length = 649
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/89 (33%), Positives = 54/89 (60%)
Frame = +2
Query: 47 AQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIYASPNYSRRLRLWQ 226
A+GF++GIW++W A V + ++ + Q + + + R + W+L+A+Y SPN R LW
Sbjct: 332 AEGFSEGIWVIWELAAVEIDILAYSSQLVRMTV-RSDNDEWLLTAVYGSPNAEERKWLWH 390
Query: 227 DLGTFAQTNNLPWLLVGDFNSTCASFERT 313
L ++ ++L W+++GDFN E+T
Sbjct: 391 SLKLSSEIHDLAWMIIGDFNQVLLLDEKT 419
>gb|EOY08210.1| Uncharacterized protein TCM_022554 [Theobroma cacao]
Length = 669
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/99 (35%), Positives = 57/99 (57%)
Frame = +2
Query: 14 QIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIYAS 193
Q+G+D RV+ GF+ GIW LW+ V ++ I + Q + + I + E W + +Y +
Sbjct: 291 QLGFDYSHRVEFVGFSGGIWCLWKE-NVKLHIIKNHNQCVHMTIEDKPNEFWFFTTVYGN 349
Query: 194 PNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFER 310
P+ + R +LW++L +F T PWLL DFN+ S E+
Sbjct: 350 PSPNIRCQLWEELSSFENTVTGPWLLANDFNAFLYSHEK 388
>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
gi|7268308|emb|CAB78602.1| hypothetical protein
[Arabidopsis thaliana]
Length = 655
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/104 (36%), Positives = 58/104 (55%)
Frame = +2
Query: 2 QVCHQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSA 181
++C ++G++ RVDA G + G+WLLWR++ V +S Q I +I G E L
Sbjct: 553 RICQRLGFENQFRVDAVGQSSGLWLLWRSSVGNVEIVSSTSQFIHAKIL-TGLESVHLVV 611
Query: 182 IYASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFERT 313
+YA+P+ SRR LW +L + P ++ GDFN+ ERT
Sbjct: 612 VYAAPSVSRRSGLWNELREAVSGLDGPLIIGGDFNTILRVDERT 655
>ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [Sorghum bicolor]
gi|241934144|gb|EES07289.1| hypothetical protein
SORBIDRAFT_04g028482 [Sorghum bicolor]
Length = 509
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/92 (36%), Positives = 48/92 (52%)
Frame = +2
Query: 11 HQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIYA 190
+ +GYD V++ G + G+ L W+ +V V + HI I G+EPW +S IY
Sbjct: 245 YSLGYDDSFAVNSSGKSGGLGLFWKN-DVNVSIKKFSKYHIDTIIEENGKEPWRMSFIYG 303
Query: 191 SPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFN 286
PN S R R W + +LPWL +GDFN
Sbjct: 304 EPNRSLRHRTWDIMKQMRSDFDLPWLCIGDFN 335
>ref|XP_006354967.1| PREDICTED: uncharacterized protein LOC102599840 [Solanum tuberosum]
Length = 288
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 QVCHQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEP-WILS 178
++ + Y V++V A G++ GI LLWR +E+ V P + Q I V I P + S
Sbjct: 74 KILQALDYTDVIQVPAFGYSGGIALLWRNSEINVEPFVITEQEIHVTIKVSSSFPKFFFS 133
Query: 179 AIYASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFER 310
IYA Y R LW++L PWL+ GDFN + E+
Sbjct: 134 VIYAKNTYGLRKILWENLKNLTARIKGPWLVCGDFNEVTNASEK 177
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/92 (39%), Positives = 46/92 (50%)
Frame = +2
Query: 17 IGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIYASP 196
IGY V ++A G + G+WLL + I + Q+ I RG + IYASP
Sbjct: 50 IGYTPVHIIEANGHSGGVWLLKHSTTNITSTVLDFNQYSITFIIGRGAAITTCTCIYASP 109
Query: 197 NYSRRLRLWQDLGTFAQTNNLPWLLVGDFNST 292
NYS R LW L T PW+L+GDFN T
Sbjct: 110 NYSMRPNLWNYLVNINDTITGPWMLIGDFNET 141
>ref|XP_002446678.1| hypothetical protein SORBIDRAFT_06g020403 [Sorghum bicolor]
gi|241937861|gb|EES11006.1| hypothetical protein
SORBIDRAFT_06g020403 [Sorghum bicolor]
Length = 633
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/92 (32%), Positives = 47/92 (51%)
Frame = +2
Query: 11 HQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIYA 190
+ + +D V++ G + G+ L W +V++ + HI I G+EPW +S IY
Sbjct: 382 YTLSFDNSFAVNSSGRSGGLGLFWNN-DVLLSIQKYSNYHIDTIISEHGKEPWRMSFIYG 440
Query: 191 SPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFN 286
PN S R R W + +LPW+ +GDFN
Sbjct: 441 EPNRSLRFRTWDIMKQMRSDTDLPWVCMGDFN 472
>ref|XP_002452516.1| hypothetical protein SORBIDRAFT_04g027285 [Sorghum bicolor]
gi|241932347|gb|EES05492.1| hypothetical protein
SORBIDRAFT_04g027285 [Sorghum bicolor]
Length = 689
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/92 (32%), Positives = 47/92 (51%)
Frame = +2
Query: 11 HQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIYA 190
+ + +D V++ G + G+ L W +V++ + HI I G+EPW +S IY
Sbjct: 382 YTLSFDNSFAVNSSGRSGGLGLFWNN-DVLLSIQKYSNYHIDTIISEHGKEPWRMSFIYG 440
Query: 191 SPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFN 286
PN S R R W + +LPW+ +GDFN
Sbjct: 441 EPNRSLRFRTWDIMKQMRSDTDLPWVCMGDFN 472
>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
Length = 464
Score = 62.8 bits (151), Expect = 5e-08
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = +2
Query: 8 CHQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEPWILSAIY 187
C +G++ RVD G + G+WLLW+ V ++ + Q I I G E L +Y
Sbjct: 48 CQGLGFENSFRVDVVGQSGGLWLLWKAEVGEVTIVNSSSQFIHARIVN-GVEALHLVTVY 106
Query: 188 ASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFER 310
A+P+ SRR LW+ L Q + P ++ GDFN+ + ER
Sbjct: 107 AAPSASRRSGLWEKLRDVVQAIDEPLIIGGDFNTIIRTDER 147
>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +2
Query: 11 HQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEP-WILSAIY 187
+++G G V++ G + G+ L W + + V IS+N ++I + P W + +Y
Sbjct: 704 NRLGLRGFAGVNSDGMSGGLALFWHES-IHVEIISMNERYIDAYVRLSVNAPVWHATFVY 762
Query: 188 ASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFE 307
P R R+W L + Q ++LPWL+VGDFN T FE
Sbjct: 763 GEPRVENRHRMWALLNSIKQVSDLPWLVVGDFNETLWQFE 802
>emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
Length = 1285
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +2
Query: 14 QIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEP-WILSAIYA 190
++ + G + V ++G + G+ L W + V V +N ++I + +EP W ++ +Y
Sbjct: 597 KLAFRGFVGVSSEGMSGGLALYWDES-VSVDVKDINKRYIDAYVRLSSDEPQWHITFVYG 655
Query: 191 SPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFE 307
P R R+W L T Q++ LPW+++GDFN T FE
Sbjct: 656 EPRVENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFE 694
>emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza
sativa Indica Group] gi|116309230|emb|CAH66320.1|
OSIGBa0150M16.3 [Oryza sativa Indica Group]
Length = 1711
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +2
Query: 14 QIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEP-WILSAIYA 190
++ + G + V ++G + G+ L W + V V +N ++I + +EP W ++ +Y
Sbjct: 597 KLAFRGFVGVSSEGMSGGLALYWDES-VSVDVKDINKRYIDAYVRLSSDEPQWHITFVYG 655
Query: 191 SPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFE 307
P R R+W L T Q++ LPW+++GDFN T FE
Sbjct: 656 EPRVENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFE 694
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +2
Query: 11 HQIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEP-WILSAIY 187
+++G G V++ G + G+ L W + + V IS+N ++I + P W + +Y
Sbjct: 704 NRLGLRGFAGVNSDGMSGGLALFWHES-IHVEIISMNERYIDAYVRLSVNAPVWHATFVY 762
Query: 188 ASPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFE 307
P R R+W L + Q ++LPWL+VGDFN T FE
Sbjct: 763 GEPRVENRHRMWALLNSIKQVSDLPWLVVGDFNETLWQFE 802
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +2
Query: 14 QIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEI-CRRGEEPWILSAIYA 190
Q+G+ GV V ++G++ G+ LLW+ EV V+ + + I V+I G + W L+ Y
Sbjct: 7 QLGFRGVTSVSSRGYSGGLALLWKE-EVDVHVCAFSDHFIDVKIGSNGGGDRWRLTVFYG 65
Query: 191 SPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFER 310
P R + W L N LPWL VGDFN ++ E+
Sbjct: 66 FPAVQDREKSWILLDQLGHHNQLPWLCVGDFNEILSTDEK 105
>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
Length = 1765
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +2
Query: 14 QIGYDGVLRVDAQGFADGIWLLWRTAEVIVYPISLNPQHITVEICRRGEEP-WILSAIYA 190
++G G V ++G + G+ L W + V V +N ++I + EEP W ++ +Y
Sbjct: 520 RLGLRGFTGVSSEGMSGGLALYWDES-VSVDVKDINKRYIDAYVQLSPEEPQWHVTFVYG 578
Query: 191 SPNYSRRLRLWQDLGTFAQTNNLPWLLVGDFNSTCASFE 307
P R R+W L T Q+++LPW ++GDFN T FE
Sbjct: 579 EPRVENRHRMWSLLRTIHQSSSLPWAVIGDFNETMWQFE 617