BLASTX nr result

ID: Rheum21_contig00038532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00038532
         (274 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ07522.1| hypothetical protein PRUPE_ppa002479mg [Prunus pe...    69   6e-10
emb|CBI34556.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_006427813.1| hypothetical protein CICLE_v10025084mg [Citr...    60   4e-07
ref|XP_006427812.1| hypothetical protein CICLE_v10025084mg [Citr...    60   4e-07
ref|XP_006585325.1| PREDICTED: WD repeat-containing protein 44-l...    58   1e-06
ref|XP_002297958.2| hypothetical protein POPTR_0001s11110g [Popu...    56   4e-06
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207...    56   6e-06

>gb|EMJ07522.1| hypothetical protein PRUPE_ppa002479mg [Prunus persica]
          Length = 668

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 49/118 (41%), Positives = 58/118 (49%), Gaps = 29/118 (24%)
 Frame = -3

Query: 269 KHPRSTNSCEYFHSQGASVALPWGGLEPAHRLCTHPS---CSQ-----EP---------- 144
           K  RS  SCE+F  +G SVA+PW G+ P  R     S   CSQ     EP          
Sbjct: 537 KQIRSVKSCEHFFCEGVSVAVPWSGMRPEQRSLETASGRYCSQRQGHLEPAYGSRDAERF 596

Query: 143 -LPKW-----PSRVTATWPEELLPVVSPR----RDCRCDGPQSP-TWGLVIVTATCDG 3
            L  W     P R +ATWPEE LP  +P+    +    + P  P TWGLVIVTA CDG
Sbjct: 597 SLGSWLFSNGPCRGSATWPEEELPPRAPQHQDHQHHHHNHPARPDTWGLVIVTAGCDG 654


>emb|CBI34556.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
 Frame = -3

Query: 248 SCEYFHSQGASVALPWGGLEPAHRLCTHPSCSQEPLPKWPSRVTATWPEELLPVVSP--- 78
           SCE F S  A++A+PW G++     C  P+ + + LP    R +ATWPEE LP  SP   
Sbjct: 561 SCESFLSHNATIAIPWCGMKTTTETCPSPTLTTKSLP----RGSATWPEEKLPDSSPFSP 616

Query: 77  ----------RRDCRCDGPQSPTWGLVIVTATCDG 3
                     +  C+       TWGLVIVTA  DG
Sbjct: 617 SMRRSEYKFLKSACQNTASSPHTWGLVIVTAGWDG 651


>ref|XP_006427813.1| hypothetical protein CICLE_v10025084mg [Citrus clementina]
           gi|557529803|gb|ESR41053.1| hypothetical protein
           CICLE_v10025084mg [Citrus clementina]
          Length = 572

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/133 (35%), Positives = 57/133 (42%), Gaps = 44/133 (33%)
 Frame = -3

Query: 269 KHPRSTNSCEYFHSQGASVALPWGGLEPAHR-LCTHP--SCSQE---------------- 147
           K   S  SCE+F S+G SVA+ W G+    + LC+     CSQ+                
Sbjct: 426 KQKNSVRSCEHFFSEGVSVAVQWPGIGTEQKSLCSSSLRDCSQKWDNLETAPWIRDSERF 485

Query: 146 PLPKW-----PSRVTATWPEELLPV--VSPRRDCRCDGPQ------------------SP 42
            L  W     P R +ATWP E LP+  V+   D  C  PQ                  S 
Sbjct: 486 SLGSWFSNDGPCRGSATWPAEKLPLWDVTIDGDGYCQDPQQQRLQQQCLNNVDDVRAISA 545

Query: 41  TWGLVIVTATCDG 3
           TWGLVIVTA CDG
Sbjct: 546 TWGLVIVTAGCDG 558


>ref|XP_006427812.1| hypothetical protein CICLE_v10025084mg [Citrus clementina]
           gi|568820182|ref|XP_006464607.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X1 [Citrus
           sinensis] gi|568820184|ref|XP_006464608.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X2 [Citrus
           sinensis] gi|568820186|ref|XP_006464609.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X3 [Citrus
           sinensis] gi|568820188|ref|XP_006464610.1| PREDICTED: WD
           repeat-containing protein 44-like isoform X4 [Citrus
           sinensis] gi|557529802|gb|ESR41052.1| hypothetical
           protein CICLE_v10025084mg [Citrus clementina]
          Length = 667

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/133 (35%), Positives = 57/133 (42%), Gaps = 44/133 (33%)
 Frame = -3

Query: 269 KHPRSTNSCEYFHSQGASVALPWGGLEPAHR-LCTHP--SCSQE---------------- 147
           K   S  SCE+F S+G SVA+ W G+    + LC+     CSQ+                
Sbjct: 521 KQKNSVRSCEHFFSEGVSVAVQWPGIGTEQKSLCSSSLRDCSQKWDNLETAPWIRDSERF 580

Query: 146 PLPKW-----PSRVTATWPEELLPV--VSPRRDCRCDGPQ------------------SP 42
            L  W     P R +ATWP E LP+  V+   D  C  PQ                  S 
Sbjct: 581 SLGSWFSNDGPCRGSATWPAEKLPLWDVTIDGDGYCQDPQQQRLQQQCLNNVDDVRAISA 640

Query: 41  TWGLVIVTATCDG 3
           TWGLVIVTA CDG
Sbjct: 641 TWGLVIVTAGCDG 653


>ref|XP_006585325.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 495

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 36/125 (28%)
 Frame = -3

Query: 269 KHPRSTNSCEYFHSQGASVALPWGGLEP---------AHRLCTHPSCSQEPLPK------ 135
           K  +S  SCEYF S+G +VA+PW G++          +HR    P+   E  P+      
Sbjct: 358 KQTKSERSCEYFFSKGVTVAIPWSGMKADQRDSSGNYSHRSSEMPTQQLEVAPETRDHEL 417

Query: 134 -----W-----PSRVTATWPEELLP-----------VVSPRRDCRCDGPQSPTWGLVIVT 18
                W       R + TWPEE LP            +S + +C  D   S TWGL IV 
Sbjct: 418 FSLGNWFTTDGSCRGSMTWPEEKLPSWDLPIAEEDQQLSHKDNCH-DRSVSETWGLSIVA 476

Query: 17  ATCDG 3
           A CDG
Sbjct: 477 AGCDG 481


>ref|XP_002297958.2| hypothetical protein POPTR_0001s11110g [Populus trichocarpa]
           gi|550346998|gb|EEE82763.2| hypothetical protein
           POPTR_0001s11110g [Populus trichocarpa]
          Length = 716

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 20/106 (18%)
 Frame = -3

Query: 260 RSTNSCEYFHSQGASVALPWGGLEPAH--RLCTHP----SCSQEPLPKWPSRVTATWPEE 99
           ++  SCE F SQ ASVA+PW G+E     RL + P    S ++  L +  +R +ATWPEE
Sbjct: 597 KNIQSCESFMSQNASVAIPWRGIETIEQKRLSSSPSVCFSLARGFLLESLTRGSATWPEE 656

Query: 98  LLPVVSPR--------------RDCRCDGPQSPTWGLVIVTATCDG 3
            LP  SP+              ++   +   S  WGLVIVTA  DG
Sbjct: 657 KLPNSSPKAASPPKSRPEFKYLKNACQNMLSSHMWGLVIVTAGWDG 702


>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
           gi|449507515|ref|XP_004163054.1| PREDICTED:
           uncharacterized LOC101207772 [Cucumis sativus]
          Length = 668

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/140 (30%), Positives = 53/140 (37%), Gaps = 51/140 (36%)
 Frame = -3

Query: 269 KHPRSTNSCEYFHSQGASVALPWGGLEPAHRLCTHPSCSQE------------------- 147
           K  +S  SCE+F S G SVA+PW G+       T P+C                      
Sbjct: 521 KEAKSQQSCEHFFSDGVSVAIPWSGVG------TEPNCFSNNQALFSNRKNYQRAASWTR 574

Query: 146 -----PLPKWPS-----RVTATWPEELLPV----------------------VSPRRDCR 63
                 L  W S     R +ATWPEE LP+                      ++  RD  
Sbjct: 575 ETDRFSLSNWFSADGLFRGSATWPEERLPLWDLPITEDENGSLQHHDCHQKKLNSHRDAH 634

Query: 62  CDGPQSPTWGLVIVTATCDG 3
            DG Q  TWGLV+V A  DG
Sbjct: 635 NDGSQLETWGLVMVVAGLDG 654


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