BLASTX nr result
ID: Rheum21_contig00038456
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00038456 (350 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 122 6e-26 dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 119 4e-25 gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 119 5e-25 gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 115 6e-24 gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 102 7e-20 dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 96 5e-18 emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 94 1e-17 dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 94 2e-17 dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 93 3e-17 emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 93 4e-17 emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 92 7e-17 gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 91 1e-16 gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 89 6e-16 emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 88 1e-15 emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 87 2e-15 gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana] 87 3e-15 gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 86 4e-15 emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 82 6e-14 emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 82 9e-14 emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 81 2e-13 >gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1156 Score = 122 bits (305), Expect = 6e-26 Identities = 60/115 (52%), Positives = 81/115 (70%) Frame = +2 Query: 5 DNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPVI 184 D +RT+IG+GE+R GVY+L + ++ HT+ S+ + H+RLGHPSF VLSSLPV+ Sbjct: 52 DRFSRTLIGSGEERDGVYYLTDVATAK--IHTAKVSSDQALWHQRLGHPSFSVLSSLPVL 109 Query: 185 GNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 +S +SV CD+CF+AKQTR FPVS NK + F L+HCDVW PY +PS+ G Sbjct: 110 TSS-SLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCG 163 >dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1491 Score = 119 bits (298), Expect = 4e-25 Identities = 59/116 (50%), Positives = 75/116 (64%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD +RT+IG GE+R GVY+L ++ H +T + + H+RLGHPSF VLSSLP+ Sbjct: 473 QDRFSRTLIGTGEERDGVYYLTDAATTT--VHKVDVTTDHALWHQRLGHPSFSVLSSLPL 530 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 S SV CD+CF+AKQTR FP S NK D F L+HCDVW PY +PS+ G Sbjct: 531 FSGS-SCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG 585 >gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1413 Score = 119 bits (297), Expect = 5e-25 Identities = 59/116 (50%), Positives = 75/116 (64%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD +RT+IG GE+R GVY+L ++ H +T + + H+RLGHPSF VLSSLP+ Sbjct: 473 QDRFSRTLIGTGEERDGVYYLTDAATTT--VHKVDITTDHALWHQRLGHPSFSVLSSLPL 530 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 S SV CD+CF+AKQTR FP S NK D F L+HCDVW PY +PS+ G Sbjct: 531 FSGS-SCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCG 585 >gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1501 Score = 115 bits (288), Expect = 6e-24 Identities = 55/116 (47%), Positives = 77/116 (66%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD ++T+IG+GE+RGGVY+L + + HT+ + + H+RLGHPSF VLSSLP+ Sbjct: 490 QDRSSKTLIGSGEERGGVYYLTDVTPAK--IHTANVDSDQALWHQRLGHPSFSVLSSLPL 547 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 + H+ CD+CF+AKQTR FP S NK + F L+HCDVW PY +P++ G Sbjct: 548 FSKTSSTVTSHS-CDVCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCG 602 >gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1496 Score = 102 bits (253), Expect = 7e-20 Identities = 54/116 (46%), Positives = 70/116 (60%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD RT+IGAGE+R GVY+ + + +S + + HRRLGHPS VL SLP Sbjct: 460 QDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPE 519 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 S + K CD CF++KQTR FP+S+NK + F L+H DVW PY PST+G Sbjct: 520 CNRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTG 575 >dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1098 Score = 95.9 bits (237), Expect = 5e-18 Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 2/118 (1%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSA--RACHTSAASTLYYI*HRRLGHPSFVVLSSL 175 QD TRT+IGAGE+R GVY+ + ++ + S+++TL+ H RLGHPS VL S Sbjct: 464 QDRFTRTLIGAGEEREGVYYFTGVLAARVNKGFKESSSATLW---HHRLGHPSTGVLLSF 520 Query: 176 PVIGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 P +S CDIC++AKQ R F S NK F+L+HCDVW PY P++ G Sbjct: 521 PEFASSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASCG 578 >emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] Length = 1316 Score = 94.4 bits (233), Expect = 1e-17 Identities = 46/116 (39%), Positives = 68/116 (58%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD +R IG G+ R GVY+ + L + Y + HRRLGHPS VL+S+ Sbjct: 349 QDRTSRNPIGVGKLRNGVYYYKPL--QGEKVNAVKVEEKYELWHRRLGHPSDRVLASIHS 406 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 +GN+V ++ CD C + KQ RN F +S+ + ++F+L+H D+W PY P+TSG Sbjct: 407 LGNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPTTSG 462 >dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1109 Score = 94.0 bits (232), Expect = 2e-17 Identities = 51/116 (43%), Positives = 68/116 (58%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD TR V G G++ G + R + +A A HTS + + + HRRLGH S +++ LP Sbjct: 252 QDRTTRMVTGIGKRENGSFCFRGM-ENAAAVHTSVKAP-FDLWHRRLGHASDKIVNLLPR 309 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 S + CD C +AKQTR+ FP+SDN+ D F L+HCDVW PY PS SG Sbjct: 310 ELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSG 365 >dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1462 Score = 93.2 bits (230), Expect = 3e-17 Identities = 51/116 (43%), Positives = 69/116 (59%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD IT T+IGAG+Q+ G+Y+ R + A ++S L+ H RLGHPS VL L Sbjct: 432 QDRITLTLIGAGKQQNGLYFFRGTETVASMTRMDSSSQLW---HCRLGHPSSKVLKLLS- 487 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 +S + C+IC KAKQTR+ FP+S+NK F++VHCD+W PY S G Sbjct: 488 FSDSTGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWGPYRTTSICG 543 >emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] Length = 1109 Score = 92.8 bits (229), Expect = 4e-17 Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 1/117 (0%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD I+R +IG GEQ G+Y+L+ + TS AS Y + HRR+GHPS V+ + Sbjct: 284 QDRISRMLIGVGEQCEGLYFLKGVAPIRAYKTTSIAS--YELWHRRMGHPSSRVVDLIXE 341 Query: 182 IGNSVKVS-VKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 + + + K+ CDICF+A+QTR F SDNK + FDL+HCD+W Y +P++ G Sbjct: 342 VDSVGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECFDLIHCDLWGAYRVPASCG 398 >emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana] gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana] Length = 1109 Score = 92.0 bits (227), Expect = 7e-17 Identities = 50/116 (43%), Positives = 67/116 (57%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD TR V G G++ G + R + +A A HTS + + + HRRLGH S +++ LP Sbjct: 252 QDRTTRMVTGIGKRENGSFCFRGM-ENAAAVHTSVKAP-FDLWHRRLGHASDKIVNLLPR 309 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 S + CD C +AKQTR+ FP+ DN+ D F L+HCDVW PY PS SG Sbjct: 310 ELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPSYSG 365 >gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1333 Score = 91.3 bits (225), Expect = 1e-16 Identities = 47/116 (40%), Positives = 68/116 (58%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD +R V+GAG + GG + R + A T Y + H R+GHP+ V+S +P Sbjct: 352 QDRTSRMVMGAGRRVGGTFHFRS--TEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPE 409 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 SV + + CD+C +AKQTRN FP+S NK +F+L++CD+W PY PS +G Sbjct: 410 SSVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTG 465 >gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana] Length = 1468 Score = 89.0 bits (219), Expect = 6e-16 Identities = 49/115 (42%), Positives = 66/115 (57%) Frame = +2 Query: 5 DNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPVI 184 D TR V G++ G + R + +A A HTS + + + HRRLGH S +++ LP Sbjct: 477 DRTTRMVTRIGKRENGSFCFRGM-ENAAAVHTSVKAP-FDLWHRRLGHASDKIVNLLPRE 534 Query: 185 GNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 S + CD C +AKQTR+ FP+SDN+ D F L+HCDVW PY PS SG Sbjct: 535 LLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSG 589 >emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] Length = 758 Score = 88.2 bits (217), Expect = 1e-15 Identities = 51/120 (42%), Positives = 71/120 (59%), Gaps = 4/120 (3%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSL-- 175 QD +R +IG G+Q G+Y+L+ + T AS Y + HRR+GHPS V+ + Sbjct: 213 QDRNSRMLIGTGKQCEGLYFLKGVALICAYETTGIAS--YELWHRRMGHPSSRVVDLIYE 270 Query: 176 --PVIGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 V GN VK+ CDICF+A+QTR F SDNK + FDL+HCD+W Y +P++ G Sbjct: 271 VDSVGGND---GVKNKFCDICFRAQQTREVFFSSDNKVKECFDLIHCDLWGAYRVPTSCG 327 >emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] Length = 1157 Score = 87.0 bits (214), Expect = 2e-15 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 1/116 (0%) Frame = +2 Query: 5 DNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPVI 184 D+ +R +IGAGEQR G+Y+L+ + TS AS Y + +RR+GHPS ++ + + Sbjct: 378 DHNSRMLIGAGEQREGLYFLKGVTPIRAYKTTSIAS--YELWNRRMGHPSSKIVDLIYEV 435 Query: 185 GNSVKVS-VKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 + + VK+ CDI F+A+QTR F SDNK + FDL+HCD+W Y +P++ G Sbjct: 436 DSVGRNDGVKNKFCDIFFRAQQTREVFFSSDNKAKECFDLIHCDLWGAYRVPASCG 491 >gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana] Length = 1158 Score = 86.7 bits (213), Expect = 3e-15 Identities = 48/106 (45%), Positives = 61/106 (57%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD IT+T+IGAGEQ G+Y+ R L +A H ST + HRRLGHPS + L Sbjct: 263 QDRITKTLIGAGEQLNGLYFFRGLGVAAPVQHKD--STPIDVWHRRLGHPSSKAMEMLKF 320 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVW 319 S C+IC AKQTR+ FP+S NK F+L+HCD+W Sbjct: 321 SDFSSS-GFDSKDCEICISAKQTRDSFPLSSNKTSFAFELIHCDLW 365 >gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana] Length = 1486 Score = 86.3 bits (212), Expect = 4e-15 Identities = 48/116 (41%), Positives = 65/116 (56%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD T +IGAG + G+Y+ R + ++A TS A + H+RLGHPS L LP Sbjct: 467 QDRTTLMLIGAGRELNGLYFFRGVETAAAV--TSKALPSSQLWHQRLGHPSSKALHLLP- 523 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 + + C+IC +AKQTR+ FP+S NK F+LVHCD+W PY S G Sbjct: 524 FSDVTSSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICG 579 >emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] Length = 1129 Score = 82.4 bits (202), Expect = 6e-14 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 3/115 (2%) Frame = +2 Query: 14 TRTVIGAGEQRGGVYWLRMLCSSARACHTS---AASTLYYI*HRRLGHPSFVVLSSLPVI 184 TR +IG G +R G+Y+ H S AASTL + H R+GHPS V+ LP++ Sbjct: 225 TRELIGTGVRRDGLYYFGG-AEGDSVQHVSVHNAASTLE-LWHNRMGHPSEKVVKLLPLV 282 Query: 185 GNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 N +K S+ A C+ICF+AK R+ FP+SDNK +F+ +HCD+W Y S+ G Sbjct: 283 SN-IKGSLNKA-CEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWASYKHVSSCG 335 >emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] Length = 1461 Score = 81.6 bits (200), Expect = 9e-14 Identities = 50/116 (43%), Positives = 61/116 (52%) Frame = +2 Query: 2 QDNITRTVIGAGEQRGGVYWLRMLCSSARACHTSAASTLYYI*HRRLGHPSFVVLSSLPV 181 QD TR IG G+Q G+Y+L + A A S L+ H+RLGHPS L L Sbjct: 500 QDATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHSDLW---HQRLGHPSSGPLQVLAK 556 Query: 182 IGNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 + + KH CDIC AKQTR FP S FDL+HCD+W P+ I S SG Sbjct: 557 VNPKIYFDSKHV-CDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSG 611 >emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] Length = 1099 Score = 80.9 bits (198), Expect = 2e-13 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 3/115 (2%) Frame = +2 Query: 14 TRTVIGAGEQRGGVYWLRMLCSSARACHTS---AASTLYYI*HRRLGHPSFVVLSSLPVI 184 TR +IG G +R G+Y+ H S AASTL + H+R+GHPS V+ LP + Sbjct: 144 TRELIGTGVRRDGLYYFGG-AEGDSVQHVSVHNAASTLE-LWHKRMGHPSEKVVKLLPPV 201 Query: 185 GNSVKVSVKHAPCDICFKAKQTRNYFPVSDNKDGDLFDLVHCDVWRPYSIPSTSG 349 N +K S+ A C+ICF+AK R+ FP+SDNK +F+ +HCD+W Y S+ G Sbjct: 202 SN-LKGSLNKA-CEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCG 254