BLASTX nr result

ID: Rheum21_contig00038422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00038422
         (307 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266973.2| PREDICTED: U-box domain-containing protein 3...    63   5e-08
emb|CBI38656.3| unnamed protein product [Vitis vinifera]               63   5e-08
emb|CAN78862.1| hypothetical protein VITISV_021538 [Vitis vinifera]    63   5e-08
ref|XP_002534671.1| hypothetical protein RCOM_2090500 [Ricinus c...    57   3e-06
ref|XP_004307786.1| PREDICTED: U-box domain-containing protein 3...    56   6e-06

>ref|XP_002266973.2| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 804

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   SRKVKGQMLSTMISECAPGFCTVYVVCKGKLESLRPSEAEMIGNI 136
           SRKVKGQ LS  ISEC P FCTVY V KG+L S+RPS+++  G+I
Sbjct: 148 SRKVKGQSLSLRISECTPSFCTVYTVSKGQLSSVRPSDSDKNGSI 192


>emb|CBI38656.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   SRKVKGQMLSTMISECAPGFCTVYVVCKGKLESLRPSEAEMIGNI 136
           SRKVKGQ LS  ISEC P FCTVY V KG+L S+RPS+++  G+I
Sbjct: 148 SRKVKGQSLSLRISECTPSFCTVYTVSKGQLSSVRPSDSDKNGSI 192


>emb|CAN78862.1| hypothetical protein VITISV_021538 [Vitis vinifera]
          Length = 804

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   SRKVKGQMLSTMISECAPGFCTVYVVCKGKLESLRPSEAEMIGNI 136
           SRKVKGQ LS  ISEC P FCTVY V KG+L S+RPS+++  G+I
Sbjct: 148 SRKVKGQSLSLRISECTPSFCTVYTVSKGQLSSVRPSDSDKNGSI 192


>ref|XP_002534671.1| hypothetical protein RCOM_2090500 [Ricinus communis]
           gi|223524795|gb|EEF27713.1| hypothetical protein
           RCOM_2090500 [Ricinus communis]
          Length = 364

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +2

Query: 2   SRKVKGQMLSTMISECAPGFCTVYVVCKGKLESLRPSEAEMIGN 133
           +RK KG  LS+ IS+C P FCTVY V KGKL S+RPS+ E  G+
Sbjct: 148 TRKPKGNNLSSRISDCIPNFCTVYAVSKGKLSSIRPSDLETNGS 191


>ref|XP_004307786.1| PREDICTED: U-box domain-containing protein 35-like [Fragaria vesca
           subsp. vesca]
          Length = 810

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = +2

Query: 2   SRKVKGQMLSTMISECAPGFCTVYVVCKGKLESLRPSEAEMIGN 133
           +RK KG  LS  IS C PGFCTVY V KGKL SLRPS+++ +G+
Sbjct: 148 TRKQKG--LSPKISACIPGFCTVYAVSKGKLSSLRPSDSQSVGS 189


Top