BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00038361
         (478 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, part...   105   6e-21
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...   105   6e-21
ref|NP_178215.1| zinc ion binding / nucleic acid binding protein...   105   6e-21
ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, part...   103   2e-20
ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, part...   102   4e-20
ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Caps...   102   5e-20
ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, part...   102   5e-20
ref|XP_006295736.1| hypothetical protein CARUB_v10024855mg [Caps...   102   5e-20
ref|XP_006301503.1| hypothetical protein CARUB_v10021929mg, part...   100   2e-19
ref|XP_006294233.1| hypothetical protein CARUB_v10023230mg, part...   100   2e-19
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...   100   3e-19
ref|XP_006282338.1| hypothetical protein CARUB_v10028633mg, part...   100   3e-19
ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, part...    99   4e-19
dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like...    99   6e-19
ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, part...    99   6e-19
ref|XP_006285575.1| hypothetical protein CARUB_v10007019mg [Caps...    99   6e-19
ref|XP_006301986.1| hypothetical protein CARUB_v10022467mg, part...    99   8e-19
ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, part...    99   8e-19
ref|XP_006286623.1| hypothetical protein CARUB_v10002432mg, part...    99   8e-19
ref|XP_006301940.1| hypothetical protein CARUB_v10022418mg, part...    98   1e-18

>ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, partial [Capsella rubella]
           gi|482565486|gb|EOA29675.1| hypothetical protein
           CARUB_v10015822mg, partial [Capsella rubella]
          Length = 333

 Score =  105 bits (262), Expect = 6e-21
 Identities = 44/74 (59%), Positives = 59/74 (79%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA  +G P+RVDL T   +R +FARICVE+D+++PL GS++VNGD+ F+ YEGL  IC 
Sbjct: 182 GIAEGLGKPLRVDLTTFRFERARFARICVEVDLTQPLKGSVMVNGDRYFVSYEGLSNICS 241

Query: 200 NCGLYGHLVDKCPT 241
           +CGLYGHLV+ CP+
Sbjct: 242 SCGLYGHLVNTCPS 255


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score =  105 bits (262), Expect = 6e-21
 Identities = 42/73 (57%), Positives = 59/73 (80%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIAA +G P++VDL TL  +RG+FAR+CVE+++  PL G+++VNG++ F+ YEGLQTIC 
Sbjct: 200 GIAAGLGKPIKVDLTTLRKERGRFARVCVEVNLKNPLKGTLVVNGERYFVSYEGLQTICS 259

Query: 200 NCGLYGHLVDKCP 238
            CG+YGH V+ CP
Sbjct: 260 LCGIYGHTVNNCP 272


>ref|NP_178215.1| zinc ion binding / nucleic acid binding protein [Arabidopsis
           thaliana] gi|6598620|gb|AAF18653.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250297|gb|AEC05391.1| zinc
           ion binding / nucleic acid binding protein [Arabidopsis
           thaliana]
          Length = 515

 Score =  105 bits (262), Expect = 6e-21
 Identities = 42/95 (44%), Positives = 68/95 (71%), Gaps = 8/95 (8%)
 Frame = +2

Query: 23  IAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICYN 202
           IA  +G P++VD+NT+N D+G+FAR+C+E+++++PL G++++NGD+ F+ YEGL  IC +
Sbjct: 186 IARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYFVAYEGLSKICSS 245

Query: 203 CGLYGHLVDKCP--------TPAPVITDKTIIAGG 283
           CG+YGHLV  CP          A  +TD+ ++  G
Sbjct: 246 CGIYGHLVHSCPRNVVVKVSAGAETVTDRAVVPVG 280


>ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, partial [Capsella rubella]
           gi|482568590|gb|EOA32779.1| hypothetical protein
           CARUB_v10016088mg, partial [Capsella rubella]
          Length = 340

 Score =  103 bits (257), Expect = 2e-20
 Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA  +G+P++VDL TL  +R +FARICVE+D+  PL G+I++NG++ F+ YEGL TIC 
Sbjct: 185 GIAEGLGTPIKVDLTTLQFERARFARICVEVDLKNPLKGTILINGERYFVSYEGLTTICS 244

Query: 200 NCGLYGHLVDKCP--TPAPVITDKTIIAGG 283
            CG+YGHLV  CP      V     +++GG
Sbjct: 245 KCGMYGHLVHACPLVVKENVSVHAQVVSGG 274


>ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, partial [Capsella rubella]
           gi|482547819|gb|EOA12095.1| hypothetical protein
           CARUB_v10016517mg, partial [Capsella rubella]
          Length = 457

 Score =  102 bits (255), Expect = 4e-20
 Identities = 40/73 (54%), Positives = 59/73 (80%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA+ +G P++VD+ TLN +R +FAR+CVEI++S+P+ GS+++NGD+ ++ YEGL  IC 
Sbjct: 181 GIASGLGKPIKVDVTTLNFERARFARVCVEINLSKPVKGSVMINGDRYYVAYEGLSNICS 240

Query: 200 NCGLYGHLVDKCP 238
            CG+YGHLV  CP
Sbjct: 241 GCGVYGHLVHNCP 253


>ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Capsella rubella]
           gi|482565484|gb|EOA29673.1| hypothetical protein
           CARUB_v10015820mg [Capsella rubella]
          Length = 503

 Score =  102 bits (254), Expect = 5e-20
 Identities = 41/87 (47%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA+ +G PV+VDL TL+ +R +FAR+CVE+++S+PL GS+++NG++ ++ YEG+  IC 
Sbjct: 185 GIASGLGKPVKVDLTTLHIERARFARVCVEVNLSKPLKGSVMINGERYYVAYEGMSNICS 244

Query: 200 NCGLYGHLVDKCP-TPAPVITDKTIIA 277
            CG++GHLV  CP  P   + ++ I+A
Sbjct: 245 GCGVFGHLVHNCPRRPVEPVVEQPIVA 271


>ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, partial [Capsella rubella]
           gi|482565360|gb|EOA29549.1| hypothetical protein
           CARUB_v10015577mg, partial [Capsella rubella]
          Length = 476

 Score =  102 bits (254), Expect = 5e-20
 Identities = 41/87 (47%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA+ +G PV+VDL TL+ +R +FAR+CVE+++S+PL GS+++NG++ ++ YEG+  IC 
Sbjct: 185 GIASGLGKPVKVDLTTLHIERARFARVCVEVNLSKPLKGSVMINGERYYVAYEGMSNICS 244

Query: 200 NCGLYGHLVDKCP-TPAPVITDKTIIA 277
            CG++GHLV  CP  P   + ++ I+A
Sbjct: 245 GCGVFGHLVHNCPRRPVEPVVEQPIVA 271


>ref|XP_006295736.1| hypothetical protein CARUB_v10024855mg [Capsella rubella]
           gi|482564444|gb|EOA28634.1| hypothetical protein
           CARUB_v10024855mg [Capsella rubella]
          Length = 479

 Score =  102 bits (254), Expect = 5e-20
 Identities = 42/76 (55%), Positives = 59/76 (77%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           G+A  +G P++VDLNT+N +  +FARICVE+D+ +PL G+I++NGD+ F+ YEGL +IC 
Sbjct: 174 GMAQGLGRPLKVDLNTMNIECARFARICVEVDLRKPLKGAIMINGDRYFVSYEGLNSICS 233

Query: 200 NCGLYGHLVDKCPTPA 247
            CG+YGHLV  CP  A
Sbjct: 234 GCGVYGHLVHSCPRRA 249


>ref|XP_006301503.1| hypothetical protein CARUB_v10021929mg, partial [Capsella rubella]
           gi|482570213|gb|EOA34401.1| hypothetical protein
           CARUB_v10021929mg, partial [Capsella rubella]
          Length = 477

 Score =  100 bits (250), Expect = 2e-19
 Identities = 41/87 (47%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA+ +G PV+VDL TL+ +R +FARICVE+++S+PL GS++++G++ ++ YEG+  IC 
Sbjct: 186 GIASGLGKPVKVDLTTLHIERARFARICVEVNLSKPLKGSVMISGERYYVAYEGMSNICS 245

Query: 200 NCGLYGHLVDKCP-TPAPVITDKTIIA 277
            CG++GHLV  CP  P   + ++ I+A
Sbjct: 246 GCGVFGHLVHNCPRRPVEPVVEQPIVA 272


>ref|XP_006294233.1| hypothetical protein CARUB_v10023230mg, partial [Capsella rubella]
           gi|482562941|gb|EOA27131.1| hypothetical protein
           CARUB_v10023230mg, partial [Capsella rubella]
          Length = 440

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 6/93 (6%)
 Frame = +2

Query: 23  IAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICYN 202
           IA  +G P++VD+ TLN DR +FARICVE++++ PL G+I++N ++ ++ YEGL  IC  
Sbjct: 186 IATGLGKPIKVDMATLNFDRARFARICVEVNLAYPLKGTIMINAERYYVAYEGLTNICSL 245

Query: 203 CGLYGHLVDKCPTPAPVI------TDKTIIAGG 283
           CGLYGHLV  CP   PV+      T  T++ GG
Sbjct: 246 CGLYGHLVHACPAGKPVMPVTEKETTATVVPGG 278


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score =  100 bits (248), Expect = 3e-19
 Identities = 37/73 (50%), Positives = 59/73 (80%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA ++G PV+VD+ TL+ +R +FAR+C+E+D+++PL G++++NG++ F+ YEGL  IC 
Sbjct: 160 GIAGSLGKPVKVDMTTLHVERARFARMCIEVDLAKPLKGTLLLNGERYFVSYEGLANICS 219

Query: 200 NCGLYGHLVDKCP 238
            CG+YGHL+  CP
Sbjct: 220 RCGMYGHLIHTCP 232


>ref|XP_006282338.1| hypothetical protein CARUB_v10028633mg, partial [Capsella rubella]
           gi|482551042|gb|EOA15236.1| hypothetical protein
           CARUB_v10028633mg, partial [Capsella rubella]
          Length = 463

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 40/73 (54%), Positives = 58/73 (79%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           G+A A+G P+RVD NTLN +R +F R+CVE+D+S+PL GS ++NG++ F+ YEGL +IC 
Sbjct: 183 GLAQALGKPLRVDTNTLNFERARFPRVCVEVDLSQPLKGSFMLNGERYFVFYEGLTSICS 242

Query: 200 NCGLYGHLVDKCP 238
            CG++GH+V  CP
Sbjct: 243 GCGIFGHMVHACP 255


>ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, partial [Capsella rubella]
           gi|482555545|gb|EOA19737.1| hypothetical protein
           CARUB_v10003838mg, partial [Capsella rubella]
          Length = 391

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 40/74 (54%), Positives = 56/74 (75%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA  +G P++VDL T N  R +FAR+CVE+++  PL GS+++NG++ ++ YEGL TIC 
Sbjct: 185 GIAEGLGKPIKVDLTTTNFSRARFARVCVEVNLKMPLKGSVMINGERYYVSYEGLSTICS 244

Query: 200 NCGLYGHLVDKCPT 241
            CGLYGHLV  CP+
Sbjct: 245 CCGLYGHLVHTCPS 258


>dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 591

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 39/72 (54%), Positives = 56/72 (77%)
 Frame = +2

Query: 23  IAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICYN 202
           +A  +G P++VDL  L+ +RG+FAR+CVE+D+ RPL G+++VNGD+ ++ YEGL  IC  
Sbjct: 186 VAQGLGRPLKVDLTMLHFERGRFARVCVEVDLKRPLQGALLVNGDRYYVAYEGLTNICSK 245

Query: 203 CGLYGHLVDKCP 238
           CG+YGHLV  CP
Sbjct: 246 CGIYGHLVHNCP 257


>ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, partial [Capsella rubella]
           gi|482564602|gb|EOA28792.1| hypothetical protein
           CARUB_v10025024mg, partial [Capsella rubella]
          Length = 507

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 39/73 (53%), Positives = 55/73 (75%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA A+G P+R DL TL  +R +FAR+C+E+++ +PL GS++VNG++    YEGL TIC 
Sbjct: 203 GIAEALGKPLRADLTTLQVERARFARVCIEVNLKKPLKGSVMVNGERYMASYEGLNTICS 262

Query: 200 NCGLYGHLVDKCP 238
           +CG+YGHL   CP
Sbjct: 263 SCGIYGHLASVCP 275


>ref|XP_006285575.1| hypothetical protein CARUB_v10007019mg [Capsella rubella]
           gi|482554280|gb|EOA18473.1| hypothetical protein
           CARUB_v10007019mg [Capsella rubella]
          Length = 311

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 43/86 (50%), Positives = 62/86 (72%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           G+A  +G P+++ LNT+N +R +FARICVE+D+ +PL G I++NGD+ F+ YEGL  IC 
Sbjct: 172 GMARGLGRPLKLYLNTMNIERARFARICVEVDLRKPLKGKIMINGDRYFVSYEGLNLICS 231

Query: 200 NCGLYGHLVDKCPTPAPVITDKTIIA 277
             G+YGHLV  CP  AP   +K ++A
Sbjct: 232 GYGVYGHLVHSCPRRAP---EKEVVA 254


>ref|XP_006301986.1| hypothetical protein CARUB_v10022467mg, partial [Capsella rubella]
           gi|482570696|gb|EOA34884.1| hypothetical protein
           CARUB_v10022467mg, partial [Capsella rubella]
          Length = 421

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 42/78 (53%), Positives = 59/78 (75%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           G+A A+G P+RVD NTLN +R +FAR+CVE+D+S+PL  S +VNG++ F+ YEGL +IC 
Sbjct: 172 GLAQALGKPLRVDANTLNFERPRFARVCVEVDLSQPLKRSFMVNGERYFVFYEGLTSICS 231

Query: 200 NCGLYGHLVDKCPTPAPV 253
            C ++GH+V  CP   PV
Sbjct: 232 GCEIFGHMVHACPKVKPV 249


>ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, partial [Capsella rubella]
           gi|482561670|gb|EOA25861.1| hypothetical protein
           CARUB_v10019240mg, partial [Capsella rubella]
          Length = 405

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 41/73 (56%), Positives = 56/73 (76%)
 Frame = +2

Query: 20  GIAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICY 199
           GIA  +G P++VDL T N DR +FAR+CVE+++ +PL G+I+VN ++ F+ YEGL +IC 
Sbjct: 153 GIAEGLGKPLKVDLTTQNLDRARFARVCVEVNLKKPLKGTIMVNDERFFVSYEGLSSICS 212

Query: 200 NCGLYGHLVDKCP 238
            CGLYGHLV  CP
Sbjct: 213 ACGLYGHLVHACP 225


>ref|XP_006286623.1| hypothetical protein CARUB_v10002432mg, partial [Capsella rubella]
           gi|482555329|gb|EOA19521.1| hypothetical protein
           CARUB_v10002432mg, partial [Capsella rubella]
          Length = 450

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 38/72 (52%), Positives = 58/72 (80%)
 Frame = +2

Query: 23  IAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICYN 202
           ++ A+G P+RVD+ TL  +R +FAR+CVE+++ +PL GS++VNG++  + YEGL TIC +
Sbjct: 183 VSGALGKPLRVDMTTLQLNRARFARVCVEVNLKKPLKGSVLVNGERYAVAYEGLSTICSS 242

Query: 203 CGLYGHLVDKCP 238
           CG+YGHLV+ CP
Sbjct: 243 CGIYGHLVNNCP 254


>ref|XP_006301940.1| hypothetical protein CARUB_v10022418mg, partial [Capsella rubella]
           gi|482570650|gb|EOA34838.1| hypothetical protein
           CARUB_v10022418mg, partial [Capsella rubella]
          Length = 493

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 39/72 (54%), Positives = 55/72 (76%)
 Frame = +2

Query: 23  IAAAIGSPVRVDLNTLNADRGKFARICVEIDISRPLLGSIIVNGDKVFLEYEGLQTICYN 202
           IA  +G P+RVDL TL  DR +FAR+CVE+D+S+PL G++++N ++ ++ YEGL  IC  
Sbjct: 199 IAEGLGKPIRVDLTTLKFDRARFARVCVEVDLSQPLKGTVLINEERYYVSYEGLTNICSG 258

Query: 203 CGLYGHLVDKCP 238
           CG+YGHLV  CP
Sbjct: 259 CGMYGHLVHTCP 270