BLASTX nr result
ID: Rheum21_contig00038269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038269
(387 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006421829.1| hypothetical protein CICLE_v10004587mg [Citr... 112 4e-23
ref|XP_006494379.1| PREDICTED: putative pentatricopeptide repeat... 110 2e-22
ref|XP_004309232.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
gb|EXC11892.1| hypothetical protein L484_005353 [Morus notabilis] 101 1e-19
ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006340527.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
gb|EMJ22266.1| hypothetical protein PRUPE_ppa016304mg [Prunus pe... 94 1e-17
ref|XP_002510857.1| pentatricopeptide repeat-containing protein,... 93 4e-17
ref|XP_004240796.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
gb|EOY23065.1| Pentatricopeptide repeat-containing protein, puta... 87 3e-15
ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
gb|EPS71383.1| hypothetical protein M569_03376, partial [Genlise... 80 2e-13
ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 69 5e-10
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera] 66 4e-09
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_006588340.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S... 58 1e-06
gb|ESW11890.1| hypothetical protein PHAVU_008G067700g [Phaseolus... 58 1e-06
tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide r... 58 1e-06
emb|CBI36755.3| unnamed protein product [Vitis vinifera] 58 1e-06
>ref|XP_006421829.1| hypothetical protein CICLE_v10004587mg [Citrus clementina]
gi|557523702|gb|ESR35069.1| hypothetical protein
CICLE_v10004587mg [Citrus clementina]
Length = 600
Score = 112 bits (281), Expect = 4e-23
Identities = 56/122 (45%), Positives = 74/122 (60%)
Frame = +3
Query: 15 LVSTTVAQKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQ 194
L +++ QK + PIS + IKELH LIRTH H DP +I KA
Sbjct: 11 LTTSSTTQKPKRVSTKPISLNSIKELHANLIRTHLHTDPSSISNVIKSYALSPSYLDKAH 70
Query: 195 IVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAA 374
+VF Q+ERPTLL+FN+MI+ FSQS+ P AI +Y+ + G GDN+ F+FVFKAC R
Sbjct: 71 LVFNQLERPTLLVFNHMIQGFSQSDQPNEAIDMYNNMYHQGFTGDNLTFIFVFKACARVK 130
Query: 375 DL 380
D+
Sbjct: 131 DV 132
>ref|XP_006494379.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Citrus sinensis]
Length = 600
Score = 110 bits (275), Expect = 2e-22
Identities = 55/122 (45%), Positives = 73/122 (59%)
Frame = +3
Query: 15 LVSTTVAQKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQ 194
L +++ QK + PIS + IKELH LIRTH H DP +I KA
Sbjct: 11 LTTSSTTQKPKRVSTKPISLNSIKELHANLIRTHLHTDPSSISNVIKSYALSPSYLDKAH 70
Query: 195 IVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAA 374
+VF Q+ERPTLL+FN+MI+ SQS+ P AI +Y+ + G GDN+ F+FVFKAC R
Sbjct: 71 LVFNQLERPTLLVFNHMIQGLSQSDQPNEAIDMYNNMYHQGFTGDNLTFIFVFKACARVK 130
Query: 375 DL 380
D+
Sbjct: 131 DV 132
>ref|XP_004309232.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 601
Score = 102 bits (254), Expect = 5e-20
Identities = 55/125 (44%), Positives = 73/125 (58%)
Frame = +3
Query: 9 YRLVSTTVAQKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRK 188
+R +STT A + P + + KELH LIRTH H DP +I K
Sbjct: 8 WRHLSTTAAPPKPPITTLAST----KELHAHLIRTHLHKDPSSISDVLRFYTQSPPHLNK 63
Query: 189 AQIVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGR 368
A VF QIE+PTL+++N MIR SQSE P AI +Y R+R GL G+N+ +FVFKAC R
Sbjct: 64 AHFVFNQIEQPTLMVWNLMIRGLSQSEKPSEAIRMYSRMRQQGLVGNNLTCIFVFKACAR 123
Query: 369 AADLL 383
+D++
Sbjct: 124 VSDVV 128
>gb|EXC11892.1| hypothetical protein L484_005353 [Morus notabilis]
Length = 617
Score = 101 bits (251), Expect = 1e-19
Identities = 55/127 (43%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Frame = +3
Query: 12 RLVSTTVAQKRNPTAR---IPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXX 182
R S + A + P AR P + IKELH RLIR+H H DP +I
Sbjct: 9 RFTSKSAAATQQPPARKTQTPTPTNSIKELHARLIRSHLHTDPFSISQIIRAYALSPPNL 68
Query: 183 RKAQIVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKAC 362
KA+ F QIE PTL ++N+MIR SQS+ P AI Y R+ G GDN+ F+FV KAC
Sbjct: 69 SKARFAFDQIEGPTLPLWNHMIRGLSQSDHPNEAIVFYSRMCRQGFVGDNLTFIFVLKAC 128
Query: 363 GRAADLL 383
R +D+L
Sbjct: 129 ARVSDVL 135
>ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/121 (40%), Positives = 71/121 (58%)
Frame = +3
Query: 21 STTVAQKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIV 200
S+++A K ++ IS D KELH LIRT H DP + KA +V
Sbjct: 13 SSSMAPKSGRVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLV 72
Query: 201 FTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAADL 380
F QIE PTL+++N+MIR SQS+ P AI +Y R+ G+ G+N+ +F+FKAC R +D+
Sbjct: 73 FNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDI 132
Query: 381 L 383
+
Sbjct: 133 V 133
>ref|XP_006340527.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Solanum tuberosum]
Length = 595
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/116 (43%), Positives = 66/116 (56%)
Frame = +3
Query: 36 QKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIE 215
QK P + S KELH LIRT KH+DP I KA + F Q E
Sbjct: 15 QKAAPYLKSSNSIASAKELHAHLIRTQKHSDPFVISDVIRFYSLFPTSLHKALVAFNQTE 74
Query: 216 RPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAADLL 383
RPTL I+NYMIR S+S P A+ +YDR+R G G+N+ F+F+FKAC + +D++
Sbjct: 75 RPTLPIWNYMIRGLSKSHRPIEALHMYDRMRQQGFPGNNLTFIFIFKACLQLSDIV 130
>gb|EMJ22266.1| hypothetical protein PRUPE_ppa016304mg [Prunus persica]
Length = 640
Score = 94.4 bits (233), Expect = 1e-17
Identities = 50/107 (46%), Positives = 66/107 (61%)
Frame = +3
Query: 63 PISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIERPTLLIFNY 242
PIS QIKELH LIRT DP ++ KA +VF QIE+PTLLI+N+
Sbjct: 67 PISLTQIKELHAHLIRTQLDKDPSSVSEVVRYYALSPLFLEKALLVFNQIEQPTLLIWNH 126
Query: 243 MIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAADLL 383
MIR SQS AI +Y+R+ GL G+++ F+F+FKAC RA D++
Sbjct: 127 MIRGLSQSGQFSEAIHVYNRMYRQGLAGNHLTFIFIFKACARAPDIV 173
>ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549972|gb|EEF51459.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 641
Score = 92.8 bits (229), Expect = 4e-17
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Frame = +3
Query: 21 STTVAQKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIV 200
S++ +K + S IKE H LIRTH H +P ++ KA
Sbjct: 53 SSSTTRKCQQIIKSGFSIKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLNKANFA 112
Query: 201 FTQIERPTLLIFNYMIRVFSQSEDPGGAICLY-DRLRSWGLNGDNMIFVFVFKACGRAAD 377
F QI +PTLLIFNY+IR SQSE+P AI +Y D + + G+ GDN+ F+++FKAC R D
Sbjct: 113 FIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKD 172
Query: 378 LL 383
+L
Sbjct: 173 VL 174
>ref|XP_004240796.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Solanum lycopersicum]
Length = 597
Score = 91.7 bits (226), Expect = 9e-17
Identities = 49/116 (42%), Positives = 66/116 (56%)
Frame = +3
Query: 36 QKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIE 215
QK P S KELH LIRT K++DP AI KA + F Q E
Sbjct: 15 QKAAPYLNSSNSIASAKELHAHLIRTQKYSDPFAISHVIRLYSLFPTSLHKALVAFNQTE 74
Query: 216 RPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAADLL 383
RPTL I+NYMIR S+S+ P A+ +Y R+R G G+N+ F+F+FKAC + +D++
Sbjct: 75 RPTLPIWNYMIRGLSKSDRPIEALHMYVRMRQQGFPGNNLTFIFIFKACVQLSDIV 130
>gb|EOY23065.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 616
Score = 86.7 bits (213), Expect = 3e-15
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = +3
Query: 6 SYRLVSTTVAQKRNPTARIPISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXR 185
S R + K + P+S + KELH LIRT +H DP +I
Sbjct: 8 SRRFTCFSTPLKPERVTKNPLSINAAKELHAHLIRTQRHEDPFSISPVIRAYSLAPSHLH 67
Query: 186 KAQIVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRL-RSWGLNGDNMIFVFVFKAC 362
KA VF Q + PT+ FN+MIR FSQS P AI +Y+++ G GD M F+FVFKAC
Sbjct: 68 KAHHVFYQTKEPTMFNFNHMIRGFSQSNVPNEAIKMYNQMYYLQGFPGDIMTFIFVFKAC 127
Query: 363 GRAADL 380
R +D+
Sbjct: 128 ARVSDV 133
>ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/104 (39%), Positives = 61/104 (58%)
Frame = +3
Query: 69 SRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIERPTLLIFNYMI 248
S + IKELH +L+R H DP +I KA VF QI+RPTLL++N+MI
Sbjct: 26 SLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMI 85
Query: 249 RVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAADL 380
S+S+ P AI Y+ + G+ G ++ F+F+FK+C R +D+
Sbjct: 86 HGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDV 129
>gb|EPS71383.1| hypothetical protein M569_03376, partial [Genlisea aurea]
Length = 566
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/100 (38%), Positives = 60/100 (60%)
Frame = +3
Query: 81 IKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIERPTLLIFNYMIRVFS 260
++ELHG IRT++H +P A+ KA+ F++IE PTL + N+MIR S
Sbjct: 2 VRELHGHFIRTNRHKNPNAMSQVIESYARSPPSIDKARFAFSEIEAPTLALCNHMIRGLS 61
Query: 261 QSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAADL 380
+S+ P A+ ++D++ GL DN+ +F+ KACGR D+
Sbjct: 62 RSDTPADALHVFDKMCVTGLRIDNITLIFITKACGRVTDV 101
>ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 120 HADPIAIXXXXXXXXXXXXXXRKAQIVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYD 299
H DP +I KA VF QI+RPTLL++N+MI S+S+ P AI Y+
Sbjct: 2 HIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYN 61
Query: 300 RLRSWGLNGDNMIFVFVFKACGRAADL 380
+ G+ G ++ F+F+FK+C R +D+
Sbjct: 62 TMYYKGIQGSHLTFIFLFKSCARVSDV 88
>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 66.2 bits (160), Expect = 4e-09
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Frame = +3
Query: 21 STTVAQKRNPTARI---PISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKA 191
ST Q +NP + + QI ++H +LI T+ +D A A
Sbjct: 4 STPKLQLKNPLLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYA 63
Query: 192 QIVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRA 371
++VF QI +P I N M++ +++S P A+ Y +R GL GDN + FV KACG
Sbjct: 64 ELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAM 123
Query: 372 ADLL 383
LL
Sbjct: 124 CGLL 127
>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product
[Vitis vinifera]
Length = 585
Score = 65.9 bits (159), Expect = 6e-09
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Frame = +3
Query: 21 STTVAQKRNPTARI---PISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKA 191
ST Q +NP + + QI ++H +LI T+ +D A A
Sbjct: 4 STPKLQLKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYA 63
Query: 192 QIVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRA 371
++VF QI +P I N M++ +++S P A+ Y +R GL GDN + FV KACG
Sbjct: 64 ELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAM 123
Query: 372 ADLL 383
LL
Sbjct: 124 CGLL 127
>ref|XP_006588340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 641
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Frame = +3
Query: 72 RDQIKELHG--------RLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIERPTL 227
R++I +H +++ + DP I KA +F QI RPTL
Sbjct: 39 REEISSMHCLLLFSNQLKMVNPNLRTDPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTL 98
Query: 228 LIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGRAADL 380
+N MIR +S S+ P AI +Y+ + GL G+N+ ++F+FKAC R D+
Sbjct: 99 PFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACARVPDV 149
>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein
SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Frame = +3
Query: 66 ISRDQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIERPTLLIFNYM 245
+ + +K+LH L+ + H A+ A VF QIE PT ++N +
Sbjct: 322 VMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTL 381
Query: 246 IRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGR 368
+R +QS+ P AI Y + + G+ DNM F FV KAC +
Sbjct: 382 LRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAK 422
>gb|ESW11890.1| hypothetical protein PHAVU_008G067700g [Phaseolus vulgaris]
Length = 577
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +3
Query: 186 KAQIVFTQIERPTLLIFNYMIRVFSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACG 365
KA +F Q+ RPTL +N MIR +S S+ P AI LY+ + GL GDN+ + F+ KAC
Sbjct: 29 KAHHLFQQVHRPTLPFWNLMIRGWSLSDQPSEAIRLYNLMYYQGLLGDNLTYPFLLKACS 88
Query: 366 RAA 374
R +
Sbjct: 89 RVS 91
>tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 57.8 bits (138), Expect = 1e-06
Identities = 31/98 (31%), Positives = 48/98 (48%)
Frame = +3
Query: 75 DQIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRKAQIVFTQIERPTLLIFNYMIRV 254
+ +K+LH L+ + H A+ A VF QIE PT ++N ++R
Sbjct: 855 EAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRG 914
Query: 255 FSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKACGR 368
+QS+ P AI Y + + G+ DN+ F FV KAC +
Sbjct: 915 LAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAK 952
>emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 78 QIKELHGRLIRTHKHADPIAIXXXXXXXXXXXXXXRK-AQIVFTQIERPTLLIFNYMIRV 254
++K LHG +I T D I + A+ VF QI+RP+L I+N MI+
Sbjct: 20 ELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYIWNSMIKG 79
Query: 255 FSQSEDPGGAICLYDRLRSWGLNGDNMIFVFVFKAC 362
+S SE P A+ +Y +R G D+ F FV KAC
Sbjct: 80 YSISESPDEALTMYREMRQKGYAPDHFTFPFVLKAC 115