BLASTX nr result
ID: Rheum21_contig00038259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038259
(285 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 84 1e-14
emb|CAN71583.1| hypothetical protein VITISV_043292 [Vitis vinifera] 84 2e-14
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 81 1e-13
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 77 2e-12
gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thali... 77 2e-12
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 76 4e-12
emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera] 75 9e-12
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 73 3e-11
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 73 4e-11
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 72 6e-11
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 72 6e-11
gb|ABD96963.1| hypothetical protein [Cleome spinosa] 72 8e-11
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi... 72 8e-11
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao] 71 1e-10
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [... 71 2e-10
gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao] 70 2e-10
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera] 70 2e-10
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 70 2e-10
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 70 3e-10
ref|XP_002307225.1| predicted protein [Populus trichocarpa] 69 5e-10
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
gi|7267743|emb|CAB78169.1| putative retrotransposon
[Arabidopsis thaliana]
Length = 1230
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/89 (44%), Positives = 62/89 (69%)
Frame = -1
Query: 276 SLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDT 97
S+ + L+ LY++K+LP+RI L +L+++KM NLS+ N+D+FLR+ +LE + + D
Sbjct: 96 SMLEALDKLYMSKALPNRIYLKQKLYSYKMQENLSVEGNIDEFLRLIADLENTNVLVSDE 155
Query: 96 HQAVLLLSSLPSQFDTFKDVIQYSSEKLT 10
QA+LLL SLP QFD KD ++Y S + T
Sbjct: 156 DQAILLLMSLPKQFDQLKDTLKYGSGRTT 184
>emb|CAN71583.1| hypothetical protein VITISV_043292 [Vitis vinifera]
Length = 531
Score = 83.6 bits (205), Expect = 2e-14
Identities = 41/91 (45%), Positives = 62/91 (68%)
Frame = -1
Query: 276 SLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDT 97
++WK LE++Y+ KSLP+RI L + F FKM S++E +D+F ++ +LE KI+D
Sbjct: 27 TIWKKLEEIYMLKSLPNRIYLKQKFFGFKMHEKKSIDEIIDEFTKLVVDLESLCVKIEDE 86
Query: 96 HQAVLLLSSLPSQFDTFKDVIQYSSEKLTKE 4
QAVLLL+SLP FD +D ++YS + L+ E
Sbjct: 87 DQAVLLLNSLPKVFDQLRDTLKYSKDSLSLE 117
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/87 (44%), Positives = 60/87 (68%)
Frame = -1
Query: 276 SLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDT 97
++ + L+ LY++K+LP+RI L +L++FKM NLS+ N+D+FL + +LE + + D
Sbjct: 98 AMLEALDRLYMSKALPNRIYLKQKLYSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDE 157
Query: 96 HQAVLLLSSLPSQFDTFKDVIQYSSEK 16
QA+LLL SLP FD KD ++YSS K
Sbjct: 158 DQAILLLMSLPKPFDQLKDTLKYSSGK 184
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/82 (46%), Positives = 58/82 (70%)
Frame = -1
Query: 261 LEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTHQAVL 82
L+ LY++K+LP+RI +L++FKM NLS+ N+D+FL++ +LE + I D QA+L
Sbjct: 103 LDKLYMSKALPNRIYPKQKLYSFKMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAIL 162
Query: 81 LLSSLPSQFDTFKDVIQYSSEK 16
LL++LP FD KD ++YSS K
Sbjct: 163 LLTALPKAFDQLKDTLKYSSGK 184
>gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thaliana]
gi|7267195|emb|CAB77906.1| putative polyprotein
[Arabidopsis thaliana]
Length = 778
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = -1
Query: 252 LYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTHQAVLLLS 73
LY++K+LP++I L +L+ FKM NLS+ N+D+FL + +LE + + D Q +LLL
Sbjct: 75 LYMSKALPNQIYLKQKLYRFKMSENLSMEGNIDEFLHIVADLENLNVLVSDEDQTILLLM 134
Query: 72 SLPSQFDTFKDVIQYSSEK 16
SLP FD KD +QYSS K
Sbjct: 135 SLPKSFDQLKDTLQYSSGK 153
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = -1
Query: 261 LEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTHQAVL 82
L+ LY++K+LP+RI +L++FKM NLS+ N+D+FLR+ +LE + + D QA+L
Sbjct: 103 LDKLYMSKALPNRIYQKQKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAIL 162
Query: 81 LLSSLPSQFDTFKDVIQYSSEKLT 10
LL SLP FD +D ++Y ++T
Sbjct: 163 LLMSLPKPFDQLRDTLKYGLGRVT 186
>emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]
Length = 992
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = -1
Query: 273 LWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTH 94
LW LE LY+TKSL +R+ +L+TFKM +S+ E+LD F ++ +LE D I D
Sbjct: 471 LWLKLESLYMTKSLANRLHKKIKLYTFKMTTGMSIEEHLDHFNKIILDLENIDITILDED 530
Query: 93 QAVLLLSSLPSQFDTFKDVIQYSSEKLT 10
+A+LLL+SL + + K+ I Y + LT
Sbjct: 531 KAILLLTSLDASYTNMKEAIMYGRDSLT 558
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = -1
Query: 273 LWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTH 94
+W LE LY+TKSL +R+ +L+TFKM +S+ +LD F ++ +LE D I D
Sbjct: 84 VWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIEXHLDHFNKIILDLENIDITISDED 143
Query: 93 QAVLLLSSLPSQFDTFKDVIQYSSEKLT 10
+A+LLL+SL + + KD I Y + LT
Sbjct: 144 KAILLLTSLDASYTNMKDAIMYGRDSLT 171
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = -1
Query: 279 KSLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKD 100
K +W LE LY+ SL +R+ L RL+ FKM + S+ +NLD F ++ E+ K+ D
Sbjct: 82 KGVWNKLEQLYMQNSLSNRLYLKERLYGFKMQEDRSIADNLDDFAKIVLEMSNIGIKVDD 141
Query: 99 THQAVLLLSSLPSQFDTFKDVIQYSSEKLTKEK 1
+AVL+L SLP + FK+ ++Y + LT E+
Sbjct: 142 EDKAVLVLKSLPGLYSNFKETMKYGRKTLTLEE 174
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/89 (39%), Positives = 56/89 (62%)
Frame = -1
Query: 267 KGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTHQA 88
K L+ L++ KSLP+RI L RL+ +KM N+++ EN++ F ++ +LE + D QA
Sbjct: 106 KVLDQLFMAKSLPNRIYLKQRLYGYKMSENMTMEENVNDFFKLISDLENVKVVVPDEDQA 165
Query: 87 VLLLSSLPSQFDTFKDVIQYSSEKLTKEK 1
++LL SLP QFD K+ ++Y L E+
Sbjct: 166 IVLLMSLPRQFDQLKETLKYCKTTLHLEE 194
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/84 (36%), Positives = 54/84 (64%)
Frame = -1
Query: 270 WKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTHQ 91
W L+ LYL KSLP+R+ L +++ ++M + +L EN+D+F +M +L ++ D Q
Sbjct: 70 WATLDKLYLVKSLPNRVYLQLKVYNYRMQDSKTLEENVDEFQKMISDLNNLQIQVPDEVQ 129
Query: 90 AVLLLSSLPSQFDTFKDVIQYSSE 19
A+L+LS+LP +D K+ ++Y E
Sbjct: 130 AILILSALPDSYDMLKETLKYGRE 153
>gb|ABD96963.1| hypothetical protein [Cleome spinosa]
Length = 408
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/91 (35%), Positives = 63/91 (69%)
Frame = -1
Query: 273 LWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTH 94
+W+ LE L++ +SLP+R+ L+ R+ F+MD + ++ ENLD F ++ +L + K+++ +
Sbjct: 123 IWRKLERLHIEQSLPNRMYLMQRVSGFRMDSSRTIEENLDIFQKLLSDLHSLNVKVEEEY 182
Query: 93 QAVLLLSSLPSQFDTFKDVIQYSSEKLTKEK 1
QAV LL+SLP ++ ++V++YS ++ E+
Sbjct: 183 QAVYLLNSLPPAYEQLREVLKYSRATISVEE 213
>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 838
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/87 (37%), Positives = 55/87 (63%)
Frame = -1
Query: 261 LEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTHQAVL 82
L+ L++ KSLP+RI L RL+ +KM ++++ EN++ F ++ +LE + D QA++
Sbjct: 100 LDKLFMAKSLPNRIYLKQRLYGYKMSDSMTIEENVNDFFKLISDLENVKVSVPDEDQAIV 159
Query: 81 LLSSLPSQFDTFKDVIQYSSEKLTKEK 1
LL SLP QFD KD ++Y L ++
Sbjct: 160 LLMSLPKQFDQLKDTLKYGKTTLALDE 186
>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/91 (38%), Positives = 57/91 (62%)
Frame = -1
Query: 276 SLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDT 97
++W LE +Y+TKSL +R+ + RL+T KM S+N ++D+F R+ +L+ D KI+D
Sbjct: 85 AMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDE 144
Query: 96 HQAVLLLSSLPSQFDTFKDVIQYSSEKLTKE 4
A++LL LP ++ F D + Y + LT E
Sbjct: 145 DLALILLCYLPPSYENFVDTMLYGRDTLTFE 175
>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1029
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/91 (38%), Positives = 57/91 (62%)
Frame = -1
Query: 276 SLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDT 97
++W LE +Y+TKSL +R+ + RL+T KM S+N ++D+F R+ +L+ D KI+D
Sbjct: 207 AVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDE 266
Query: 96 HQAVLLLSSLPSQFDTFKDVIQYSSEKLTKE 4
A++LL LP ++ F D + Y + LT E
Sbjct: 267 DLALILLCYLPPSYENFVDTMLYGRDTLTFE 297
>gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
Length = 698
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = -1
Query: 276 SLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDT 97
++W L+ +Y+TKSL +R+ + RL+T KM S+N ++D+F R+ +L+ D KI+D
Sbjct: 85 AVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDE 144
Query: 96 HQAVLLLSSLPSQFDTFKDVIQYSSEKLTKE 4
A++LL SLP ++ F D + Y + T E
Sbjct: 145 DLALILLCSLPPSYENFMDTMLYGRDTFTFE 175
>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
Length = 540
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/88 (36%), Positives = 58/88 (65%)
Frame = -1
Query: 273 LWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTH 94
+WK LE LY T++LP+ I L L+ FK++ + +++ LD+F ++ +LE D K++D
Sbjct: 104 VWKKLEGLYRTRALPNHIYLKEHLYGFKIEESKPIDDALDEFNKLVLDLESLDFKVEDED 163
Query: 93 QAVLLLSSLPSQFDTFKDVIQYSSEKLT 10
+A++LL+SLP FK+ ++Y + +T
Sbjct: 164 KAIILLNSLPKSLKHFKETLKYGRDAIT 191
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/91 (36%), Positives = 55/91 (60%)
Frame = -1
Query: 282 TKSLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIK 103
T LW LE LY+TKSL +R+ +L+TFK+ +S+ E+ D F ++ +LE D +
Sbjct: 125 TAELWLKLESLYMTKSLANRLHKKIKLYTFKITPGMSIEEHFDHFNKIILDLENIDITVS 184
Query: 102 DTHQAVLLLSSLPSQFDTFKDVIQYSSEKLT 10
+ +A+LLL+SL + + K+ I Y + +T
Sbjct: 185 NEDKAILLLTSLDASYTNMKEAIMYGRDSMT 215
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/85 (36%), Positives = 54/85 (63%)
Frame = -1
Query: 270 WKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKDTHQ 91
W+ L+ L++ +SLP R+ +TFKM N ++EN+D FL++ +L + D Q
Sbjct: 75 WETLDRLFMIRSLPHRVYTQLSFYTFKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQ 134
Query: 90 AVLLLSSLPSQFDTFKDVIQYSSEK 16
A+LLLSSLP+++D + ++YS+ +
Sbjct: 135 AILLLSSLPARYDGLVETMKYSNSR 159
>ref|XP_002307225.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = -1
Query: 279 KSLWKGLEDLYLTKSLPSRISLLCRLFTFKMDINLSLNENLDKFLRMTQELERCDDKIKD 100
K LW+ LED ++ KS+ +R+ L R+F F+ S+NE+L+ F +MT +L+ D +I D
Sbjct: 100 KKLWQALEDKFMKKSIENRLYLKKRIFRFQHKKGTSMNEHLNDFNKMTADLKNLDVEIDD 159
Query: 99 THQAVLLLSSLPSQFDTFKDVIQYSSEKL 13
+A+LLL+SLP ++ + Y EK+
Sbjct: 160 EDKALLLLNSLPDIYEHLVTTLLYGKEKI 188