BLASTX nr result
ID: Rheum21_contig00038221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038221
(319 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006279704.1| hypothetical protein CARUB_v10027233mg [Caps... 91 2e-16
ref|XP_006398150.1| hypothetical protein EUTSA_v10001050mg [Eutr... 90 3e-16
ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana] gi|2780545... 90 3e-16
ref|XP_006374698.1| hypothetical protein POPTR_0015s15410g [Popu... 90 3e-16
dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana] 90 3e-16
ref|XP_002321813.1| predicted protein [Populus trichocarpa] 90 3e-16
ref|XP_002333234.1| predicted protein [Populus trichocarpa] 90 3e-16
pdb|2V07|A Chain A, Structure Of The Arabidopsis Thaliana Cytoch... 90 3e-16
pdb|2CE0|A Chain A, Structure Of Oxidized Arabidopsis Thaliana C... 90 3e-16
pdb|2DGE|A Chain A, Crystal Structure Of Oxidized Cytochrome C6a... 90 3e-16
ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like... 89 5e-16
ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like... 89 5e-16
ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like... 89 5e-16
ref|XP_006448718.1| hypothetical protein CICLE_v10017084mg [Citr... 89 5e-16
ref|XP_002865286.1| electron transporter protein [Arabidopsis ly... 89 8e-16
ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyr... 89 8e-16
ref|NP_001060021.1| Os07g0567400 [Oryza sativa Japonica Group] g... 88 1e-15
gb|EAZ04378.1| hypothetical protein OsI_26520 [Oryza sativa Indi... 88 1e-15
gb|ABK56012.1| electron transporter protein [Brassica rapa] 88 1e-15
ref|XP_006658708.1| PREDICTED: cytochrome c6, chloroplastic-like... 87 2e-15
>ref|XP_006279704.1| hypothetical protein CARUB_v10027233mg [Capsella rubella]
gi|482548408|gb|EOA12602.1| hypothetical protein
CARUB_v10027233mg [Capsella rubella]
Length = 175
Score = 90.9 bits (224), Expect = 2e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA+QGWP +
Sbjct: 128 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQAEQGWPNV 172
>ref|XP_006398150.1| hypothetical protein EUTSA_v10001050mg [Eutrema salsugineum]
gi|557099239|gb|ESQ39603.1| hypothetical protein
EUTSA_v10001050mg [Eutrema salsugineum]
Length = 174
Score = 90.1 bits (222), Expect = 3e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA QGWP +
Sbjct: 127 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPNV 171
>ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana]
gi|27805454|sp|Q93VA3.1|CYC6_ARATH RecName:
Full=Cytochrome c6, chloroplastic; AltName:
Full=Cytochrome c-552; Short=Atc6; AltName:
Full=Cytochrome c-553; AltName: Full=Cytochrome c553;
AltName: Full=Soluble cytochrome f; Flags: Precursor
gi|13926305|gb|AAK49619.1|AF372903_1 AT5g45040/K21C13_23
[Arabidopsis thaliana] gi|16323250|gb|AAL15359.1|
AT5g45040/K21C13_23 [Arabidopsis thaliana]
gi|19571824|emb|CAD27418.1| c6 type cytochrome
[Arabidopsis thaliana] gi|332007810|gb|AED95193.1|
cytochrome c6 [Arabidopsis thaliana]
Length = 175
Score = 89.7 bits (221), Expect = 3e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA QGWP +
Sbjct: 128 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTV 172
>ref|XP_006374698.1| hypothetical protein POPTR_0015s15410g [Populus trichocarpa]
gi|550322790|gb|ERP52495.1| hypothetical protein
POPTR_0015s15410g [Populus trichocarpa]
Length = 209
Score = 89.7 bits (221), Expect = 3e-16
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGE CTPRGQCTFGPRL DEEI+LLAQFVK QA QGWP I+
Sbjct: 160 GRMPGFGESCTPRGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIE 205
>dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana]
Length = 151
Score = 89.7 bits (221), Expect = 3e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA QGWP +
Sbjct: 104 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTV 148
>ref|XP_002321813.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 89.7 bits (221), Expect = 3e-16
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGE CTPRGQCTFGPRL DEEI+LLAQFVK QA QGWP I+
Sbjct: 61 GRMPGFGESCTPRGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIE 106
>ref|XP_002333234.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 89.7 bits (221), Expect = 3e-16
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGE CTPRGQCTFGPRL DEEI+LLAQFVK QA QGWP I+
Sbjct: 110 GRMPGFGESCTPRGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIE 155
>pdb|2V07|A Chain A, Structure Of The Arabidopsis Thaliana Cytochrome C6a V52q
Variant
Length = 105
Score = 89.7 bits (221), Expect = 3e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA QGWP +
Sbjct: 58 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTV 102
>pdb|2CE0|A Chain A, Structure Of Oxidized Arabidopsis Thaliana Cytochrome 6a
gi|112490147|pdb|2CE1|A Chain A, Structure Of Reduced
Arabidopsis Thaliana Cytochrome 6a
Length = 105
Score = 89.7 bits (221), Expect = 3e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA QGWP +
Sbjct: 58 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTV 102
>pdb|2DGE|A Chain A, Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana gi|110591228|pdb|2DGE|B Chain B,
Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana gi|110591229|pdb|2DGE|C Chain C,
Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana gi|110591230|pdb|2DGE|D Chain D,
Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana
Length = 105
Score = 89.7 bits (221), Expect = 3e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA QGWP +
Sbjct: 58 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTV 102
>ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like [Citrus sinensis]
gi|568868385|ref|XP_006487480.1| PREDICTED: cytochrome
c6, chloroplastic-like [Citrus sinensis]
Length = 172
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGEKCTPRGQCTFG RL DE+I+LLAQFVK QA QGWPKI+
Sbjct: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
>ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X2 [Citrus
sinensis]
Length = 147
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGEKCTPRGQCTFG RL DE+I+LLAQFVK QA QGWPKI+
Sbjct: 98 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 143
>ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X1 [Citrus
sinensis]
Length = 174
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGEKCTPRGQCTFG RL DE+I+LLAQFVK QA QGWPKI+
Sbjct: 125 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 170
>ref|XP_006448718.1| hypothetical protein CICLE_v10017084mg [Citrus clementina]
gi|557551329|gb|ESR61958.1| hypothetical protein
CICLE_v10017084mg [Citrus clementina]
Length = 147
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGEKCTPRGQCTFG RL DE+I+LLAQFVK QA QGWPKI+
Sbjct: 98 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 143
>ref|XP_002865286.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata]
gi|297311121|gb|EFH41545.1| electron transporter protein
[Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA +GWP +
Sbjct: 129 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADKGWPNV 173
>ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyrata]
gi|297309370|gb|EFH39794.1| cytochrome c6 [Arabidopsis
lyrata subsp. lyrata]
Length = 176
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LLA+FVK QA +GWP +
Sbjct: 129 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADKGWPNV 173
>ref|NP_001060021.1| Os07g0567400 [Oryza sativa Japonica Group]
gi|34393286|dbj|BAC83200.1| cytochrome C6, chloroplast
precursor-like protein [Oryza sativa Japonica Group]
gi|113611557|dbj|BAF21935.1| Os07g0567400 [Oryza sativa
Japonica Group]
Length = 73
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGEKCTPRGQCTFGPRL++++I+LLA FVK QA+ GWPKID
Sbjct: 24 GRMPGFGEKCTPRGQCTFGPRLVEDDIKLLAAFVKSQAENGWPKID 69
>gb|EAZ04378.1| hypothetical protein OsI_26520 [Oryza sativa Indica Group]
gi|125600761|gb|EAZ40337.1| hypothetical protein
OsJ_24784 [Oryza sativa Japonica Group]
Length = 188
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGEKCTPRGQCTFGPRL++++I+LLA FVK QA+ GWPKID
Sbjct: 139 GRMPGFGEKCTPRGQCTFGPRLVEDDIKLLAAFVKSQAENGWPKID 184
>gb|ABK56012.1| electron transporter protein [Brassica rapa]
Length = 174
Score = 87.8 bits (216), Expect = 1e-15
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKI 135
GRMPGFGEKCTPRGQCTFGPRL DEEI+LL++FVKLQA GWP +
Sbjct: 127 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLSEFVKLQADLGWPNV 171
>ref|XP_006658708.1| PREDICTED: cytochrome c6, chloroplastic-like [Oryza brachyantha]
Length = 138
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +1
Query: 1 GRMPGFGEKCTPRGQCTFGPRLMDEEIRLLAQFVKLQAQQGWPKID 138
GRMPGFGEKCTPRGQCTFGPRL +++I+LLA FVK QA+ GWPKID
Sbjct: 89 GRMPGFGEKCTPRGQCTFGPRLAEDDIKLLAAFVKSQAENGWPKID 134