BLASTX nr result
ID: Rheum21_contig00038160
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00038160 (301 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume... 172 3e-41 gb|AFU96543.1| Ycf3, partial (chloroplast) [Phyllanthus urinaria] 172 3e-41 gb|ADD30875.1| putative RF3 protein [Plumbago auriculata] 172 3e-41 ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyr... 172 3e-41 ref|NP_051060.2| photosystem I assembly protein Ycf3 [Arabidopsi... 171 9e-41 ref|NP_054934.1| photosystem I assembly protein Ycf3 [Spinacia o... 171 9e-41 ref|YP_009002259.1| photosystem I assembly protein Ycf3 (chlorop... 171 9e-41 emb|CCQ71621.1| photosystem I assembly protein Ycf3 (chloroplast... 171 9e-41 ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) ... 171 9e-41 ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) ... 171 9e-41 ref|YP_008994291.1| hypothetical chloroplast RF34 [Melianthus vi... 171 9e-41 ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ... 171 9e-41 ref|YP_008963396.1| hypothetical chloroplast RF34 (chloroplast) ... 171 9e-41 ref|YP_008963606.1| photosystem I assembly protein Ycf3 (chlorop... 171 9e-41 ref|YP_008964035.1| photosystem I assembly protein Ycf3 [Ajuga r... 171 9e-41 ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) ... 171 9e-41 gb|AGW04899.1| photosystem I assembly protein [Telosma cordata] 171 9e-41 gb|AGW04822.1| photosystem I assembly protein [Sisyranthus trich... 171 9e-41 gb|AGW04668.1| photosystem I assembly protein [Matelea biflora] 171 9e-41 gb|AGW04519.1| photosystem I assembly protein [Eustegia minuta] 171 9e-41 >gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa] Length = 169 Score = 172 bits (437), Expect = 3e-41 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN Sbjct: 44 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 103 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 104 PFLPQAFNNMAVICHYRGEQAI 125 >gb|AFU96543.1| Ycf3, partial (chloroplast) [Phyllanthus urinaria] Length = 169 Score = 172 bits (437), Expect = 3e-41 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN Sbjct: 44 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 103 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 104 PFLPQAFNNMAVICHYRGEQAI 125 >gb|ADD30875.1| putative RF3 protein [Plumbago auriculata] Length = 171 Score = 172 bits (437), Expect = 3e-41 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyrum esculentum subsp. ancestrale] Length = 168 Score = 172 bits (437), Expect = 3e-41 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|NP_051060.2| photosystem I assembly protein Ycf3 [Arabidopsis thaliana] gi|157011961|ref|YP_001123287.2| hypothetical protein BaveCp022 [Barbarea verna] gi|157011963|ref|YP_001123638.2| photosystem I assembly protein Ycf3 [Lepidium virginicum] gi|157011964|ref|YP_001123815.2| photosystem I assembly protein Ycf3 [Nasturtium officinale] gi|157011966|ref|YP_001123200.2| hypothetical protein ArhiCp021 [Arabis hirsuta] gi|157011967|ref|YP_001123463.2| photosystem I assembly protein Ycf3 [Crucihimalaya wallichii] gi|157011970|ref|YP_001123551.2| hypothetical protein DrneCp021 [Draba nemorosa] gi|157011971|ref|YP_001123726.2| photosystem I assembly protein Ycf3 [Lobularia maritima] gi|383930513|ref|YP_005089953.1| ycf3 gene product (chloroplast) [Brassica napus] gi|484759646|ref|YP_007889943.1| photosystem I assembly protein Ycf3 (chloroplast) [Pachycladon cheesemanii] gi|575771007|ref|YP_009000333.1| hypothetical protein BN845_0330 (chloroplast) [Arabis alpina] gi|297837953|ref|XP_002886858.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|48429178|sp|P61843.1|YCF3_ARATH RecName: Full=Photosystem I assembly protein Ycf3 gi|48429179|sp|P61844.1|YCF3_SINAL RecName: Full=Photosystem I assembly protein Ycf3 gi|68053007|sp|Q53CF3.1|YCF3_BRAJU RecName: Full=Photosystem I assembly protein Ycf3 gi|4995840|emb|CAB44315.1| YCF3 protein [Sinapis alba] gi|50726919|gb|AAT81155.1| YCF3 [Brassica juncea] gi|262400810|gb|ACY66299.1| photosystem I assembly protein Ycf3 [Brassica napus] gi|297332699|gb|EFH63117.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|392934154|gb|AFM92280.1| photosystem I assembly protein Ycf3 (chloroplast) [Pachycladon cheesemanii] gi|571025805|emb|CCW28180.1| hypothetical protein BN845_0330 (chloroplast) [Arabis alpina] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|NP_054934.1| photosystem I assembly protein Ycf3 [Spinacia oleracea] gi|18203267|sp|Q9M3M5.1|YCF3_SPIOL RecName: Full=Photosystem I assembly protein Ycf3 gi|7636107|emb|CAB88727.1| ycf3 protein [Spinacia oleracea] Length = 165 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 40 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 99 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 100 PFLPQAFNNMAVICHYRGEQAI 121 >ref|YP_009002259.1| photosystem I assembly protein Ycf3 (chloroplast) [Pinguicula ehlersiae] gi|575882141|emb|CDL78815.1| photosystem I assembly protein Ycf3 (chloroplast) [Pinguicula ehlersiae] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >emb|CCQ71621.1| photosystem I assembly protein Ycf3 (chloroplast) [Salvia miltiorrhiza] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) [Agrostemma githago] gi|576312302|ref|YP_009000186.1| hypothetical chloroplast RF34 (chloroplast) [Silene paradoxa] gi|555944022|gb|AGZ17926.1| hypothetical chloroplast RF34 (chloroplast) [Agrostemma githago] gi|555944275|gb|AGZ18176.1| hypothetical chloroplast RF34 (chloroplast) [Silene paradoxa] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) [Hypseocharis bilobata] gi|540067559|gb|AGV02910.1| hypothetical chloroplast RF34 (chloroplast) [Hypseocharis bilobata] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|YP_008994291.1| hypothetical chloroplast RF34 [Melianthus villosus] gi|527355141|gb|AGS13010.1| hypothetical chloroplast RF34 [Melianthus villosus] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense] gi|403226782|gb|AFR25661.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense] Length = 169 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 44 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 103 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 104 PFLPQAFNNMAVICHYRGEQAI 125 >ref|YP_008963396.1| hypothetical chloroplast RF34 (chloroplast) [Sedum sarmentosum] gi|402797531|gb|AFQ99063.1| hypothetical chloroplast RF34 (chloroplast) [Sedum sarmentosum] Length = 169 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 44 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 103 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 104 PFLPQAFNNMAVICHYRGEQAI 125 >ref|YP_008963606.1| photosystem I assembly protein Ycf3 (chloroplast) [Lupinus luteus] gi|485474317|gb|AGK82919.1| photosystem I assembly protein Ycf3 (chloroplast) [Lupinus luteus] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|YP_008964035.1| photosystem I assembly protein Ycf3 [Ajuga reptans] gi|558697200|gb|AHA84955.1| photosystem I assembly protein Ycf3 [Ajuga reptans] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata] gi|458599091|gb|AGG38957.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >gb|AGW04899.1| photosystem I assembly protein [Telosma cordata] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >gb|AGW04822.1| photosystem I assembly protein [Sisyranthus trichostomus] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >gb|AGW04668.1| photosystem I assembly protein [Matelea biflora] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124 >gb|AGW04519.1| photosystem I assembly protein [Eustegia minuta] Length = 168 Score = 171 bits (433), Expect = 9e-41 Identities = 81/82 (98%), Positives = 82/82 (100%) Frame = +3 Query: 54 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 233 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNG+HTKALEYYFRALERN Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102 Query: 234 PFLPQAFNNMAVICHYRGEQAI 299 PFLPQAFNNMAVICHYRGEQAI Sbjct: 103 PFLPQAFNNMAVICHYRGEQAI 124