BLASTX nr result
ID: Rheum21_contig00038130
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00038130
(322 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 65 1e-08
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 65 1e-08
gb|ABF99760.1| hypothetical protein LOC_Os03g62000 [Oryza sativa... 65 1e-08
gb|ABA99231.1| hypothetical protein LOC_Os12g34030 [Oryza sativa... 59 7e-07
dbj|BAI67988.1| hypothetical protein [Oryza sativa Indica Group]... 59 7e-07
ref|YP_002000555.1| orf258 [Oryza sativa Japonica Group] gi|2349... 59 7e-07
gb|EMS67607.1| Putative disease resistance protein RGA3 [Triticu... 59 9e-07
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 59 9e-07
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 59 9e-07
gb|ABN07997.1| contains similarity to reverse trancriptase , rel... 59 9e-07
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ... 58 1e-06
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo... 58 1e-06
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi... 58 1e-06
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 58 2e-06
ref|NP_001175214.1| Os07g0501200 [Oryza sativa Japonica Group] g... 58 2e-06
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu... 57 3e-06
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo... 57 3e-06
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 57 3e-06
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 57 3e-06
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 57 3e-06
>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W N++ LP+D+EI+ L+ D+ W G F+ + A R+ N W E+
Sbjct: 1339 WDANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAEN-WAKEEA 1397
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
S++ S +I K W+ +W NV KVK FTWRA +P + K R
Sbjct: 1398 SSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKR 1443
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W N++ LP+D+EI+ L+ D+ W G F+ + A R+ N W E+
Sbjct: 1367 WDANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAEN-WAKEEA 1425
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
S++ S +I K W+ +W NV KVK FTWRA +P + K R
Sbjct: 1426 SSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKR 1471
>gb|ABF99760.1| hypothetical protein LOC_Os03g62000 [Oryza sativa Japonica Group]
Length = 322
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/107 (32%), Positives = 59/107 (55%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W +++ LPID+E + ++++ Q ND+ W GIF+ + A + L+ + E
Sbjct: 25 WDVDKISRLFLPIDVETICSIRISSRQENDFIAWHPDKHGIFSVRSAYSLALD-FSRTEV 83
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHRK 321
S++ S ++ K+WK VW +V KVK F WRA +P LE K ++
Sbjct: 84 SSSSSSIAMSKVWKLVWKCDVPQKVKIFVWRAGSNCLPTLENKKKKE 130
>gb|ABA99231.1| hypothetical protein LOC_Os12g34030 [Oryza sativa Japonica Group]
Length = 346
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/104 (27%), Positives = 51/104 (49%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W ++Q P+D + + + +D+ W + TGIFT + A R ++ +E
Sbjct: 55 WDVEKVQRIFFPLDAAAILNMPRPRTEQDDFWAWAWDRTGIFTVRSAYRELIQRCGLSEP 114
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLK 312
+ T S WK +W L ++PK++ F WR +K +PC L+
Sbjct: 115 A-TGSSTGDEATWKALWRLRIMPKIRVFWWRVVKNLLPCAAELR 157
>dbj|BAI67988.1| hypothetical protein [Oryza sativa Indica Group]
gi|374277648|gb|AEZ03754.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277660|gb|AEZ03765.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
Length = 317
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/104 (27%), Positives = 51/104 (49%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W ++Q P+D + + + +D+ W + TGIFT + A R ++ +E
Sbjct: 26 WDVEKVQRIFFPLDAAAILNMPRPRTEQDDFWAWAWDRTGIFTVRSAYRELIQRCGLSEP 85
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLK 312
+ T S WK +W L ++PK++ F WR +K +PC L+
Sbjct: 86 A-TGSSTGDEATWKALWRLRIMPKIRVFWWRVVKNLLPCAAELR 128
>ref|YP_002000555.1| orf258 [Oryza sativa Japonica Group] gi|23495378|dbj|BAC19859.1|
orf258 [Oryza sativa Japonica Group]
Length = 258
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/104 (27%), Positives = 51/104 (49%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W ++Q P+D + + + +D+ W + TGIFT + A R ++ +E
Sbjct: 26 WDVEKVQRIFFPLDAAAILNMPRPRTEQDDFWAWAWDRTGIFTVRSAYRELIQRCGLSEP 85
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLK 312
+ T S WK +W L ++PK++ F WR +K +PC L+
Sbjct: 86 A-TGSSTGDEATWKALWRLRIMPKIRVFWWRVVKNLLPCAAELR 128
>gb|EMS67607.1| Putative disease resistance protein RGA3 [Triticum urartu]
Length = 1426
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Frame = +1
Query: 7 WNELQPRLLPIDLEILPALQMILPQSN--DYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
WNE I ++L L M P+ D+ W + +GIFT + A +++ +N +
Sbjct: 99 WNEEVIERNFIAPDVLDILNMPRPRVAIPDFWAWGHERSGIFTVRLAYMMLMEDREN--N 156
Query: 181 SNTVSRQSIGK-IWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
N V + G+ +WK +W L V PK++ F WR LKGF+P E L R
Sbjct: 157 FNQVGSSTQGEEVWKSLWRLKVRPKLRIFWWRVLKGFLPAKEELCRR 203
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W +L LP+D+ + + + + D W Y G+FT K A RV L E
Sbjct: 911 WDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVALRVTSGDED 970
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIP 294
++ S G +W+ +WN V K+K F WR +P
Sbjct: 971 ESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILP 1008
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W +L LP+D+ + + + + D W Y G+FT K A RV L E
Sbjct: 1391 WDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVALRVTSGDED 1450
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIP 294
++ S G +W+ +WN V K+K F WR +P
Sbjct: 1451 ESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILP 1488
>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
truncatula]
Length = 407
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +1
Query: 7 WNE--LQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
WN+ L+ + + I+++ + + ++ + D W+++ TGI++ K L +W +
Sbjct: 252 WNKVILEDQFISINIDQISHIPLVNTTNPDSLMWMHNPTGIYSVKSGYNT-LRTWQTQQI 310
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
+NT + IWK++W+L+ IP+ K WR L +P +L+ R
Sbjct: 311 NNTSTSSDETLIWKKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKR 356
>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1378
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W + L+ PID+ + + I +D W Y+ +G F+ K A WD
Sbjct: 435 WGGDLLKTIFWPIDVCRIMQIP-IRAGRDDLVAWQYNRSGTFSVKSAYHC---QWDYKFG 490
Query: 181 SNTVSRQ----SIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
+ Q S ++WKR+WNL V K+K F WRALKG +PC L +R
Sbjct: 491 ERSAQMQASTASRSRLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANR 540
>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
Length = 1395
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W + L+ PID+ + + I +D W Y+ +G F+ K A WD
Sbjct: 465 WGGDLLKTIFWPIDVCRIMQIP-IRAGRDDLVAWQYNRSGTFSVKSAYHC---QWDYKFG 520
Query: 181 SNTVSRQ----SIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
+ Q S ++WKR+WNL V K+K F WRALKG +PC L +R
Sbjct: 521 ERSAQMQASTASRSRLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANR 570
>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
Length = 1546
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W + L+ PID+ + + I +D W Y+ +G F+ K A WD
Sbjct: 616 WGGDLLKTIFWPIDVCRIMQIP-IRAGRDDLVAWQYNRSGTFSVKSAYHC---QWDYKFG 671
Query: 181 SNTVSRQ----SIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
+ Q S ++WKR+WNL V K+K F WRALKG +PC L +R
Sbjct: 672 ERSAQMQASTASRSRLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANR 721
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 57.8 bits (138), Expect = 2e-06
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDK--YA*RVILNSWDNA 174
W N ++ LP+D+E + A+ + D W +S G F+ K Y + + +
Sbjct: 566 WDMNFIKQHFLPVDVEKILAVPLCDGNGGDVAVWHFSDDGRFSVKSGYWFGMEMKRLEKG 625
Query: 175 ESSNT--VSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHR 318
SS + V+ SI IW +W+L V KVK F WRA F+PC+E L R
Sbjct: 626 SSSGSGHVNSNSIN-IWSLIWDLLVPNKVKLFLWRACHAFLPCVERLFKR 674
>ref|NP_001175214.1| Os07g0501200 [Oryza sativa Japonica Group]
gi|255677791|dbj|BAH93942.1| Os07g0501200 [Oryza sativa
Japonica Group]
Length = 620
Score = 57.8 bits (138), Expect = 2e-06
Identities = 33/107 (30%), Positives = 51/107 (47%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W +Q ID +I+ ++ Q D+ W GIF+ + A + + S N S
Sbjct: 211 WDLERIQQHFNQIDTDIILKIRPSRSQEADFVAWHPDKHGIFSVRSAYHLAV-SLANVNS 269
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHRK 321
S++ S + K WK VWN N+ KVK F W+A + L+ K R+
Sbjct: 270 SSSSSGHDLSKAWKLVWNCNIPQKVKIFAWKAATNSLATLQNKKTRR 316
>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
gi|223537282|gb|EEF38913.1| RNA binding protein,
putative [Ricinus communis]
Length = 446
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/107 (28%), Positives = 53/107 (49%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDKYA*RVILNSWDNAES 180
W N ++ D E + ++ +S D R W++S++GIF+ + + NS N
Sbjct: 57 WNCNLVRACFSQQDAEAILQIKPSHRKSPDVRYWVHSNSGIFSSRSTYYIAWNSLLNFTP 116
Query: 181 SNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHRK 321
+T + + W LN++ VK+F WR +PC+E LK+RK
Sbjct: 117 PST--SHGTAPVVNKCWRLNILHGVKHFMWRLNHNLLPCIENLKNRK 161
>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
Length = 1076
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +1
Query: 7 WNELQPRLLPIDLEILPALQMILP--QSNDYRRWLYSSTGIFTDKYA*RVILNSWDNA-- 174
WNE R + + + L++ LP Q +D+ W + +G+FT K A ++ N
Sbjct: 664 WNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTVKSAYKLAWNLSGKGVV 723
Query: 175 ESSNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHRK 321
+SS++ + KIW RVWN V KVK F W+ + +P E + RK
Sbjct: 724 QSSSSTATSGERKIWSRVWNAKVQAKVKIFIWKLAQDKLPTWENKRRRK 772
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +1
Query: 7 WNELQPRLLPIDLEILPALQMILP--QSNDYRRWLYSSTGIFTDKYA*RVILNSWDNA-- 174
WNE R + + + L++ LP Q +D+ W + +G+FT K A ++ N
Sbjct: 858 WNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTVKSAYKLAWNLSGKGVV 917
Query: 175 ESSNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHRK 321
+SS++ + KIW RVWN V KVK F W+ + +P E + RK
Sbjct: 918 QSSSSTATSGERKIWSRVWNAKVQAKVKIFIWKLAQDKLPTWENKRRRK 966
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +1
Query: 7 WNELQPRLLPIDLEILPALQMILP--QSNDYRRWLYSSTGIFTDKYA*RVILNSWDNA-- 174
WNE R + + + L++ LP Q +D+ W + +G+FT K A ++ N
Sbjct: 883 WNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTVKSAYKLAWNLSGKGVV 942
Query: 175 ESSNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHRK 321
+SS++ + KIW RVWN V KVK F W+ + +P E + RK
Sbjct: 943 QSSSSTATSGERKIWSRVWNAKVQAKVKIFIWKLAQDKLPTWENKRRRK 991
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +1
Query: 1 WKWNELQPRLLPIDLEILPALQMILPQSNDYRRWLYSSTGIFTDK---YA*RVILNSWDN 171
W +Q LP+D + + ++ + +D W Y++ G +T K + + +
Sbjct: 974 WDVIFIQTHFLPVDADKILSIPVCERSGSDVAIWHYTNDGYYTVKSGYWLAMELKQVGKS 1033
Query: 172 AESSNTVSRQSIGKIWKRVWNLNVIPKVKNFTWRALKGFIPCLETLKHRK 321
SS + +W +W L+V KVK F WRA F+PC+E L RK
Sbjct: 1034 TSSSGEKGETNSNSVWSIIWGLSVPNKVKLFLWRACHAFLPCVERLFKRK 1083