BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00038112
         (458 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus nota...    99   4e-19
emb|CBI17834.3| unnamed protein product [Vitis vinifera]               98   1e-18
ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ...    98   1e-18
gb|EOY31825.1| X-ray repair cross complementing 3 (XRCC3) isofor...    97   3e-18
ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog ...    95   8e-18
ref|XP_002531657.1| X-ray repair cross complementing protein 3, ...    95   8e-18
emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]    95   8e-18
ref|XP_006845632.1| hypothetical protein AMTR_s00019p00219950 [A...    91   2e-16
ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Popu...    90   4e-16
gb|AFW71835.1| hypothetical protein ZEAMMB73_748424 [Zea mays]         86   4e-15
ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog ...    86   7e-15
ref|XP_006474178.1| PREDICTED: DNA repair protein XRCC3 homolog ...    84   1e-14
ref|XP_006453378.1| hypothetical protein CICLE_v10008928mg [Citr...    84   1e-14
ref|XP_003572626.1| PREDICTED: DNA repair protein XRCC3 homolog ...    82   7e-14
ref|XP_004243278.1| PREDICTED: DNA repair protein XRCC3 homolog ...    81   1e-13
ref|XP_006279666.1| hypothetical protein CARUB_v10026831mg, part...    80   3e-13
gb|EMT33552.1| DNA repair XRCC3-like protein [Aegilops tauschii]       80   3e-13
gb|EMS60012.1| DNA repair protein XRCC3-like protein [Triticum u...    80   3e-13
ref|XP_002454016.1| hypothetical protein SORBIDRAFT_04g023090 [S...    79   5e-13
ref|XP_006348882.1| PREDICTED: DNA repair protein XRCC3 homolog ...    79   8e-13

>gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus notabilis]
          Length = 299

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 50/78 (64%), Positives = 59/78 (75%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVCPALGL+WANCVN+RLFLSR  E + EE G    A+  +G+    + RR IHV+FAPH
Sbjct: 223 RVCPALGLAWANCVNSRLFLSRNEEVIREENG---SANAGNGDTLRRQTRRRIHVLFAPH 279

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP SS EFVIR+EGVFGV
Sbjct: 280 LPESSTEFVIRREGVFGV 297


>emb|CBI17834.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 56/78 (71%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVC ALGLSWANCVN+RLFLSR  E +GE  G   V     G+  +   RR++HVIFAPH
Sbjct: 184 RVCAALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVG---AGDTVSRLTRRHLHVIFAPH 240

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP SSCEFVI +EGV GV
Sbjct: 241 LPESSCEFVISREGVLGV 258


>ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
          Length = 300

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 56/78 (71%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVC ALGLSWANCVN+RLFLSR  E +GE  G   V     G+  +   RR++HVIFAPH
Sbjct: 224 RVCAALGLSWANCVNSRLFLSRNEEIVGEVTGLGGVG---AGDTVSRLTRRHLHVIFAPH 280

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP SSCEFVI +EGV GV
Sbjct: 281 LPESSCEFVISREGVLGV 298


>gb|EOY31825.1| X-ray repair cross complementing 3 (XRCC3) isoform 1 [Theobroma
           cacao] gi|508784570|gb|EOY31826.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784571|gb|EOY31827.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784572|gb|EOY31828.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
           gi|508784573|gb|EOY31829.1| X-ray repair cross
           complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
          Length = 299

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/78 (61%), Positives = 56/78 (71%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVCPALGL+WANCVN+RLFLSR  E   EE G       E G F   + RR ++V+FAPH
Sbjct: 220 RVCPALGLAWANCVNSRLFLSRHEEVNREENGKLI---GESGGFVCKQTRRKLYVVFAPH 276

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP SSCEFVI +EG+FGV
Sbjct: 277 LPESSCEFVITREGLFGV 294


>ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
           gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair
           protein XRCC3 homolog [Cucumis sativus]
          Length = 294

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 46/78 (58%), Positives = 56/78 (71%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVCPALGL+WANCVN+RLFLSR  E +GE  G    ++         R RR++HV+FAPH
Sbjct: 218 RVCPALGLAWANCVNSRLFLSRNEEVVGEGEGMMNGSELVQRR----RTRRWLHVVFAPH 273

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP SSCE+VI +EGV GV
Sbjct: 274 LPKSSCEYVINREGVVGV 291


>ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray
           repair cross complementing protein 3, xrcc3, putative
           [Ricinus communis]
          Length = 301

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 49/78 (62%), Positives = 59/78 (75%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVCPALGL+WANCVN+RLFLSR      +E G   V   E G+F + + RR +HV+FAPH
Sbjct: 231 RVCPALGLAWANCVNSRLFLSR------DENGM--VDGAESGSFCS-QTRRRLHVVFAPH 281

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP SSCEFVIR+EGVFG+
Sbjct: 282 LPYSSCEFVIRREGVFGI 299


>emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
          Length = 2077

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 48/78 (61%), Positives = 55/78 (70%)
 Frame = -3

Query: 456  RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
            RVC ALGLSWANCVN+RLFLSR  E + E  G   V     G+  +   RR++HVIFAPH
Sbjct: 2001 RVCAALGLSWANCVNSRLFLSRNEEIVXEVTGLGGVGA---GDTVSRLTRRHLHVIFAPH 2057

Query: 276  LPSSSCEFVIRKEGVFGV 223
            LP SSCEFVI +EGV GV
Sbjct: 2058 LPESSCEFVISREGVLGV 2075


>ref|XP_006845632.1| hypothetical protein AMTR_s00019p00219950 [Amborella trichopoda]
           gi|548848204|gb|ERN07307.1| hypothetical protein
           AMTR_s00019p00219950 [Amborella trichopoda]
          Length = 315

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 8/86 (9%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEER--GFAAVADEEDGNFAAG------RIRRY 301
           +VCPALGLSWANCVN+R+FLSR  E + + +  G  + A  E+G F  G      R RR 
Sbjct: 228 KVCPALGLSWANCVNSRVFLSRDEEKVADNKMWGSNSQALSENGGFEDGYGDFRTRTRRK 287

Query: 300 IHVIFAPHLPSSSCEFVIRKEGVFGV 223
           + V+FAPHLP  SCEF IR++GVFGV
Sbjct: 288 MQVVFAPHLPKFSCEFEIRRDGVFGV 313


>ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Populus trichocarpa]
           gi|222865909|gb|EEF03040.1| hypothetical protein
           POPTR_0018s10090g [Populus trichocarpa]
          Length = 290

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/78 (60%), Positives = 54/78 (69%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVCPALGLSWANCVN+RLFLS+      +E     V   E G F +   RR +HV+FAPH
Sbjct: 218 RVCPALGLSWANCVNSRLFLSK------DEYESGLVGGGESG-FLSRETRRRLHVVFAPH 270

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP  SCEFVIR+EGV GV
Sbjct: 271 LPDLSCEFVIRREGVVGV 288


>gb|AFW71835.1| hypothetical protein ZEAMMB73_748424 [Zea mays]
          Length = 291

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/78 (55%), Positives = 52/78 (66%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           R+ PALG++WANCVNTRLFL+R VE                GN  +G  RR++ V FAPH
Sbjct: 226 RLSPALGIAWANCVNTRLFLTREVE----------------GNGTSGSARRWMKVAFAPH 269

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP  SCEFVIR++GVFGV
Sbjct: 270 LPEQSCEFVIRRDGVFGV 287


>ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog [Fragaria vesca subsp.
           vesca]
          Length = 284

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/78 (55%), Positives = 52/78 (66%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RVCPALGL+W+NCVN+RLFLSR  E +G E G             +   +R + V+FAPH
Sbjct: 216 RVCPALGLAWSNCVNSRLFLSRNEEIVGRENG-----------EMSRHTKRRLDVVFAPH 264

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP SSCEFVI + GVFGV
Sbjct: 265 LPPSSCEFVITEYGVFGV 282


>ref|XP_006474178.1| PREDICTED: DNA repair protein XRCC3 homolog [Citrus sinensis]
          Length = 302

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -3

Query: 453 VCPALGLSWANCVNTRLFLSRTVETLGEERGFA--AVADEEDGNFAAGRIRRYIHVIFAP 280
           +CPALG++WANCVN+RLFLSR  + +  E       V      +F   R RR +HV+FAP
Sbjct: 222 ICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAP 281

Query: 279 HLPSSSCEFVIRKEGVFG 226
           HL  +SCEF I +EGVFG
Sbjct: 282 HLADTSCEFEITREGVFG 299


>ref|XP_006453378.1| hypothetical protein CICLE_v10008928mg [Citrus clementina]
           gi|557556604|gb|ESR66618.1| hypothetical protein
           CICLE_v10008928mg [Citrus clementina]
          Length = 321

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -3

Query: 453 VCPALGLSWANCVNTRLFLSRTVETLGEERGFA--AVADEEDGNFAAGRIRRYIHVIFAP 280
           +CPALG++WANCVN+RLFLSR  + +  E       V      +F   R RR +HV+FAP
Sbjct: 241 ICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAP 300

Query: 279 HLPSSSCEFVIRKEGVFG 226
           HL  +SCEF I +EGVFG
Sbjct: 301 HLADTSCEFEITREGVFG 318


>ref|XP_003572626.1| PREDICTED: DNA repair protein XRCC3 homolog [Brachypodium
           distachyon]
          Length = 288

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           +V PALGL+WANCVNTRLFL+R V                DGN   G ++R++ V+FAPH
Sbjct: 224 QVSPALGLAWANCVNTRLFLTREV----------------DGN--GGSVKRHMKVVFAPH 265

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP  +CEFVIR+ GVFGV
Sbjct: 266 LPERTCEFVIRRTGVFGV 283


>ref|XP_004243278.1| PREDICTED: DNA repair protein XRCC3 homolog [Solanum lycopersicum]
          Length = 285

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFA-AGRIRRYIHVIFAP 280
           +VC ALGLSWANCVNTRLFLSR      EER    VA E +G+   + + RR+I V FAP
Sbjct: 214 KVCAALGLSWANCVNTRLFLSRQ-----EER----VAREVNGDDCFSTQTRRFIRVAFAP 264

Query: 279 HLPSSSCEFVIRKEGVFGV 223
           HLP S CEFVI +E +FG+
Sbjct: 265 HLPDSYCEFVISREKIFGL 283


>ref|XP_006279666.1| hypothetical protein CARUB_v10026831mg, partial [Capsella rubella]
           gi|482548370|gb|EOA12564.1| hypothetical protein
           CARUB_v10026831mg, partial [Capsella rubella]
          Length = 308

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/78 (47%), Positives = 57/78 (73%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RV PALGL+WANCVN+R F+SR  +T+ +ER   +  DE   +  + R +R + ++F+P+
Sbjct: 232 RVVPALGLAWANCVNSRFFISRGDDTICKER---SENDESGSSSVSRRAQRRLDIVFSPY 288

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP++SCEF+I +EG+ GV
Sbjct: 289 LPATSCEFMITREGICGV 306


>gb|EMT33552.1| DNA repair XRCC3-like protein [Aegilops tauschii]
          Length = 284

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           +V PALGL+WANCVNTRLFL+R V++ G                  G  RR++ V FAPH
Sbjct: 220 QVSPALGLAWANCVNTRLFLTREVDSNG------------------GSARRHMKVAFAPH 261

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP  +CEFVIR++GVFGV
Sbjct: 262 LPVRTCEFVIRRDGVFGV 279


>gb|EMS60012.1| DNA repair protein XRCC3-like protein [Triticum urartu]
          Length = 362

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           +V PALGL+WANCVNTRLFL+R V++ G                  G  RR++ V FAPH
Sbjct: 238 QVSPALGLAWANCVNTRLFLTREVDSNG------------------GSARRHMKVAFAPH 279

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP  +CEFVIR++GVFGV
Sbjct: 280 LPVRTCEFVIRRDGVFGV 297


>ref|XP_002454016.1| hypothetical protein SORBIDRAFT_04g023090 [Sorghum bicolor]
           gi|241933847|gb|EES06992.1| hypothetical protein
           SORBIDRAFT_04g023090 [Sorghum bicolor]
          Length = 292

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/78 (52%), Positives = 50/78 (64%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAGRIRRYIHVIFAPH 277
           RV PALG++WANCVN RLFL+R V                 G+ A+G  RR + V FAPH
Sbjct: 226 RVSPALGIAWANCVNMRLFLTREV----------------GGDGASGSARRRMKVAFAPH 269

Query: 276 LPSSSCEFVIRKEGVFGV 223
           LP  SCEF+IR++GVFGV
Sbjct: 270 LPERSCEFMIRRDGVFGV 287


>ref|XP_006348882.1| PREDICTED: DNA repair protein XRCC3 homolog [Solanum tuberosum]
          Length = 287

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 45/79 (56%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -3

Query: 456 RVCPALGLSWANCVNTRLFLSRTVETLGEERGFAAVADEEDGNFAAG-RIRRYIHVIFAP 280
           +VC ALGLSWANCVNTRLFLSR      EER    VA E +G+     + +R+I V FAP
Sbjct: 216 KVCAALGLSWANCVNTRLFLSRQ-----EER----VAQEVNGDDCFNTQTQRFIRVAFAP 266

Query: 279 HLPSSSCEFVIRKEGVFGV 223
           HLP S CEFVI  E +FG+
Sbjct: 267 HLPDSYCEFVITGEKIFGL 285