BLASTX nr result
ID: Rheum21_contig00037817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037817
(262 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen... 76 4e-12
emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera] 76 4e-12
gb|EXC29932.1| hypothetical protein L484_015125 [Morus notabilis] 76 5e-12
gb|EOY09887.1| Tetratricopeptide-like helical, putative isoform ... 74 3e-11
gb|EMJ09238.1| hypothetical protein PRUPE_ppa002768mg [Prunus pe... 73 5e-11
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,... 72 1e-10
ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group] g... 68 1e-09
gb|EEE66861.1| hypothetical protein OsJ_23658 [Oryza sativa Japo... 68 1e-09
tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea m... 67 3e-09
ref|XP_002461718.1| hypothetical protein SORBIDRAFT_02g007035 [S... 66 6e-09
gb|EMT18641.1| hypothetical protein F775_21333 [Aegilops tauschii] 65 7e-09
gb|EOY05619.1| Pentatricopeptide repeat (PPR) superfamily protei... 65 9e-09
ref|XP_004959110.1| PREDICTED: putative pentatricopeptide repeat... 64 3e-08
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,... 64 3e-08
ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]... 62 1e-07
sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-c... 62 1e-07
emb|CAB86438.1| putative protein [Arabidopsis thaliana] 62 1e-07
ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citr... 61 1e-07
ref|XP_003624159.1| Pentatricopeptide repeat-containing protein ... 61 1e-07
ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/86 (40%), Positives = 60/86 (69%)
Frame = -2
Query: 261 FKQMPKCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADK 82
FK +P+ + + N + + ++ E+V WSSM++G++QN ++E AL+TF M+ ++ DK
Sbjct: 578 FKHLPQ-ESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDK 636
Query: 81 FSLTSIVSASADCGMLEFGQQVNAMV 4
F+LTS+VSA A G+LE G+QV+ +
Sbjct: 637 FTLTSVVSACASAGVLELGRQVHGYI 662
>emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/86 (40%), Positives = 59/86 (68%)
Frame = -2
Query: 261 FKQMPKCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADK 82
FK +P+ + + N + + ++ E+V WSSM++G++QN +E AL+TF M+ ++ DK
Sbjct: 288 FKHLPR-ESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDK 346
Query: 81 FSLTSIVSASADCGMLEFGQQVNAMV 4
F+LTS+VSA A G+LE G+QV+ +
Sbjct: 347 FTLTSVVSACASAGVLELGRQVHGYI 372
>gb|EXC29932.1| hypothetical protein L484_015125 [Morus notabilis]
Length = 705
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = -2
Query: 261 FKQMPKCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADK 82
F++MP N + E MTE + WSS+IAG+++N +E ALQTF M+ +GI D
Sbjct: 274 FRKMPLVYLNSPHSTAAHEHEMTEILAWSSLIAGYVRNDDYEGALQTFISMVREGIGVDG 333
Query: 81 FSLTSIVSASADCGMLEFGQQVNAMV 4
F++T+I S A+ G+L GQQ++A+V
Sbjct: 334 FTVTTIASMCANVGILTLGQQIHALV 359
>gb|EOY09887.1| Tetratricopeptide-like helical, putative isoform 1 [Theobroma
cacao] gi|508717991|gb|EOY09888.1|
Tetratricopeptide-like helical, putative isoform 1
[Theobroma cacao]
Length = 752
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/69 (49%), Positives = 53/69 (76%)
Frame = -2
Query: 210 REASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLE 31
+E S+ E V WSS+++GF+ N + E A +TF M+S+ I+ D+F++TSIVSA A+ G+LE
Sbjct: 338 KENSIEEIVSWSSIVSGFVLNGEIEDAFKTFTSMISKEIEVDRFTVTSIVSACANSGVLE 397
Query: 30 FGQQVNAMV 4
GQQV+A++
Sbjct: 398 LGQQVHALI 406
>gb|EMJ09238.1| hypothetical protein PRUPE_ppa002768mg [Prunus persica]
Length = 635
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = -2
Query: 261 FKQMPKCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADK 82
FK +P + N ++ + TE V WSSM++G+++N ++E+AL TF M+ + I D+
Sbjct: 208 FKTLPL----RTNSKFTCHETKTEVVSWSSMVSGYVRNGEYEYALLTFCSMVREQIMVDR 263
Query: 81 FSLTSIVSASADCGMLEFGQQVNAMV 4
FSLTSIVSA A+ G+L GQ ++A +
Sbjct: 264 FSLTSIVSACANVGILLLGQHIHAHI 289
>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 832
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/64 (50%), Positives = 50/64 (78%)
Frame = -2
Query: 192 ETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVN 13
E V WSSMI+G+++N ++E+AL+TF M+ + + DKF+LTS+VSA A+ G LE G+Q++
Sbjct: 587 EIVSWSSMISGYVRNGEYEYALRTFISMVHEQVLVDKFTLTSVVSACANTGCLELGRQIH 646
Query: 12 AMVL 1
A +L
Sbjct: 647 AHIL 650
>ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|50510012|dbj|BAD30625.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|113610797|dbj|BAF21175.1|
Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -2
Query: 180 WSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVNAMV 4
WS+M+AG++QN + E AL FR ML +G+ AD+F+LTS+ +A A+ GM+E G+QV+ V
Sbjct: 316 WSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCV 374
>gb|EEE66861.1| hypothetical protein OsJ_23658 [Oryza sativa Japonica Group]
Length = 728
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -2
Query: 180 WSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVNAMV 4
WS+M+AG++QN + E AL FR ML +G+ AD+F+LTS+ +A A+ GM+E G+QV+ V
Sbjct: 316 WSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCV 374
>tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -2
Query: 216 YNREASMTET--VCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADC 43
++R + TE WS+M+AG++QN + E AL+ FR ML +G+ A +F LTS+ SA A+
Sbjct: 316 FDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANA 375
Query: 42 GMLEFGQQVNAMV 4
GM+E G+QV+ V
Sbjct: 376 GMVEQGRQVHGFV 388
>ref|XP_002461718.1| hypothetical protein SORBIDRAFT_02g007035 [Sorghum bicolor]
gi|241925095|gb|EER98239.1| hypothetical protein
SORBIDRAFT_02g007035 [Sorghum bicolor]
Length = 551
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -2
Query: 216 YNREASMTETV--CWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADC 43
++R + T+ + WS+M+AG++QN + E AL+ FR ML +G+ A +F LTS+ +A A+
Sbjct: 304 FDRWSEFTDDIQFAWSAMVAGYIQNGREEEALEFFRRMLREGVPAGQFILTSVAAACANA 363
Query: 42 GMLEFGQQVNAMV 4
GM+E G+QV+ V
Sbjct: 364 GMVEQGRQVHGFV 376
>gb|EMT18641.1| hypothetical protein F775_21333 [Aegilops tauschii]
Length = 645
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = -2
Query: 180 WSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVNAMV 4
WS+M+ G++QN + E A + FR ML QG+ AD+F+LTS V+A A+ GM+E G+QV+ V
Sbjct: 161 WSTMVTGYVQNGREEEAFEFFRLMLRQGVAADQFTLTSAVAACANAGMVEQGRQVHGCV 219
>gb|EOY05619.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 788
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = -2
Query: 186 VCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVNAM 7
V W++MI+G++ + ++E AL FR M GIK D+F+ TSI+S A G+ + GQQV+A
Sbjct: 246 VAWNAMISGYVHHGRYEEALDMFRKMYFMGIKMDEFTYTSIISGCAHAGLFQLGQQVHAY 305
Query: 6 VL 1
VL
Sbjct: 306 VL 307
>ref|XP_004959110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Setaria italica]
Length = 727
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/59 (45%), Positives = 44/59 (74%)
Frame = -2
Query: 180 WSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVNAMV 4
WS+M+AG++QN + E A++ FR ML +G+ A++F LTS+ +A + GM+E G+QV+ V
Sbjct: 324 WSTMVAGYVQNGREEEAIEFFRRMLREGVPAEQFILTSVAAACGNAGMVEQGRQVHGFV 382
>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 574
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = -2
Query: 186 VCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVNAM 7
V W++MI+G+M ++ AL+ FR M G+K D+F+ TSI+SA A+ G L+ G+QV+A
Sbjct: 259 VVWNAMISGYMHRGLYQEALEMFRKMYLAGLKLDEFTYTSIISACANAGFLQHGKQVHAY 318
Query: 6 VL 1
+L
Sbjct: 319 IL 320
>ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| RNA editing factor OTP86
[Arabidopsis thaliana]
Length = 884
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/82 (35%), Positives = 52/82 (63%)
Frame = -2
Query: 246 KCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTS 67
+C + Q R R+ + + V W+S+I G++QN ++ AL+ F DM++ G K+D+ S+TS
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 66 IVSASADCGMLEFGQQVNAMVL 1
I++AS L G +++A V+
Sbjct: 392 IIAASGRLSNLLAGMELHAYVI 413
>sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/82 (35%), Positives = 52/82 (63%)
Frame = -2
Query: 246 KCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTS 67
+C + Q R R+ + + V W+S+I G++QN ++ AL+ F DM++ G K+D+ S+TS
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 66 IVSASADCGMLEFGQQVNAMVL 1
I++AS L G +++A V+
Sbjct: 392 IIAASGRLSNLLAGMELHAYVI 413
>emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/82 (35%), Positives = 52/82 (63%)
Frame = -2
Query: 246 KCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTS 67
+C + Q R R+ + + V W+S+I G++QN ++ AL+ F DM++ G K+D+ S+TS
Sbjct: 295 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 354
Query: 66 IVSASADCGMLEFGQQVNAMVL 1
I++AS L G +++A V+
Sbjct: 355 IIAASGRLSNLLAGMELHAYVI 376
>ref|XP_006451257.1| hypothetical protein CICLE_v10010361mg [Citrus clementina]
gi|568883054|ref|XP_006494315.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Citrus sinensis]
gi|557554483|gb|ESR64497.1| hypothetical protein
CICLE_v10010361mg [Citrus clementina]
Length = 696
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -2
Query: 192 ETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTSIVSASADCGMLEFGQQVN 13
+ VCW++MI G+ QN K E AL F +MLS+ ++ DKFS++S+VS+ A L GQ V+
Sbjct: 287 DNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVH 346
>ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 755
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/85 (35%), Positives = 51/85 (60%)
Frame = -2
Query: 258 KQMPKCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKF 79
K +P K N + V WSSM++G++ N K+E ++TFR M+ + I D
Sbjct: 325 KDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR 384
Query: 78 SLTSIVSASADCGMLEFGQQVNAMV 4
++ +I+SA A+ G+LEFG+Q++A +
Sbjct: 385 TVATIISACANAGILEFGKQIHAYI 409
>ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = -2
Query: 246 KCKENKQNHRYNREASMTETVCWSSMIAGFMQNSKWEHALQTFRDMLSQGIKADKFSLTS 67
KC + + R S T+++CW+SMI+ F QN K E A+ FR M G K D SL+S
Sbjct: 495 KCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSS 554
Query: 66 IVSASADCGMLEFGQQVNAMVL 1
+S++A+ L +G++++ V+
Sbjct: 555 ALSSAANLPALYYGKEMHGYVI 576