BLASTX nr result
ID: Rheum21_contig00037802
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037802
(238 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB77045.1| hypothetical protein L484_014171 [Morus notabilis] 93 3e-17
ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
emb|CBI23204.3| unnamed protein product [Vitis vinifera] 87 3e-15
ref|XP_004295288.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_004486315.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
gb|ESW19690.1| hypothetical protein PHAVU_006G147000g [Phaseolus... 81 2e-13
gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein... 79 8e-13
ref|XP_004233783.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_002874797.1| pentatricopeptide repeat-containing protein ... 77 2e-12
gb|EPS71960.1| hypothetical protein M569_02796 [Genlisea aurea] 77 3e-12
ref|XP_006396695.1| hypothetical protein EUTSA_v10028467mg [Eutr... 75 9e-12
ref|XP_006289487.1| hypothetical protein CARUB_v10003020mg [Caps... 74 2e-11
ref|NP_192346.1| pentatricopeptide repeat-containing protein [Ar... 73 4e-11
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ... 57 3e-06
ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat... 56 4e-06
>gb|EXB77045.1| hypothetical protein L484_014171 [Morus notabilis]
Length = 746
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -2
Query: 222 AAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLG 43
A ST+SFNA I RLSS+ H++VL TFSSML+SNT D HT+PS+FKAC SL LF LG
Sbjct: 17 AKTTSTRSFNAIINRLSSQASHHEVLITFSSMLQSNTPPDTHTFPSLFKACASLHLFPLG 76
Query: 42 RSLHQRVTVGGYS 4
SLHQ V V G+S
Sbjct: 77 ISLHQCVVVNGFS 89
>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = -2
Query: 210 STKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLH 31
+TKS+NA I RLS+ G DVL T+SSML ++T DAHT+PS+ KACTSL LFS G S H
Sbjct: 12 ATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFH 71
Query: 30 QRVTVGGYS 4
QRV V GYS
Sbjct: 72 QRVIVDGYS 80
>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = -2
Query: 210 STKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLH 31
+TKS+NA I RLS+ G DVL T+SSML ++T DAHT+PS+ KACTSL LFS G S H
Sbjct: 12 ATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFH 71
Query: 30 QRVTVGGYS 4
QRV V GYS
Sbjct: 72 QRVIVDGYS 80
>ref|XP_004295288.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Fragaria vesca subsp. vesca]
Length = 748
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -2
Query: 219 AVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGR 40
A +T++FNA I RLSS+ H++VL FSSMLK++ D HT+PS+ KACTSL LF G
Sbjct: 22 ATTTTRAFNAIINRLSSQRSHHEVLAAFSSMLKAHIPPDTHTFPSLLKACTSLNLFGHGV 81
Query: 39 SLHQRVTVGGY 7
SLHQRV V G+
Sbjct: 82 SLHQRVVVNGF 92
>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = -2
Query: 207 TKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLHQ 28
TKSFN+ ++RLS +G H+ VL+T+ SM K++T DA+T+PS+FKACT+L LFS G SLHQ
Sbjct: 14 TKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQ 73
Query: 27 RVTVGGYS 4
V V G S
Sbjct: 74 SVVVNGLS 81
>ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = -2
Query: 207 TKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLHQ 28
TKSFN+ ++RLS +G H+ VL+T+ SM K++T DA+T+PS+FKACT+L LFS G SLHQ
Sbjct: 14 TKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQ 73
Query: 27 RVTVGGYS 4
V V G S
Sbjct: 74 SVVVNGLS 81
>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -2
Query: 222 AAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLG 43
+A + SFNA I SS+G H VL T++SMLK++ +DA+T+PS+ KAC+SL LFSLG
Sbjct: 29 SASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLG 88
Query: 42 RSLHQRVTVGGYS 4
SLHQR+ V G S
Sbjct: 89 LSLHQRILVSGLS 101
>ref|XP_004486315.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cicer arietinum]
Length = 740
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = -2
Query: 219 AVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGR 40
A +T SFNA I R S++G H VL T+SSML S+ +DA+T+PS+ KAC+SL LF LG
Sbjct: 14 ASATTNSFNAIINRHSTQGAHRQVLITYSSMLNSHIPSDAYTFPSLLKACSSLNLFHLGL 73
Query: 39 SLHQRVTVGGYS 4
+LHQR+ V G S
Sbjct: 74 TLHQRILVNGLS 85
>ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like isoform X1 [Solanum tuberosum]
gi|565362832|ref|XP_006348148.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g04370-like isoform X2 [Solanum tuberosum]
gi|565362834|ref|XP_006348149.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g04370-like isoform X3 [Solanum tuberosum]
Length = 753
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = -2
Query: 222 AAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLG 43
AA +TKSFNA + RLSSEGFH+ L T++SMLKS+ D T+P++ KAC SL L G
Sbjct: 23 AAAAATKSFNATLHRLSSEGFHHHALLTYNSMLKSSVPPDPFTFPTLLKACISLNLLRHG 82
Query: 42 RSLHQRVTVGGYS 4
LHQ V V G+S
Sbjct: 83 LLLHQHVVVNGFS 95
>gb|ESW19690.1| hypothetical protein PHAVU_006G147000g [Phaseolus vulgaris]
Length = 764
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -2
Query: 222 AAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLG 43
+A +T S NA I SS+G H VL T++SMLK++ +DA+T+PS+ +AC+SL LFSLG
Sbjct: 29 SASATTNSLNAIINHYSSQGAHRQVLVTYASMLKTHVPSDAYTFPSLLRACSSLNLFSLG 88
Query: 42 RSLHQRVTVGGYS 4
SLHQRV V G S
Sbjct: 89 LSLHQRVLVKGLS 101
>gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 1250
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/69 (55%), Positives = 56/69 (81%)
Frame = -2
Query: 210 STKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLH 31
STKSFN+ I LSS+G +++VL T+++ML S+T D++T+PS+ KACTSL LFS+G S+H
Sbjct: 11 STKSFNSIINNLSSQGSYHEVLVTYTTMLNSSTP-DSYTFPSLLKACTSLNLFSIGLSVH 69
Query: 30 QRVTVGGYS 4
Q+V + G+S
Sbjct: 70 QQVILRGFS 78
>ref|XP_004233783.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Solanum lycopersicum]
Length = 753
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = -2
Query: 222 AAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLG 43
AA +TKSFNA + RLSSEG H+ L T+ SMLKS+ D T+P++ KAC SL L G
Sbjct: 23 AAAATTKSFNATLHRLSSEGAHHHALLTYDSMLKSSVRPDPFTFPTLLKACISLNLLPHG 82
Query: 42 RSLHQRVTVGGYS 4
LHQ V V G+S
Sbjct: 83 LLLHQHVVVNGFS 95
>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -2
Query: 210 STKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLH 31
+T S NA I S++G H+ VL T++SMLK++ +DA+T+PS+ KAC+ L LFSLG +LH
Sbjct: 25 TTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLH 84
Query: 30 QRVTVGGYS 4
QR+ V G S
Sbjct: 85 QRILVSGLS 93
>ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297320634|gb|EFH51056.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 748
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -2
Query: 210 STKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLH 31
STK FN+ I LSS G H VL TFSSML + D T+PS+ KACTSL L S G S+H
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIH 69
Query: 30 QRVTVGGYS 4
Q+V V G+S
Sbjct: 70 QKVLVNGFS 78
>gb|EPS71960.1| hypothetical protein M569_02796 [Genlisea aurea]
Length = 751
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -2
Query: 228 ADAAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKS-NTAADAHTYPSVFKACTSLGLF 52
A A +S NA + RLSSEGFH +VL F+SMLKS T D TYPS KAC +L
Sbjct: 16 ATIAASGLRSLNATVGRLSSEGFHREVLLAFASMLKSPETTPDFFTYPSALKACIALRFL 75
Query: 51 SLGRSLHQRVTVGGYS 4
SL S+HQR+ V GY+
Sbjct: 76 SLSLSIHQRIIVSGYA 91
>ref|XP_006396695.1| hypothetical protein EUTSA_v10028467mg [Eutrema salsugineum]
gi|557097712|gb|ESQ38148.1| hypothetical protein
EUTSA_v10028467mg [Eutrema salsugineum]
Length = 726
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/69 (55%), Positives = 46/69 (66%)
Frame = -2
Query: 210 STKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLH 31
STK+FN+ I SS G H VL TFSSML + DA T+PS+ KAC SL L S G S+H
Sbjct: 10 STKTFNSLINHFSSHGDHLQVLSTFSSMLANRFQPDAFTFPSLLKACASLQLLSFGLSIH 69
Query: 30 QRVTVGGYS 4
Q+V V G+S
Sbjct: 70 QQVLVNGFS 78
>ref|XP_006289487.1| hypothetical protein CARUB_v10003020mg [Capsella rubella]
gi|482558193|gb|EOA22385.1| hypothetical protein
CARUB_v10003020mg [Capsella rubella]
Length = 748
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/75 (50%), Positives = 47/75 (62%)
Frame = -2
Query: 228 ADAAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFS 49
A + + STK FN+ I SS G + VL TFSSML D T+PS+ KAC SL LFS
Sbjct: 4 ASSVLNSTKYFNSLINHFSSHGEYKQVLATFSSMLAKRLLPDTFTFPSLLKACASLQLFS 63
Query: 48 LGRSLHQRVTVGGYS 4
G S+HQ+V V G+S
Sbjct: 64 FGLSIHQKVLVYGFS 78
>ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g04370 gi|4982476|gb|AAD36944.1|AF069441_4
hypothetical protein [Arabidopsis thaliana]
gi|7267194|emb|CAB77905.1| hypothetical protein
[Arabidopsis thaliana] gi|332656985|gb|AEE82385.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 729
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = -2
Query: 210 STKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFSLGRSLH 31
STK FN+ I LSS G H VL TFSSML + D T+PS+ KAC SL S G S+H
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 30 QRVTVGGYS 4
Q+V V G+S
Sbjct: 70 QQVLVNGFS 78
>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = -2
Query: 228 ADAAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFS 49
+D A+ S+ + A I+ +G H D L+ F M ++ ADA TY S+ +AC SL +
Sbjct: 459 SDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLT 518
Query: 48 LGRSLHQRVTVGGY 7
LG+ LH + GY
Sbjct: 519 LGKQLHSHIIGSGY 532
>ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cicer arietinum]
Length = 812
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = -2
Query: 228 ADAAVISTKSFNAAITRLSSEGFHNDVLRTFSSMLKSNTAADAHTYPSVFKACTSLGLFS 49
AD A S+ + A I+ +G H D L+ F M ++ ADA TY S+ +AC SL +
Sbjct: 397 ADLAHQSSVPWTAMISAYVQKGLHEDGLKLFIEMQRAKIGADAATYASIVRACASLASLT 456
Query: 48 LGRSLHQRVTVGGY 7
LG+ LH + GY
Sbjct: 457 LGKQLHSHINRSGY 470