BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00037751
         (268 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178215.1| zinc ion binding / nucleic acid binding protein...    80   3e-13
ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, part...    74   3e-11
ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, part...    73   5e-11
ref|XP_006305928.1| hypothetical protein CARUB_v10011149mg [Caps...    72   8e-11
ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, part...    72   8e-11
ref|XP_006301503.1| hypothetical protein CARUB_v10021929mg, part...    72   1e-10
ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Caps...    72   1e-10
ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, part...    71   2e-10
emb|CAB96840.1| putative protein [Arabidopsis thaliana] gi|34365...    70   3e-10
ref|XP_006295613.1| hypothetical protein CARUB_v10024726mg, part...    70   4e-10
ref|XP_006286068.1| hypothetical protein CARUB_v10007601mg, part...    69   5e-10
ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, part...    69   7e-10
ref|XP_006295690.1| hypothetical protein CARUB_v10024806mg [Caps...    69   7e-10
gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebenne...    69   7e-10
ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, part...    68   1e-09
ref|XP_006294233.1| hypothetical protein CARUB_v10023230mg, part...    68   1e-09
ref|XP_006287598.1| hypothetical protein CARUB_v10000810mg, part...    68   1e-09
ref|XP_006301940.1| hypothetical protein CARUB_v10022418mg, part...    68   1e-09
ref|XP_006282222.1| hypothetical protein CARUB_v10028495mg, part...    67   2e-09
ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, part...    67   3e-09

>ref|NP_178215.1| zinc ion binding / nucleic acid binding protein [Arabidopsis
           thaliana] gi|6598620|gb|AAF18653.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250297|gb|AEC05391.1| zinc
           ion binding / nucleic acid binding protein [Arabidopsis
           thaliana]
          Length = 515

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 33/75 (44%), Positives = 53/75 (70%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           + DE + E + + FP+GE  +PV+TIG E+LEA+   WK  +IVK LG+ +P  V+N K+
Sbjct: 40  IDDEFVRERVGLEFPDGEDEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKL 99

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P+G + ++DL
Sbjct: 100 RELWKPSGVMTVMDL 114


>ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, partial [Capsella rubella]
           gi|482561670|gb|EOA25861.1| hypothetical protein
           CARUB_v10019240mg, partial [Capsella rubella]
          Length = 405

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 32/75 (42%), Positives = 48/75 (64%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L+DE +   M++ FP+GE  +P VTIGSE+L  +   WK  +IVK LG  +P   M+ K+
Sbjct: 8   LADEFVKARMDLAFPDGEEGEPFVTIGSEVLTVMRGLWKRCMIVKVLGRNIPIAAMSRKL 67

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + + DL
Sbjct: 68  RELWKPKGAMHVTDL 82


>ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, partial [Capsella rubella]
           gi|482565486|gb|EOA29675.1| hypothetical protein
           CARUB_v10015822mg, partial [Capsella rubella]
          Length = 333

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 29/75 (38%), Positives = 51/75 (68%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           LSDE +T  M + FP+G+  +PV+T+G E++  + S WK+ ++VK L   VP   ++ ++
Sbjct: 37  LSDEFVTARMRLEFPDGKHGEPVITVGQEVVSVMRSLWKNCMLVKVLDRHVPIAALSKRL 96

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W PTG + ++DL
Sbjct: 97  RELWKPTGGMSVLDL 111


>ref|XP_006305928.1| hypothetical protein CARUB_v10011149mg [Capsella rubella]
           gi|482574639|gb|EOA38826.1| hypothetical protein
           CARUB_v10011149mg [Capsella rubella]
          Length = 245

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 30/75 (40%), Positives = 51/75 (68%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           + +E ++  +++ FP GE  +PV+TIG E+L+A+ S WK  ++VK LG  V   V++ K+
Sbjct: 12  IDNEFVSSRIQLDFPYGEDGEPVITIGEEVLDAMNSLWKQCIVVKVLGRNVSLQVLSRKL 71

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G I ++DL
Sbjct: 72  KEMWEPIGAIYVVDL 86


>ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, partial [Capsella rubella]
           gi|482547819|gb|EOA12095.1| hypothetical protein
           CARUB_v10016517mg, partial [Capsella rubella]
          Length = 457

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 30/78 (38%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 EPLSDE-MLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMN 57
           E L D+  ++E + + FP+GE  +P +TIGSE+L+ +   WK  +IVK LG ++    ++
Sbjct: 33  ETLMDKAFVSERLRLDFPDGEDGEPFITIGSEVLDVMKGLWKQCIIVKVLGRSIVLSALS 92

Query: 56  WKIQEIWLPTGKIRLIDL 3
            K++E+W PTG++ ++DL
Sbjct: 93  RKLKELWKPTGEMSVVDL 110


>ref|XP_006301503.1| hypothetical protein CARUB_v10021929mg, partial [Capsella rubella]
           gi|482570213|gb|EOA34401.1| hypothetical protein
           CARUB_v10021929mg, partial [Capsella rubella]
          Length = 477

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 29/75 (38%), Positives = 50/75 (66%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L+   ++E +++ FP+GE  +PV+TIGSE+L+ +   WK  +IVK LG  V    ++ K+
Sbjct: 40  LNSAFVSERLQVEFPDGEDGEPVITIGSEVLDVMKGLWKQCIIVKVLGRNVAISALSRKL 99

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + ++DL
Sbjct: 100 RELWKPNGGMYVLDL 114


>ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Capsella rubella]
           gi|482565484|gb|EOA29673.1| hypothetical protein
           CARUB_v10015820mg [Capsella rubella]
          Length = 503

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 29/75 (38%), Positives = 50/75 (66%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L+   ++E +++ FP+GE  +PV+TIGSE+L+ +   WK  +IVK LG  V    ++ K+
Sbjct: 40  LNSAFVSERLQVEFPDGEDGEPVITIGSEVLDVMKGLWKQCIIVKVLGRNVAISALSRKL 99

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + ++DL
Sbjct: 100 RELWKPNGGMYVLDL 114


>ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, partial [Capsella rubella]
           gi|482565360|gb|EOA29549.1| hypothetical protein
           CARUB_v10015577mg, partial [Capsella rubella]
          Length = 476

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 28/75 (37%), Positives = 50/75 (66%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L+   ++E +++ FP+GE  +PV+TIGSE+++ +   WK  +IVK LG  V    ++ K+
Sbjct: 40  LNSAFVSERLQVEFPDGEDGEPVITIGSEVMDVMKGLWKQCIIVKVLGRNVAISALSRKL 99

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + ++DL
Sbjct: 100 RELWKPNGGMYVLDL 114


>emb|CAB96840.1| putative protein [Arabidopsis thaliana] gi|34365661|gb|AAQ65142.1|
           At5g10850 [Arabidopsis thaliana]
           gi|51970522|dbj|BAD43953.1| putative protein
           [Arabidopsis thaliana]
          Length = 181

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/75 (42%), Positives = 50/75 (66%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L DE ++E M + FP+GE  +PV+TIGSE+L A+    K+SLIVK  G  +    ++ K+
Sbjct: 56  LDDEFVSEQMTLEFPDGEDGEPVITIGSEVLAAMNGLLKNSLIVKVPGRNMTISALSRKL 115

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + ++DL
Sbjct: 116 REMWKPRGAMSVVDL 130


>ref|XP_006295613.1| hypothetical protein CARUB_v10024726mg, partial [Capsella rubella]
           gi|482564321|gb|EOA28511.1| hypothetical protein
           CARUB_v10024726mg, partial [Capsella rubella]
          Length = 489

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/72 (40%), Positives = 48/72 (66%)
 Frame = -3

Query: 218 EMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKIQEI 39
           E +  H ++TFP+G   +PV+T+G E++EA+   WK  +IVK LG ++   VM+ K++E+
Sbjct: 40  EFVMSHTKLTFPDGVNGEPVITVGREVMEAMNGLWKKCMIVKVLGRSMSIAVMSRKLKEM 99

Query: 38  WLPTGKIRLIDL 3
           W P G + + DL
Sbjct: 100 WRPQGAMVVTDL 111


>ref|XP_006286068.1| hypothetical protein CARUB_v10007601mg, partial [Capsella rubella]
           gi|482554773|gb|EOA18966.1| hypothetical protein
           CARUB_v10007601mg, partial [Capsella rubella]
          Length = 459

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 29/72 (40%), Positives = 47/72 (65%)
 Frame = -3

Query: 218 EMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKIQEI 39
           E +  H  +TFP+G   +PV+T+G E++EA+   WK  +IVK LG ++   VM+ K++E+
Sbjct: 40  EFVMSHTNLTFPDGVNGEPVITVGREVMEAMNGLWKKCMIVKVLGRSMSIAVMSRKLKEM 99

Query: 38  WLPTGKIRLIDL 3
           W P G + + DL
Sbjct: 100 WRPQGAMVVTDL 111


>ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, partial [Capsella rubella]
           gi|482564602|gb|EOA28792.1| hypothetical protein
           CARUB_v10025024mg, partial [Capsella rubella]
          Length = 507

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/75 (41%), Positives = 47/75 (62%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L +E +   M + FP G+  + VVTIG E++ A+ S WK+ +IVK LG  VP   +  K+
Sbjct: 58  LDEEFVASRMRLEFPNGDDGEGVVTIGQEVISAMTSLWKNCMIVKVLGRNVPLAPLLRKL 117

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + +IDL
Sbjct: 118 RELWAPKGGMTVIDL 132


>ref|XP_006295690.1| hypothetical protein CARUB_v10024806mg [Capsella rubella]
           gi|482564398|gb|EOA28588.1| hypothetical protein
           CARUB_v10024806mg [Capsella rubella]
          Length = 185

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 29/75 (38%), Positives = 49/75 (65%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L++E +   M + FP+GE  + VVT+G +++ A+   WK+ +IVK LG  VP   +  K+
Sbjct: 36  LAEEFIASRMRLEFPDGEDGEGVVTVGQDVIAAMNGLWKNCMIVKVLGRHVPIASLVRKL 95

Query: 47  QEIWLPTGKIRLIDL 3
           +EIW+P G + ++DL
Sbjct: 96  REIWVPKGGMHVVDL 110


>gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebennensis]
          Length = 496

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 EEDREPLSDEMLTEH-MEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPY 69
           E+D  P S  M     + + FP GE  +PV+T+G E+L+A++  WK  +IVK LG  V  
Sbjct: 27  EKDMPPESLRMGRHRGLSLEFPNGEDGEPVITVGREVLDAMSGLWKKCIIVKVLGRNVSV 86

Query: 68  DVMNWKIQEIWLPTGKIRLIDL 3
            V++ K++E+W P G++ ++DL
Sbjct: 87  SVLSRKLRELWKPVGEMSVMDL 108


>ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, partial [Capsella rubella]
           gi|482564485|gb|EOA28675.1| hypothetical protein
           CARUB_v10024899mg, partial [Capsella rubella]
          Length = 451

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 27/75 (36%), Positives = 47/75 (62%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L D  +   + + FP G   +P +TIG E++  +   WK+ +IVK LG  +P  V+N K+
Sbjct: 40  LDDAFVKARVRVDFPNGRTGEPEITIGEEVISVMHGLWKNCMIVKVLGRQIPVAVLNRKL 99

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P+G++ ++DL
Sbjct: 100 KELWKPSGRMYVMDL 114


>ref|XP_006294233.1| hypothetical protein CARUB_v10023230mg, partial [Capsella rubella]
           gi|482562941|gb|EOA27131.1| hypothetical protein
           CARUB_v10023230mg, partial [Capsella rubella]
          Length = 440

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 27/75 (36%), Positives = 50/75 (66%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           +  E + E +++ FP+G   +PVVT+G E+LEA+   WK+ ++VK LG  +   V++ ++
Sbjct: 40  IDHEFVKERVKVVFPDGVHGEPVVTVGKELLEAMNGLWKNCMVVKVLGRNMSISVLSKRL 99

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + ++DL
Sbjct: 100 REMWKPRGVMHVVDL 114


>ref|XP_006287598.1| hypothetical protein CARUB_v10000810mg, partial [Capsella rubella]
           gi|482556304|gb|EOA20496.1| hypothetical protein
           CARUB_v10000810mg, partial [Capsella rubella]
          Length = 493

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 28/77 (36%), Positives = 50/77 (64%)
 Frame = -3

Query: 233 EPLSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNW 54
           E +  E +  H ++TFP+G   +PV+T+G E++EA+   WK  ++VK LG ++   V++ 
Sbjct: 51  EVVPHEFVKTHTKLTFPDGLNGEPVITVGREVMEAMNGLWKKCMVVKVLGRSLSIAVLSR 110

Query: 53  KIQEIWLPTGKIRLIDL 3
           K++E+W P G + + DL
Sbjct: 111 KLKEMWRPQGAMVVTDL 127


>ref|XP_006301940.1| hypothetical protein CARUB_v10022418mg, partial [Capsella rubella]
           gi|482570650|gb|EOA34838.1| hypothetical protein
           CARUB_v10022418mg, partial [Capsella rubella]
          Length = 493

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/77 (36%), Positives = 50/77 (64%)
 Frame = -3

Query: 233 EPLSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNW 54
           E +  E +  H ++TFP+G   +PV+T+G E++EA+   WK  ++VK LG ++   V++ 
Sbjct: 51  EVVPHEFVKTHTKLTFPDGLNGEPVITVGREVMEAMNGLWKKYMVVKVLGRSLSIAVLSR 110

Query: 53  KIQEIWLPTGKIRLIDL 3
           K++E+W P G + + DL
Sbjct: 111 KLKEMWRPQGAMVVTDL 127


>ref|XP_006282222.1| hypothetical protein CARUB_v10028495mg, partial [Capsella rubella]
           gi|482550926|gb|EOA15120.1| hypothetical protein
           CARUB_v10028495mg, partial [Capsella rubella]
          Length = 409

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 29/75 (38%), Positives = 46/75 (61%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           L DE     M + FP G   +PV+TIG E+LE +   +++ +IVK LG  +  D +N K+
Sbjct: 55  LEDEFAKTRMRVEFPNGAKGEPVITIGKEVLEVMYGLYRNCMIVKVLGRHITIDALNRKL 114

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P G + ++DL
Sbjct: 115 KEMWKPRGGMAVLDL 129


>ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, partial [Capsella rubella]
           gi|482555545|gb|EOA19737.1| hypothetical protein
           CARUB_v10003838mg, partial [Capsella rubella]
          Length = 391

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 27/75 (36%), Positives = 50/75 (66%)
 Frame = -3

Query: 227 LSDEMLTEHMEITFPEGEGCDPVVTIGSEILEALASTWKSSLIVKTLGTAVPYDVMNWKI 48
           ++ E +   + + FP G+  +PV+TIG+E++EA+   WK  +IVK LG  VP  V++ ++
Sbjct: 40  VTHEFVKPRLRLEFPNGKNGEPVITIGAEVIEAMHGLWKRCMIVKVLGRNVPVAVLSRRL 99

Query: 47  QEIWLPTGKIRLIDL 3
           +E+W P+  + ++DL
Sbjct: 100 KELWRPSRDMVVVDL 114