BLASTX nr result
ID: Rheum21_contig00037749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037749
(296 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADL36681.1| DOF domain class transcription factor [Malus dome... 64 2e-08
gb|EMJ11426.1| hypothetical protein PRUPE_ppa015648mg [Prunus pe... 61 2e-07
ref|XP_002511395.1| zinc finger protein, putative [Ricinus commu... 61 2e-07
gb|EXB87891.1| Dof zinc finger protein [Morus notabilis] 59 5e-07
ref|XP_006394333.1| hypothetical protein EUTSA_v10005662mg, part... 59 9e-07
ref|XP_004298945.1| PREDICTED: dof zinc finger protein DOF5.6-li... 58 2e-06
ref|XP_002321600.1| hypothetical protein POPTR_0015s08810g [Popu... 57 2e-06
ref|NP_201099.1| Dof zinc finger protein DOF5.6 [Arabidopsis tha... 56 4e-06
dbj|BAB10863.1| unnamed protein product [Arabidopsis thaliana] 56 4e-06
ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-li... 55 1e-05
ref|XP_002866523.1| hypothetical protein ARALYDRAFT_919576 [Arab... 55 1e-05
dbj|BAF00880.1| Dof zinc finger protein - like [Arabidopsis thal... 55 1e-05
>gb|ADL36681.1| DOF domain class transcription factor [Malus domestica]
Length = 327
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = -1
Query: 209 SSPFGFAMEGNSSGHALDNAYQRLMLPYDYHQVNSNDHGHQSGLIDVKPSTKLLSLEWQG 30
SSPFG + +G+ +D+ QRLMLPYD Q N DH HQ +DVKP+TKLLSLEWQ
Sbjct: 235 SSPFGMSSIDGQNGNFMDSC-QRLMLPYD--QANHEDH-HQINAMDVKPNTKLLSLEWQD 290
Query: 29 NTG 21
G
Sbjct: 291 QAG 293
>gb|EMJ11426.1| hypothetical protein PRUPE_ppa015648mg [Prunus persica]
Length = 327
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = -1
Query: 206 SPFGFAMEGNSSGHALDNAYQRLMLPYDYHQVNSNDHGHQSGLIDVKPSTKLLSLEWQ 33
SPFG + +G+ +D QRLMLPYD+ + DH HQ+G+ DVKP+TKLLSLEWQ
Sbjct: 236 SPFGMSSFDGQNGNFMDTC-QRLMLPYDHQASHDQDH-HQNGM-DVKPNTKLLSLEWQ 290
>ref|XP_002511395.1| zinc finger protein, putative [Ricinus communis]
gi|223550510|gb|EEF51997.1| zinc finger protein,
putative [Ricinus communis]
Length = 326
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/88 (46%), Positives = 52/88 (59%)
Frame = -1
Query: 296 RLDHHLSGHDYHIGLATPNNLFVNAISSSSSPFGFAMEGNSSGHALDNAYQRLMLPYDYH 117
+++HH H +H GLA PN SPFG +M+G S+G ++ QRLMLPYD H
Sbjct: 213 QINHHHHHHHHHQGLA-PN------YHGLCSPFGMSMDG-SNGTFMETC-QRLMLPYD-H 262
Query: 116 QVNSNDHGHQSGLIDVKPSTKLLSLEWQ 33
Q N + IDVKP+ KLLSLEWQ
Sbjct: 263 QGND-----EQNTIDVKPNAKLLSLEWQ 285
>gb|EXB87891.1| Dof zinc finger protein [Morus notabilis]
Length = 351
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -1
Query: 203 PFGFAMEGNSSGHALDNAYQRLMLPYDYHQVNSNDHGHQSGLIDVKPSTKLLSLEWQ 33
PFG +++GN+ + QRLMLPY+ +ND Q+G++DVKP+ KLLSL+WQ
Sbjct: 260 PFGMSLDGNNGNGTFMDTCQRLMLPYE-----ANDQDGQNGILDVKPNAKLLSLDWQ 311
>ref|XP_006394333.1| hypothetical protein EUTSA_v10005662mg, partial [Eutrema
salsugineum] gi|557090972|gb|ESQ31619.1| hypothetical
protein EUTSA_v10005662mg, partial [Eutrema salsugineum]
Length = 359
Score = 58.5 bits (140), Expect = 9e-07
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Frame = -1
Query: 290 DHHLSGHDYHIGLATPNNLFVNAISSSSSPFGFAMEGNSSGHALD-NAYQRLMLP-YDYH 117
DHH H+YH+ L L N + GN G +D + QRLMLP YD+
Sbjct: 218 DHH-HHHNYHMSLNHGVGLNNNNNNGGFHGISPGRNGNGGGALMDVSTCQRLMLPNYDHL 276
Query: 116 QVNSN---DHGHQSGLIDVKPSTKLLSLEWQ--------GNTGGGGENK 3
N N DH + ++DVKP+ KLLSL+WQ G +GGGG+++
Sbjct: 277 HYNHNHLEDHQRVTTIMDVKPNAKLLSLDWQHDQGYSDGGASGGGGKSE 325
>ref|XP_004298945.1| PREDICTED: dof zinc finger protein DOF5.6-like [Fragaria vesca
subsp. vesca]
Length = 342
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = -1
Query: 209 SSPFGFAM---EGNSSGHALDNAYQRLMLPYDYHQVNSNDHGHQSGLIDVKPSTKLLSLE 39
SSPFG +GN++G+ QRLMLPY+ N N HQ+ + DVKP+TKLLSLE
Sbjct: 246 SSPFGSMSLDHQGNNNGNNFMENCQRLMLPYE---ANENHQHHQNEIHDVKPNTKLLSLE 302
Query: 38 WQ 33
WQ
Sbjct: 303 WQ 304
>ref|XP_002321600.1| hypothetical protein POPTR_0015s08810g [Populus trichocarpa]
gi|222868596|gb|EEF05727.1| hypothetical protein
POPTR_0015s08810g [Populus trichocarpa]
Length = 314
Score = 57.4 bits (137), Expect = 2e-06
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = -1
Query: 281 LSGHDYHIGLATPNNLFVNAISSSSSPFGFAMEGNSSGHALDNAYQRLMLPYDYHQVNSN 102
L +H GLA PN S SPFG +++GNS QRLMLPYD N
Sbjct: 210 LGDMSHHHGLA-PN------YSGYCSPFGMSLDGNSGSFM--ETCQRLMLPYD----QGN 256
Query: 101 DHGHQSGLIDVKPSTKLLSLEWQ 33
DH IDVKP+TKLLSL+WQ
Sbjct: 257 DHDQNP--IDVKPNTKLLSLDWQ 277
>ref|NP_201099.1| Dof zinc finger protein DOF5.6 [Arabidopsis thaliana]
gi|55583984|sp|Q9FM03.2|DOF56_ARATH RecName: Full=Dof
zinc finger protein DOF5.6; Short=AtDOF5.6
gi|57222122|gb|AAW38968.1| At5g62940 [Arabidopsis
thaliana] gi|58531346|gb|AAW78595.1| At5g62940
[Arabidopsis thaliana] gi|332010293|gb|AED97676.1| Dof
zinc finger protein DOF5.6 [Arabidopsis thaliana]
Length = 372
Score = 56.2 bits (134), Expect = 4e-06
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
Frame = -1
Query: 290 DHHLSGHDYHIGLATPNNLFVNAISSSSSPFGFAMEGNSSGHALDN--AYQRLMLP-YDY 120
DHH H++H+GL + + +N +++ G + GN +G L + QRLML YD+
Sbjct: 234 DHH-HHHNHHMGLN--HGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLMLSNYDH 290
Query: 119 HQVN-SNDHGHQSGLIDVKPSTKLLSLEWQ--------GNTGGGGEN 6
H N DH + ++DVKP+ KLLSL+WQ G +GG G++
Sbjct: 291 HHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKS 337
>dbj|BAB10863.1| unnamed protein product [Arabidopsis thaliana]
Length = 348
Score = 56.2 bits (134), Expect = 4e-06
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
Frame = -1
Query: 290 DHHLSGHDYHIGLATPNNLFVNAISSSSSPFGFAMEGNSSGHALDN--AYQRLMLP-YDY 120
DHH H++H+GL + + +N +++ G + GN +G L + QRLML YD+
Sbjct: 210 DHH-HHHNHHMGLN--HGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLMLSNYDH 266
Query: 119 HQVN-SNDHGHQSGLIDVKPSTKLLSLEWQ--------GNTGGGGEN 6
H N DH + ++DVKP+ KLLSL+WQ G +GG G++
Sbjct: 267 HHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKS 313
>ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-like [Cucumis sativus]
gi|449487762|ref|XP_004157788.1| PREDICTED: dof zinc
finger protein DOF5.6-like [Cucumis sativus]
Length = 333
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Frame = -1
Query: 287 HHLSGHDYHI----GLATPNNLFVNAISSSS-------SPFGFAMEGNSSGHALDNAYQR 141
HH + + H+ GL + +++ A ++++ SP+G +++GN+ +
Sbjct: 213 HHYTTNTDHLAMVGGLTSDHHITAAAAAAAATNFHGICSPYGLSLDGNN--------INQ 264
Query: 140 LMLPYDYHQVNSNDHGHQSGLIDVKPSTKLLSLEWQGNTG 21
+M+PYD HQ N + +G +DVKP+TKLL+LEWQ G
Sbjct: 265 MMIPYDQHQQNEDPNG-----MDVKPNTKLLALEWQDQGG 299
>ref|XP_002866523.1| hypothetical protein ARALYDRAFT_919576 [Arabidopsis lyrata subsp.
lyrata] gi|297312358|gb|EFH42782.1| hypothetical protein
ARALYDRAFT_919576 [Arabidopsis lyrata subsp. lyrata]
Length = 375
Score = 55.1 bits (131), Expect = 1e-05
Identities = 42/100 (42%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Frame = -1
Query: 287 HHLSGH---DYHIGLATPNNLFVNAISSSSSPFGFAMEGNSSGHALDNAYQRLMLP-YDY 120
HH S H ++ +GL NN N + SP G GN G +A QRLML YD
Sbjct: 240 HHSSHHMGLNHGLGLNNNNN---NGGFNGISPGG---NGNGGGLMDISACQRLMLSNYDN 293
Query: 119 HQVN-SNDHGHQSGLIDVKPSTKLLSLEW---QGNTGGGG 12
H N DH + ++DVKP+ KLLSL+W QG + GGG
Sbjct: 294 HHYNHQEDHQRVATIMDVKPNAKLLSLDWQQDQGYSNGGG 333
>dbj|BAF00880.1| Dof zinc finger protein - like [Arabidopsis thaliana]
Length = 372
Score = 55.1 bits (131), Expect = 1e-05
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
Frame = -1
Query: 290 DHHLSGHDYHIGLATPNNLFVNAISSSSSPFGFAMEGNSSGHALDN--AYQRLMLP-YDY 120
DHH H++H+GL + + +N +++ G + GN +G L + QRLML YD+
Sbjct: 234 DHH-HHHNHHMGLN--HGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLMLSNYDH 290
Query: 119 HQVN-SNDHGHQSGLIDVKPSTKLLSLEWQ--------GNTGGGGEN 6
H N DH + ++DV+P+ KLLSL+WQ G +GG G++
Sbjct: 291 HHYNHQEDHQRVATIMDVRPNPKLLSLDWQQDQCYSNGGGSGGAGKS 337