BLASTX nr result
ID: Rheum21_contig00037739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037739
(259 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623... 76 5e-12
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 74 3e-11
emb|CAH65991.1| H1005F08.20 [Oryza sativa Indica Group] 71 2e-10
gb|ABF96602.1| retrotransposon protein, putative, Ty3-gypsy subc... 71 2e-10
gb|AAS07058.1| retrotransposon protein, putative, Ty3-gypsy sub-... 71 2e-10
gb|AAS07078.1| putative polyprotein [Oryza sativa Japonica Group] 71 2e-10
gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subc... 70 2e-10
gb|ABA93980.1| retrotransposon protein, putative, Ty3-gypsy subc... 70 2e-10
gb|AAX95114.1| retrotransposon protein, putative, unclassified [... 70 2e-10
gb|AAL91598.1|AC099400_4 Putative gag-pol precursor [Oryza sativ... 70 2e-10
gb|AAP51762.2| retrotransposon protein, putative, Ty3-gypsy subc... 70 2e-10
emb|CAE03595.1| OSJNBa0087O24.18 [Oryza sativa Japonica Group] 70 2e-10
gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Ja... 70 2e-10
ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610... 70 3e-10
emb|CAH66330.1| H0813E03.7 [Oryza sativa Indica Group] 70 3e-10
gb|ABA97326.2| transposon protein, putative, unclassified [Oryza... 70 3e-10
emb|CAH67728.1| H0613A10.11 [Oryza sativa Indica Group] gi|90265... 70 3e-10
emb|CAD40484.2| OSJNBa0067G20.2 [Oryza sativa Japonica Group] gi... 70 3e-10
emb|CAE02993.2| OSJNBa0043L09.12 [Oryza sativa Japonica Group] 70 3e-10
gb|AAP20843.1| retrotransposon protein, putative, Ty3-gypsy sub-... 70 3e-10
>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
Length = 1407
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = -3
Query: 251 DLKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESR 72
+LK+YLQ+ P+L+ P G+ L VREE+ Q PIYY SK LL AE+R
Sbjct: 1149 NLKQYLQQAPLLSTPRDGDKLNLYLAVSDRAASSVLVREEEGVQYPIYYTSKALLDAETR 1208
Query: 71 YPPLERLLLALMVTARKLNHYF 6
YPPLE+ LAL+V ARKL YF
Sbjct: 1209 YPPLEKWALALVVAARKLRPYF 1230
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/81 (45%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LK YL P+L+ P G+ L+ VREE+ KQ P+YY SK L+ AE+RY
Sbjct: 1137 LKEYLARAPLLSTPREGDQLLLYLAISKRATSSVLVREEEGKQHPVYYTSKALVDAETRY 1196
Query: 68 PPLERLLLALMVTARKLNHYF 6
PP+E+ LAL+ ARKL YF
Sbjct: 1197 PPMEKWALALITAARKLRPYF 1217
>emb|CAH65991.1| H1005F08.20 [Oryza sativa Indica Group]
Length = 1571
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 960 LKRYLSNPPVLVAPQPNEELFLYIAAMPYSVSTVIVVEREKVQRPVYYVSEALHDAKTRY 1019
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL+HYF
Sbjct: 1020 PQIQKLLYAIIMTSRKLHHYF 1040
>gb|ABF96602.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1727
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYV++TL A++RY
Sbjct: 1105 LKRYLSNPPVLVAPQPNEELFLYIAATPHSVSTVIVIEREKVQRPVYYVNETLHDAKTRY 1164
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 1165 PQIQKLLYAVIMTSRKLRHYF 1185
>gb|AAS07058.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 706
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYV++TL A++RY
Sbjct: 84 LKRYLSNPPVLVAPQPNEELFLYIAATPHSVSTVIVIEREKVQRPVYYVNETLHDAKTRY 143
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 144 PQIQKLLYAVIMTSRKLRHYF 164
>gb|AAS07078.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1724
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYV++TL A++RY
Sbjct: 1102 LKRYLSNPPVLVAPQPNEELFLYIAATPHSVSTVIVIEREKVQRPVYYVNETLHDAKTRY 1161
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 1162 PQIQKLLYAVIMTSRKLRHYF 1182
>gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1783
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 1303 LKRYLSNPPVLVAPQPNEELFLYIAATPHSVSIVIVVEREKVQRPVYYVSEALHDAKTRY 1362
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 1363 PQIQKLLYAIIMTSRKLRHYF 1383
>gb|ABA93980.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1567
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PPIL P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 893 LKRYLSNPPILVAPQPNEELFLYIAAIPYSVSTVIVVEREKVQRPVYYVSEALHDAKTRY 952
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 953 PQIQKLLYAVIMTSRKLRHYF 973
>gb|AAX95114.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77548885|gb|ABA91682.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 330
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 90 LKRYLSNPPVLVAPQPNEELFLYIAATSYSVSTVIVVEREKVQRPVYYVSEALHDAKTRY 149
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL+HYF
Sbjct: 150 PQIQKLLYAVIMTSRKLHHYF 170
>gb|AAL91598.1|AC099400_4 Putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 791
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PPIL P E L+ V E ++ Q P+YYVS+ L A++RY
Sbjct: 260 LKRYLSNPPILVAPQPNEELLLYIAAMPYSVSTIIVVEREKVQQPVYYVSEALHDAKTRY 319
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T++KL HYF
Sbjct: 320 PQIQKLLYAVIMTSKKLRHYF 340
>gb|AAP51762.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 911
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PPIL P E L+ V E ++ Q P+YYVS+ L A++RY
Sbjct: 260 LKRYLSNPPILVAPQPNEELLLYIAAMPYSVSTIIVVEREKVQQPVYYVSEALHDAKTRY 319
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T++KL HYF
Sbjct: 320 PQIQKLLYAVIMTSKKLRHYF 340
>emb|CAE03595.1| OSJNBa0087O24.18 [Oryza sativa Japonica Group]
Length = 1512
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 877 LKRYLSNPPVLVAPQRNEELFLYIAAMPYSVSTVIVVEREKVQRPVYYVSEALHDAKTRY 936
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL+HYF
Sbjct: 937 PQIQKLLYAVIMTSRKLHHYF 957
>gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 2079
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 1368 LKRYLSNPPVLVAPQPNEELFLYIAATPHSVSIVIVVEREKVQRPVYYVSEALHDAKTRY 1427
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 1428 PQIQKLLYAIIMTSRKLRHYF 1448
>ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610907 [Citrus sinensis]
Length = 1231
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/82 (47%), Positives = 49/82 (59%)
Frame = -3
Query: 251 DLKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESR 72
+LK+YLQ+ P+L+ G+ L VREE+ Q PI Y SK LL E+R
Sbjct: 475 NLKQYLQQAPLLSTLRDGDKLFLYLAVSNRAASSVLVREEEGVQYPISYTSKALLDVETR 534
Query: 71 YPPLERLLLALMVTARKLNHYF 6
YPPLE+ LALMV+ARKL YF
Sbjct: 535 YPPLEKWALALMVSARKLRPYF 556
>emb|CAH66330.1| H0813E03.7 [Oryza sativa Indica Group]
Length = 940
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 337 LKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTIIVVEREKVQRPVYYVSEALHDAKTRY 396
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 397 PQIQKLLYAVIMTSRKLRHYF 417
>gb|ABA97326.2| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 916
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 201 LKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTVIVVEREKVQRPVYYVSEALHDAKTRY 260
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 261 PQIQKLLYAVIMTSRKLRHYF 281
>emb|CAH67728.1| H0613A10.11 [Oryza sativa Indica Group] gi|90265218|emb|CAH67666.1|
H0315F07.4 [Oryza sativa Indica Group]
Length = 1215
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L + E ++ Q P+YYVS+ L A++RY
Sbjct: 716 LKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTVIIVEREKVQRPVYYVSEALHDAKTRY 775
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 776 PQIQKLLYAVIMTSRKLRHYF 796
>emb|CAD40484.2| OSJNBa0067G20.2 [Oryza sativa Japonica Group]
gi|38345361|emb|CAE03319.2| OSJNBa0032I19.13 [Oryza
sativa Japonica Group]
Length = 940
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 337 LKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTIIVVEREKVQRPVYYVSEALHDAKTRY 396
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 397 PQIQKLLYAVIMTSRKLRHYF 417
>emb|CAE02993.2| OSJNBa0043L09.12 [Oryza sativa Japonica Group]
Length = 1120
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L + E ++ Q P+YYVS+ L A++RY
Sbjct: 602 LKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTVIIVEREKVQRPVYYVSEALHDAKTRY 661
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 662 PQIQKLLYAVIMTSRKLRHYF 682
>gb|AAP20843.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108708895|gb|ABF96690.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1547
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = -3
Query: 248 LKRYLQEPPILTVPSAGEALIXXXXXXXXXXXXXXVREEKRKQSPIYYVSKTLLGAESRY 69
LKRYL PP+L P E L V E ++ Q P+YYVS+ L A++RY
Sbjct: 978 LKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTVIVVEREKVQRPVYYVSEALHDAKTRY 1037
Query: 68 PPLERLLLALMVTARKLNHYF 6
P +++LL A+++T+RKL HYF
Sbjct: 1038 PQIQKLLYAVIMTSRKLRHYF 1058