BLASTX nr result

ID: Rheum21_contig00037703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00037703
         (357 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB51896.1| hypothetical protein L484_006241 [Morus notabilis]      59   5e-07
ref|XP_006376993.1| hypothetical protein POPTR_0012s11890g [Popu...    56   4e-06
ref|XP_002332130.1| predicted protein [Populus trichocarpa]            56   4e-06
ref|XP_002336351.1| predicted protein [Populus trichocarpa]            56   4e-06
gb|EOY27493.1| Mitochondrial transcription termination factor fa...    56   6e-06

>gb|EXB51896.1| hypothetical protein L484_006241 [Morus notabilis]
          Length = 564

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -1

Query: 357 LGTILACSESRFMKYFVEVHPEGRGFWETLKQSAAS 250
           L T+LACS+SRF+KYFV+VHPEG   WETLK S+ S
Sbjct: 528 LSTLLACSDSRFLKYFVDVHPEGPAMWETLKSSSVS 563


>ref|XP_006376993.1| hypothetical protein POPTR_0012s11890g [Populus trichocarpa]
           gi|550326928|gb|ERP54790.1| hypothetical protein
           POPTR_0012s11890g [Populus trichocarpa]
          Length = 523

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -1

Query: 357 LGTILACSESRFMKYFVEVHPEGRGFWETLKQSAAS 250
           L TILACS++RF+KYFV+VHPEG   WE+L+ ++AS
Sbjct: 487 LSTILACSDARFIKYFVDVHPEGPAMWESLRNTSAS 522


>ref|XP_002332130.1| predicted protein [Populus trichocarpa]
          Length = 577

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -1

Query: 357 LGTILACSESRFMKYFVEVHPEGRGFWETLKQSAAS 250
           L TILACS++RF+KYFV+VHPEG   WE+L+ ++AS
Sbjct: 541 LSTILACSDARFIKYFVDVHPEGPAMWESLRNTSAS 576


>ref|XP_002336351.1| predicted protein [Populus trichocarpa]
          Length = 139

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -1

Query: 357 LGTILACSESRFMKYFVEVHPEGRGFWETLKQSAAS 250
           L TILACS++RF+KYFV+VHPEG   WE+L+ ++AS
Sbjct: 103 LSTILACSDARFIKYFVDVHPEGPAMWESLRNTSAS 138


>gb|EOY27493.1| Mitochondrial transcription termination factor family protein,
           putative [Theobroma cacao]
          Length = 593

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = -1

Query: 357 LGTILACSESRFMKYFVEVHPEGRGFWETLKQSAAS 250
           L T+LACS++RF+KYFV+VHPEG   WETLK+S  S
Sbjct: 557 LSTVLACSDARFVKYFVDVHPEGPAKWETLKKSLHS 592


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