BLASTX nr result
ID: Rheum21_contig00037676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037676
(293 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26320.3| unnamed protein product [Vitis vinifera] 149 4e-34
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi... 149 4e-34
gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [The... 134 2e-29
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
gb|ESW15100.1| hypothetical protein PHAVU_007G044100g [Phaseolus... 129 5e-28
ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 126 3e-27
ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Caps... 125 5e-27
ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutr... 123 3e-26
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ... 123 3e-26
ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-26
ref|NP_199192.1| pentatricopeptide repeat-containing protein [Ar... 122 5e-26
ref|XP_002863633.1| pentatricopeptide repeat-containing protein ... 119 4e-25
gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea] 112 7e-23
gb|EMT21685.1| hypothetical protein F775_00874 [Aegilops tauschii] 111 9e-23
gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sat... 111 1e-22
gb|EEC67595.1| hypothetical protein OsI_34962 [Oryza sativa Indi... 111 1e-22
gb|EAZ17300.1| hypothetical protein OsJ_32820 [Oryza sativa Japo... 111 1e-22
gb|EMS58725.1| hypothetical protein TRIUR3_04390 [Triticum urartu] 108 1e-21
gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indi... 107 2e-21
>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 149 bits (376), Expect = 4e-34
Identities = 68/96 (70%), Positives = 80/96 (83%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y LK+ L LN FV TALIDMY+KCGCL LA QLFD+ PHRDTLCYNAMI G A+HGYGH
Sbjct: 175 YVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQ 234
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL+LF +M +EGL+PD+VTL+VTMC+C GLV+EG
Sbjct: 235 ALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEG 270
>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 149 bits (376), Expect = 4e-34
Identities = 68/96 (70%), Positives = 80/96 (83%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y LK+ L LN FV TALIDMY+KCGCL LA QLFD+ PHRDTLCYNAMI G A+HGYGH
Sbjct: 243 YVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQ 302
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL+LF +M +EGL+PD+VTL+VTMC+C GLV+EG
Sbjct: 303 ALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEG 338
>gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 601
Score = 134 bits (336), Expect = 2e-29
Identities = 61/96 (63%), Positives = 73/96 (76%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y LK + +N +V TALIDMY+KCGCL LA QLFD+ P RD LCYNAMI G +HGYG
Sbjct: 254 YVLKYSIKVNYYVGTALIDMYSKCGCLGLAYQLFDQLPERDVLCYNAMIGGFGIHGYGQR 313
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
ALEL+++MK +GL PD+VT IV MCAC GLV+EG
Sbjct: 314 ALELYEKMKFQGLVPDDVTFIVIMCACSHVGLVEEG 349
>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 130 bits (328), Expect = 1e-28
Identities = 63/96 (65%), Positives = 73/96 (76%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y L+N L LNRFV TAL+DMY+KCGCL LA QLFDE RDT CYNAMI G AVHG+G+
Sbjct: 244 YVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQ 303
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
ALEL+ MK+E L PD T++VTM AC GLV+EG
Sbjct: 304 ALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEG 339
>gb|ESW15100.1| hypothetical protein PHAVU_007G044100g [Phaseolus vulgaris]
Length = 510
Score = 129 bits (323), Expect = 5e-28
Identities = 61/96 (63%), Positives = 73/96 (76%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y L+N L LNRFV TAL+DMY+KCGCL LA QLFD+ RDT CY AMI G AVHG+G
Sbjct: 163 YVLRNNLELNRFVGTALVDMYSKCGCLNLACQLFDQLSERDTFCYTAMIGGFAVHGHGGQ 222
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
ALEL+ +MK+EGL P + T++VTM AC GLV+EG
Sbjct: 223 ALELYRKMKLEGLVPGDATIVVTMFACSHGGLVEEG 258
>ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g43790-like, partial [Cicer arietinum]
Length = 632
Score = 126 bits (317), Expect = 3e-27
Identities = 60/98 (61%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFP--HRDTLCYNAMIRGMAVHGYG 178
+ L+NKL +NRFV TAL+DMY+KCGCL LA QLFDE P ++DT CYNAMI G A+HGYG
Sbjct: 283 FVLRNKLKMNRFVGTALVDMYSKCGCLNLACQLFDEMPESNKDTFCYNAMIGGFALHGYG 342
Query: 179 HHALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
+ ALEL+ +MK +G PD T +VTM AC GLV++G
Sbjct: 343 NQALELYRKMKFKGFVPDAATFVVTMFACSHVGLVEKG 380
>ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Capsella rubella]
gi|482549137|gb|EOA13331.1| hypothetical protein
CARUB_v10026365mg [Capsella rubella]
Length = 461
Score = 125 bits (315), Expect = 5e-27
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y KN L LN+FV T+LID+Y+KCGCL+ ARQ+FDE RD CYNAMIRG+AVHG+G
Sbjct: 242 YLYKNNLTLNQFVGTSLIDLYSKCGCLSFARQVFDEMSQRDVSCYNAMIRGLAVHGFGQE 301
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
A+E ++R+ +GL PD+ T +VT+ AC +GLV EG
Sbjct: 302 AIEFYNRLVSQGLVPDDATFVVTISACSHSGLVDEG 337
>ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Solanum lycopersicum]
Length = 602
Score = 125 bits (313), Expect = 8e-27
Identities = 60/97 (61%), Positives = 73/97 (75%)
Frame = +2
Query: 2 AYALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGH 181
+Y L+N L LNRFV TALI +Y+ CG L ARQ+FD+ RDT CYNAMIRG+AVHG G
Sbjct: 254 SYVLRNDLKLNRFVGTALIAVYSNCGRLDFARQVFDQLLERDTYCYNAMIRGLAVHGLGV 313
Query: 182 HALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
ALELF +M +EGL PD+VT++V MCAC GLV +G
Sbjct: 314 EALELFKKMDLEGLVPDDVTMLVIMCACSNVGLVDQG 350
>ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutrema salsugineum]
gi|557104300|gb|ESQ44640.1| hypothetical protein
EUTSA_v10003201mg [Eutrema salsugineum]
Length = 467
Score = 123 bits (308), Expect = 3e-26
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y LKN L LN+FV T+LID Y+KCGCL+ ARQ+FDE RD CYNAMIRG+AVHG+G
Sbjct: 249 YLLKNNLTLNQFVGTSLIDFYSKCGCLSFARQMFDEMRDRDASCYNAMIRGLAVHGFGKE 308
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
A++L+ + +GL PDE T +VT+ AC +GLV++G
Sbjct: 309 AIKLYRSLISQGLIPDEATFVVTISACSHSGLVEDG 344
>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 740
Score = 123 bits (308), Expect = 3e-26
Identities = 58/98 (59%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPH--RDTLCYNAMIRGMAVHGYG 178
+ L+NK+ +NRFV TA +DMY+KCGCL LA Q+FD+ P RD+ CY AMI G AVHGYG
Sbjct: 391 FVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYG 450
Query: 179 HHALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
+ ALEL+ +MK +GL PD T +VTM AC GLV+EG
Sbjct: 451 NQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEG 488
>ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Solanum tuberosum]
Length = 602
Score = 122 bits (307), Expect = 4e-26
Identities = 59/97 (60%), Positives = 72/97 (74%)
Frame = +2
Query: 2 AYALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGH 181
+Y L+N L LNR+V ALI +YA CG L ARQ+FD+ RDT CYNAMIRG+AVHG G
Sbjct: 254 SYVLRNGLKLNRYVGAALIAVYANCGRLDFARQVFDQLLERDTYCYNAMIRGLAVHGLGL 313
Query: 182 HALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
ALELF +M +EGL PD+VT++V MCAC GLV +G
Sbjct: 314 EALELFKKMDLEGLVPDDVTMLVIMCACSNVGLVDQG 350
>ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g43790 gi|10177948|dbj|BAB11307.1| unnamed protein
product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 122 bits (306), Expect = 5e-26
Identities = 55/96 (57%), Positives = 71/96 (73%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y LKN L LN+FV T+LID+Y+KCGCL+ AR++FDE RD CYNAMIRG+AVHG+G
Sbjct: 241 YVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQE 300
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
+EL+ + +GL PD T +VT+ AC +GLV EG
Sbjct: 301 GIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
>ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309468|gb|EFH39892.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 460
Score = 119 bits (298), Expect = 4e-25
Identities = 54/96 (56%), Positives = 70/96 (72%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
Y LK L LN+FV T+LID Y+KCGCL+ ARQ+FDE RD C+NAMIRG+AVHG+G
Sbjct: 241 YLLKKNLTLNQFVGTSLIDFYSKCGCLSFARQVFDEMSERDISCFNAMIRGLAVHGFGQE 300
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
+EL++ + +GL PD T +VT+ AC +GLV EG
Sbjct: 301 GIELYNSLISQGLVPDNATFVVTISACSHSGLVDEG 336
>gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea]
Length = 478
Score = 112 bits (279), Expect = 7e-23
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Frame = +2
Query: 2 AYALK--NKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGY 175
AYAL+ N L +N F+ TALI +Y+ CG L LA QLF P +DT C+NAMIRG A+HGY
Sbjct: 260 AYALRDTNNLRINHFMGTALITLYSNCGSLHLASQLFSTLPLKDTFCFNAMIRGYAIHGY 319
Query: 176 GHHALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
GH AL+LF+ MK EG +PD+ T++ + AC GLV +G
Sbjct: 320 GHDALDLFETMKREGFAPDDFTMLGVISACSHVGLVDQG 358
>gb|EMT21685.1| hypothetical protein F775_00874 [Aegilops tauschii]
Length = 432
Score = 111 bits (278), Expect = 9e-23
Identities = 53/97 (54%), Positives = 67/97 (69%)
Frame = +2
Query: 2 AYALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGH 181
AYALK +L +N +V TAL++MY +CG + LA Q+F DT CYNAM++G+A HG+G
Sbjct: 34 AYALKRRLTVNCYVATALVEMYTRCGKMDLAEQVFAGVTDMDTCCYNAMLQGLAFHGHGR 93
Query: 182 HALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL LFDRM EG D VT++ MCAC AGLV EG
Sbjct: 94 VALTLFDRMCAEGFPVDSVTVLAVMCACAHAGLVDEG 130
>gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 624
Score = 111 bits (277), Expect = 1e-22
Identities = 55/96 (57%), Positives = 67/96 (69%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
YA+K +L +N V TAL++MYA CG L LA Q+F RDT CYNAM+ G+AVHG+G
Sbjct: 277 YAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRA 336
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL LFDRM EG+ D VT++ MCAC AGLV EG
Sbjct: 337 ALSLFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEG 372
>gb|EEC67595.1| hypothetical protein OsI_34962 [Oryza sativa Indica Group]
Length = 838
Score = 111 bits (277), Expect = 1e-22
Identities = 55/96 (57%), Positives = 67/96 (69%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
YA+K +L +N V TAL++MYA CG L LA Q+F RDT CYNAM+ G+AVHG+G
Sbjct: 491 YAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRA 550
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL LFDRM EG+ D VT++ MCAC AGLV EG
Sbjct: 551 ALSLFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEG 586
>gb|EAZ17300.1| hypothetical protein OsJ_32820 [Oryza sativa Japonica Group]
Length = 816
Score = 111 bits (277), Expect = 1e-22
Identities = 55/96 (57%), Positives = 67/96 (69%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
YA+K +L +N V TAL++MYA CG L LA Q+F RDT CYNAM+ G+AVHG+G
Sbjct: 613 YAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRA 672
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL LFDRM EG+ D VT++ MCAC AGLV EG
Sbjct: 673 ALSLFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEG 708
>gb|EMS58725.1| hypothetical protein TRIUR3_04390 [Triticum urartu]
Length = 618
Score = 108 bits (269), Expect = 1e-21
Identities = 51/97 (52%), Positives = 67/97 (69%)
Frame = +2
Query: 2 AYALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGH 181
AYAL+++L +N ++ TAL++MY +CG + LA Q+F DT CYNAM++G+A HG G
Sbjct: 270 AYALRHRLTVNCYLATALVEMYTRCGEMDLAEQVFAGVTDMDTRCYNAMLQGLAFHGRGR 329
Query: 182 HALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL LFDRM EG D VT++ MCAC AGLV EG
Sbjct: 330 AALTLFDRMCAEGFPVDSVTMLAVMCACAHAGLVDEG 366
>gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indica Group]
Length = 960
Score = 107 bits (266), Expect = 2e-21
Identities = 53/96 (55%), Positives = 65/96 (67%)
Frame = +2
Query: 5 YALKNKLVLNRFVITALIDMYAKCGCLALARQLFDEFPHRDTLCYNAMIRGMAVHGYGHH 184
YA+K +L +N V TAL++MYA CG L LA Q+F RDT CYNAM+ G+AVHG+G
Sbjct: 613 YAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAVSDRDTRCYNAMLHGLAVHGHGRA 672
Query: 185 ALELFDRMKIEGLSPDEVTLIVTMCACIKAGLVKEG 292
AL L DRM G+ D VT++ MCAC AGLV EG
Sbjct: 673 ALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEG 708