BLASTX nr result
ID: Rheum21_contig00037656
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037656
(263 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 94 2e-17
ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777... 91 1e-16
emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group] 90 4e-16
gb|EMT30033.1| hypothetical protein F775_17829 [Aegilops tauschii] 89 5e-16
gb|ABB47203.2| retrotransposon protein, putative, unclassified [... 87 3e-15
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 87 3e-15
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group] 87 3e-15
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana] 86 5e-15
gb|ABA94365.1| retrotransposon protein, putative, unclassified [... 86 5e-15
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 86 5e-15
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum] 85 9e-15
gb|ADB85383.1| putative retrotransposon protein [Phyllostachys e... 85 1e-14
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773... 84 2e-14
ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766... 84 2e-14
gb|ABA98073.1| retrotransposon protein, putative, unclassified [... 84 2e-14
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group] 84 2e-14
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ... 83 3e-14
gb|AAT38052.1| unknown protein [Oryza sativa Japonica Group] gi|... 83 4e-14
ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777... 82 1e-13
gb|ABA95677.1| retrotransposon protein, putative, Ty1-copia subc... 82 1e-13
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TRG +G+ KP NL +ST+ P+P +Y++AL +P W +M+EE+ AL N TWDLVP
Sbjct: 1057 MTTRGKAGVRKPVQRLNLHASTLSPVPRTYRAALADPYWRTAMEEEFTALTANRTWDLVP 1116
Query: 213 RPRDANVVTGKWLFRHQ 263
RP ANVVTGKW+F+H+
Sbjct: 1117 RPSGANVVTGKWIFKHK 1133
>ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777694 [Setaria italica]
Length = 1416
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVPR 215
M TRG G +P T+F+ SSS P+P SY+ AL +P W +M EE+DAL+ N TWDLVPR
Sbjct: 877 MTTRGKMGFWQP-TLFH-SSSLSPVPRSYRGALADPNWRQAMHEEFDALLSNNTWDLVPR 934
Query: 216 PRDANVVTGKWLFRHQ 263
P +N+VTGKW+F+H+
Sbjct: 935 PSGSNIVTGKWIFKHK 950
>emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group]
Length = 322
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/77 (53%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TRG G+ +P +NLS++T+ P+P +Y+ AL +P W ++M+EE+ AL N TWDLVP
Sbjct: 1 MTTRGKHGLHQPVKRYNLSATTLSPVPRTYRPALADPNWRSAMEEEFTALQANRTWDLVP 60
Query: 213 RPRDANVVTGKWLFRHQ 263
RP ANVVTGKW+FR++
Sbjct: 61 RPNGANVVTGKWIFRYK 77
>gb|EMT30033.1| hypothetical protein F775_17829 [Aegilops tauschii]
Length = 764
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TR GI +PK IF+L + PIP +Y+ AL++P W ++M EEY AL+ N TWDLV
Sbjct: 1 MATRAKQGIVQPKKIFDLHVEGLSPIPKTYRGALKDPNWHSAMVEEYGALLSNNTWDLVD 60
Query: 213 RPRDANVVTGKWLFRHQ 263
P +AN+VTGKW++RH+
Sbjct: 61 PPHNANIVTGKWIYRHK 77
>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1050
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFN---LSSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDL 206
M+TR +G P FN + +S P+P++Y+SAL +P W +M +EY AL+ N TW L
Sbjct: 608 MVTRSQTGNLHPAQRFNYTAMQTSVSPVPSNYRSALADPNWHAAMADEYKALVDNNTWHL 667
Query: 207 VPRPRDANVVTGKWLFRHQ 263
VP+P ANVVTGKW+FRH+
Sbjct: 668 VPQPPGANVVTGKWIFRHK 686
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFN---LSSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDL 206
M+TR +G P FN + +S P+P++Y+SAL +P W +M +EY AL+ N TW L
Sbjct: 808 MVTRSQTGNLHPAQRFNYTAMQTSVSPVPSNYRSALADPNWHAAMADEYKALVDNNTWHL 867
Query: 207 VPRPRDANVVTGKWLFRHQ 263
VP+P ANVVTGKW+FRH+
Sbjct: 868 VPQPPGANVVTGKWIFRHK 886
>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1146
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFN---LSSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDL 206
M+TR +G P FN + +S P+P++Y+SAL +P W +M +EY AL+ N TW L
Sbjct: 704 MVTRSQTGNLHPAQRFNYTAMQTSVSPVPSNYRSALADPNWHAAMADEYKALVDNNTWHL 763
Query: 207 VPRPRDANVVTGKWLFRHQ 263
VP+P ANVVTGKW+FRH+
Sbjct: 764 VPQPPGANVVTGKWIFRHK 782
>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
Length = 820
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 30 RQMITRGMSGITKPKTIFNLSSSTVP-IPTSYKSALQNPLWFNSMKEEYDALIKNGTWDL 206
++M+TR GI KPK I +L++ T+ IP YK AL +P W SM EEYDALIK TW L
Sbjct: 614 QRMVTRSQQGIRKPKKILSLNAQTLSQIPKGYKQALMDPNWNPSMTEEYDALIKTYTWSL 673
Query: 207 VPRPRDANVVTGKWLFRHQ 263
VP+P N++ WL++H+
Sbjct: 674 VPKPAGTNIINSIWLYKHK 692
>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1064
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFN---LSSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDL 206
M+TR +G +P FN + +S P+P++Y+SAL +P W +M +EY AL+ N TW L
Sbjct: 570 MVTRSQTGNLRPVHRFNYTAMQTSVSPVPSNYRSALADPNWRAAMADEYKALVDNNTWRL 629
Query: 207 VPRPRDANVVTGKWLFRHQ 263
VPRP ANVV+GKW+FRH+
Sbjct: 630 VPRPPGANVVSGKWIFRHK 648
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTVP-IPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TR SG KP NL ++ + +P +Y++AL +PLW +M+EEY+AL+ N TWDLVP
Sbjct: 1149 MTTRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTWDLVP 1208
Query: 213 RPRDANVVTGKWLFRHQ 263
RP NVVTGKW+F+H+
Sbjct: 1209 RPAGVNVVTGKWIFKHK 1225
>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
Length = 534
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TRG SGI +P NL V P+P S + AL +P W ++M+ E+DALI N TW LVP
Sbjct: 1 MRTRGKSGIAQPVDRLNLHVVPVSPLPRSVRDALSDPNWRSAMQAEFDALIGNDTWSLVP 60
Query: 213 RPRDANVVTGKWLFRHQ 263
RP NVVTGKW+FRH+
Sbjct: 61 RPPGVNVVTGKWIFRHK 77
>gb|ADB85383.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 862
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M+TRG + P IFNL ++ + P+P SY+ AL +P W +M EE+ AL N TWDL+P
Sbjct: 324 MVTRGKASYQHPVKIFNLHAALISPLPKSYRGALADPNWRAAMDEEFSALKANNTWDLIP 383
Query: 213 RPRDANVVTGKWLFRHQ 263
P AN+VT KW+FRH+
Sbjct: 384 CPSSANIVTSKWVFRHK 400
>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
Length = 1950
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Frame = +3
Query: 39 ITRGMSGITKPKTIFNL----SSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDL 206
+TR M+G + L SSS PIPT+Y+SAL + W +M +EY AL+ N TW L
Sbjct: 1406 VTRTMTGAIPRVSYEGLAATTSSSPSPIPTNYRSALADANWRAAMMDEYQALVDNNTWQL 1465
Query: 207 VPRPRDANVVTGKWLFRHQ 263
VPRP DANVVTGKW+FRH+
Sbjct: 1466 VPRPPDANVVTGKWIFRHK 1484
>ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766505 [Setaria italica]
Length = 943
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTVP-IPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TRG SG +P NL ++T+ +P S++SAL +P W +M+ E+DAL+ N TW LVP
Sbjct: 499 MRTRGKSGFRQPVDRLNLHTTTLSAVPKSFRSALADPHWRAAMQAEFDALLANDTWTLVP 558
Query: 213 RPRDANVVTGKWLFRHQ 263
RP N++TGKW+FRH+
Sbjct: 559 RPSGVNIITGKWIFRHK 575
>gb|ABA98073.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 724
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/77 (50%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M R +G+ K T NL ++ + PIP +Y++AL +P W ++M+EEY+AL+ N TWDLVP
Sbjct: 200 MTIRAKAGVRKELTRMNLHATPLSPIPKTYRAALADPNWRSAMEEEYNALLANRTWDLVP 259
Query: 213 RPRDANVVTGKWLFRHQ 263
P ANVVTGKW+F+H+
Sbjct: 260 CPVKANVVTGKWIFKHK 276
>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
Length = 811
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTVP-IPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TR SG KP NL ++ + +P +Y++AL +PLW +M+EEY+AL+ N TWDLVP
Sbjct: 281 MTTRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTWDLVP 340
Query: 213 RPRDANVVTGKWLFRHQ 263
RP NVV GKW+F+H+
Sbjct: 341 RPASVNVVAGKWIFKHK 357
>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
gi|241947225|gb|EES20370.1| hypothetical protein
SORBIDRAFT_0019s003280 [Sorghum bicolor]
Length = 761
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVPR 215
M TRG +G +P+ + + + PIP S + AL +P W +M+EEY AL+ N TWDLVPR
Sbjct: 223 MTTRGKAGFQQPRLGLHAEAIS-PIPRSCRDALTDPHWRQAMEEEYAALMDNHTWDLVPR 281
Query: 216 PRDANVVTGKWLFRHQ 263
P ANVVTGKW+F+H+
Sbjct: 282 PNAANVVTGKWIFKHK 297
>gb|AAT38052.1| unknown protein [Oryza sativa Japonica Group]
gi|215741379|dbj|BAG97874.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 224
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Frame = +3
Query: 36 MITRGMSGITKP--KTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDL 206
M+TR +G KP + + ++S + + P+ +Y+SAL +P W +M EE+ ALI NGTW L
Sbjct: 71 MVTRSKTGSLKPVDRLVLSVSHNAISPLSANYRSALADPNWRAAMAEEFKALIDNGTWRL 130
Query: 207 VPRPRDANVVTGKWLFRHQ 263
VPRP ANVVTGKW+F+H+
Sbjct: 131 VPRPPGANVVTGKWIFKHK 149
>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
Length = 1188
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTV-PIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVP 212
M TRG SG +P NLS++ + P+P S + AL +P W +M+ E+DAL N TW LVP
Sbjct: 622 MRTRGKSGFVQPVDRLNLSAAALSPLPQSVRFALVDPNWRAAMQSEFDALKANDTWSLVP 681
Query: 213 RPRDANVVTGKWLFRHQ 263
RP N+VTGKW+FRH+
Sbjct: 682 RPPGVNIVTGKWVFRHK 698
>gb|ABA95677.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 389
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +3
Query: 36 MITRGMSGITKPKTIFNLSSSTVPIPTSYKSALQNPLWFNSMKEEYDALIKNGTWDLVPR 215
M+TR + KP LS+ + P+P +Y+S L NP W +M +E+ ALI NGTW LVPR
Sbjct: 1 MVTRSKTSSLKPVDRVVLSAIS-PLPANYRSTLANPNWRAAMAKEFKALINNGTWRLVPR 59
Query: 216 PRDANVVTGKWLFRHQ 263
P ANV+TGKW+F+H+
Sbjct: 60 PPGANVITGKWIFKHK 75