BLASTX nr result
ID: Rheum21_contig00037585
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00037585 (854 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 306 8e-81 ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr... 304 3e-80 gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily p... 304 3e-80 ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi... 302 9e-80 gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis... 293 5e-77 gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus pe... 289 8e-76 ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi... 286 9e-75 ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi... 285 1e-74 ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi... 282 1e-73 ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 277 3e-72 gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus... 275 2e-71 ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 274 3e-71 ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi... 269 1e-69 ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi... 265 1e-68 ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi... 254 4e-65 ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ... 249 9e-64 ref|XP_002880012.1| pentatricopeptide repeat-containing protein ... 243 5e-62 ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr... 236 8e-60 ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar... 231 2e-58 ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps... 226 8e-57 >ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Vitis vinifera] gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera] Length = 533 Score = 306 bits (783), Expect = 8e-81 Identities = 150/234 (64%), Positives = 189/234 (80%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISDHP L+ L+++CTTM+DL+KI A ++KTGL + +A+S VLAF AT P GDI+YA Sbjct: 19 KFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAY 78 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF +I + NLF+WNTIIRGFS+SS PH AI LFI+ML+ S+V+PHRLTYPS+FKAYAQ+ Sbjct: 79 LVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQL 138 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLA GAQLHGRV KLGL PF+RN IIYMYANCGFL E K F E + D+VAWNSM Sbjct: 139 GLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYE-RMDFDIVAWNSM 197 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GLAKCGEVDE R+LFD+M + T +SWN+M+SGYVR G++ + +LFG+M+E Sbjct: 198 IMGLAKCGEVDESRKLFDEMPLRNT-VSWNSMISGYVRNGRLREALDLFGQMQE 250 Score = 78.6 bits (192), Expect = 3e-12 Identities = 47/147 (31%), Positives = 81/147 (55%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G++ + +FD + RN +WN++I G+ R+ A+ LF +M + +KP T SL Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQ-EERIKPSEFTMVSL 263 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A++G + G +H ++K + + V +II MY CG + EA ++F E Sbjct: 264 LNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVF-EMAPLKG 322 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKM 103 + +WN+M+LGLA G +E +LF ++ Sbjct: 323 LSSWNTMILGLAMNGCENEAIQLFSRL 349 >ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina] gi|557539373|gb|ESR50417.1| hypothetical protein CICLE_v10031197mg [Citrus clementina] Length = 534 Score = 304 bits (778), Expect = 3e-80 Identities = 152/234 (64%), Positives = 185/234 (79%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISD P+L+ LD+ CT+M+DLKKI A +IKTGL +D +A SR+LAF T P GDI+YA Sbjct: 15 KFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAF-CTSPAGDINYAY 73 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF +I+ NLF WNTIIRGFS+SS P AILLFI+MLV S ++P RLTYPSLFKAYAQ+ Sbjct: 74 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 133 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLA+ GAQLHGRV K GL+ F+ N IIYMYANCGFL EA +F+E D E DVVAWNSM Sbjct: 134 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDTEFDVVAWNSM 193 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GLAKCGE+DE RRLFDKM + T +SWN+M+SGYVR K ++ ELF +M+E Sbjct: 194 IIGLAKCGEIDESRRLFDKMVSRNT-VSWNSMISGYVRNVKFKEALELFREMQE 246 Score = 82.8 bits (203), Expect = 1e-13 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G+I + +FD++ +RN +WN++I G+ R+ A+ LF EM + +KP T SL Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSL 259 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A++G + G +H + + + V AII MY CG + A ++FN + Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK-G 318 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKM---GKKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + WNSM+ GLA G +E +LF + K IS+ +++ GK+ Q + F Sbjct: 319 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 378 Query: 12 KMRE 1 M E Sbjct: 379 LMTE 382 >gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma cacao] Length = 538 Score = 304 bits (778), Expect = 3e-80 Identities = 151/234 (64%), Positives = 187/234 (79%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISD P L+ L+ NCT+M+DLKK+ AQ+IKTGL D +A SRVLAF + P GD++YA Sbjct: 17 KFISDQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRVLAFCVS-PAGDMNYAY 75 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF +I+N NLFTWNTIIRGFS+SS P AI LFI+MLV S+++P RLTYPS+FKAYAQ+ Sbjct: 76 LVFTQIKNPNLFTWNTIIRGFSQSSNPQIAISLFIDMLVGSSIQPERLTYPSVFKAYAQL 135 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLA G QLHGRV KLGLD F+RN IIYMYANCG L EA ++F+E+ ELD+VAWNSM Sbjct: 136 GLACDGRQLHGRVIKLGLDYDQFIRNTIIYMYANCGLLSEAWRMFDEEHMELDIVAWNSM 195 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GLAKCGEVDE RRLF+KM + T +SWN+M+SGYVR G+ + ELF +M+E Sbjct: 196 IIGLAKCGEVDESRRLFNKMVSRNT-VSWNSMISGYVRNGRFLEALELFQEMQE 248 Score = 81.6 bits (200), Expect = 3e-13 Identities = 49/147 (33%), Positives = 80/147 (54%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G++ + +F+++ +RN +WN++I G+ R+ A+ LF EM + ++P T SL Sbjct: 203 GEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEALELFQEMQ-EEHIRPSEFTMVSL 261 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G G +H + K + + V AII MY CG ++A ++F E Sbjct: 262 LNACACLGAITQGKWIHDYILKQNFELNGIVVTAIIDMYCKCGNAEKALQVFTTSPKE-G 320 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKM 103 + WNSM+LGLA G +E R+LF K+ Sbjct: 321 LSCWNSMILGLATNGCENEARQLFSKL 347 >ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Citrus sinensis] Length = 534 Score = 302 bits (774), Expect = 9e-80 Identities = 151/234 (64%), Positives = 184/234 (78%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISD P+L+ LD+ CT+M+DLKKI A +IKTGL +D +A SR+L F T P GDI+YA Sbjct: 15 KFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTF-CTSPAGDINYAY 73 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF +I+ NLF WNTIIRGFS+SS P AILLFI+MLV S ++P RLTYPSLFKAYAQ+ Sbjct: 74 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 133 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLA+ GAQLHGRV K GL+ F+ N IIYMYANCGFL EA +F+E D E DVVAWNSM Sbjct: 134 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 193 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GLAKCGE+DE RRLFDKM + T +SWN+M+SGYVR K ++ ELF +M+E Sbjct: 194 IIGLAKCGEIDESRRLFDKMVSRNT-VSWNSMISGYVRNVKFKEALELFREMQE 246 Score = 79.7 bits (195), Expect = 1e-12 Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G+I + +FD++ +RN +WN++I G+ R+ A+ LF EM + +KP T SL Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSL 259 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A++G + G +H + + + V AII MY CG + A ++FN + Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK-G 318 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKMGKKR---TIISWNTMMSGYVRKGKIEQVFELFG 13 + WNSM+ GLA G +E +LF + S+ +++ GK+ Q + F Sbjct: 319 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLTPDYTSFIAVLTACNHSGKVNQAKDYFT 378 Query: 12 KMRE 1 M E Sbjct: 379 LMTE 382 >gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis] gi|587904202|gb|EXB92403.1| hypothetical protein L484_021387 [Morus notabilis] Length = 530 Score = 293 bits (750), Expect = 5e-77 Identities = 152/233 (65%), Positives = 182/233 (78%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISD P L+ L++ C TM DL+KI A +IKTGL T+A SR+LAF A+ P G+I+YAL Sbjct: 21 KFISDQPHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLLAFCAS-PAGNINYAL 79 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF +I+N NLF WNTIIRGFSRSS P AI LFI+MLV S ++P RLTYPS+FKAYAQ+ Sbjct: 80 MVFSQIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVGSPLEPQRLTYPSVFKAYAQL 139 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLA GAQLHGRV KLGLD FVRN II+MY NCGFL EA +LF+E ELD+VAWNSM Sbjct: 140 GLACFGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESS-ELDLVAWNSM 198 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMR 4 ++GL+KCGEV E RRLFD+M R +SWN+M+SGYVR GK + ELFGKM+ Sbjct: 199 IMGLSKCGEVGESRRLFDRM-PLRNSVSWNSMISGYVRNGKCVEALELFGKMQ 250 Score = 80.9 bits (198), Expect = 5e-13 Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 4/184 (2%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G++ + +FDR+ RN +WN++I G+ R+ A+ LF +M + +K T SL Sbjct: 206 GEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQGEG-IKASEFTMVSL 264 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A ++G + G +H + K G++ + V AII MY CG +++A +F + +L Sbjct: 265 LNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGSVNKALSVF-KTAPKLG 323 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKMGKKRTI----ISWNTMMSGYVRKGKIEQVFELF 16 + WNSM++GLA G +E LF ++ + +S+ +++ G +++ + F Sbjct: 324 LSCWNSMVMGLAMNGCEEEALELFSRLESSIDLRPDGVSFLAVLTACNHSGMVDKARDYF 383 Query: 15 GKMR 4 MR Sbjct: 384 SLMR 387 >gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus persica] Length = 297 Score = 289 bits (740), Expect = 8e-76 Identities = 147/234 (62%), Positives = 182/234 (77%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFIS+ P L+ L++ CT M+DL+KI A +IKTGL DTVA SRVLAF A+ P G+I+YA Sbjct: 16 KFISERPHLSMLEKQCTNMKDLQKIHAHLIKTGLVSDTVAASRVLAFCAS-PAGNINYAY 74 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF I+N NLF WNTIIRGFS S +P AI LFI+MLV SA++PHRLTYPS+FKAYAQ+ Sbjct: 75 MVFRNIQNPNLFIWNTIIRGFSESPSPEIAISLFIDMLVTSAIEPHRLTYPSVFKAYAQL 134 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLAQ GAQLHGR+ KLGL+ F+RN II+MYANCGFL EA ++F+E D E D VAWNSM Sbjct: 135 GLAQDGAQLHGRILKLGLESDQFIRNTIIHMYANCGFLIEARRMFDE-DLECDTVAWNSM 193 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GL+K GEV E +RLFDK R +SWN+M+SG+VR GK + ELF +M+E Sbjct: 194 IMGLSKWGEVSEAKRLFDKF-SLRNSVSWNSMISGFVRNGKYTEALELFSEMQE 246 >ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 550 Score = 286 bits (731), Expect = 9e-75 Identities = 149/234 (63%), Positives = 177/234 (75%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISD P L L+ CT M+DL+KI A +IKTGL DTVA SRVLAF A+ P GDI+YA Sbjct: 16 KFISDKPHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCAS-PAGDINYAY 74 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF I N NLF WNTIIRGFS SS P AI LFI+MLV S V+P RLTYPS+FKAYAQ+ Sbjct: 75 MVFRHIHNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSTVQPQRLTYPSVFKAYAQL 134 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLA GAQLHGRV KLGL+ FVRN II+MY+NCG L EA ++F+E D E D+VAWNSM Sbjct: 135 GLAHDGAQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRVFDE-DLEFDIVAWNSM 193 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GL+KCGEV E RRLFDKM +R ISWN+M+ G VR G + +LFG+M++ Sbjct: 194 IMGLSKCGEVGESRRLFDKM-PQRNSISWNSMIGGSVRNGMYTEALDLFGEMQK 246 Score = 89.0 bits (219), Expect = 2e-15 Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G++ + +FD++ RN +WN++I G R+ A+ LF EM +KP T SL Sbjct: 201 GEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEALDLFGEMQKQK-IKPSEFTMVSL 259 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A AQ+G + G +H ++K + +P V AII MY+ CG +++A +F E Sbjct: 260 LNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIINMYSKCGSIEKAVHVF-EAAPRTG 318 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKMGKKRTI---ISWNTMMSGYVRKGKIEQVFELFG 13 + WNS+++GLA G +E LF ++ + +S+ +++ G +E+ + F Sbjct: 319 LSCWNSIIMGLATNGCEEEAIELFSRLKSSSFVPDDVSFLGVLTACSHSGMVEKARKYFS 378 Query: 12 KMRE 1 MRE Sbjct: 379 VMRE 382 >ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Solanum tuberosum] Length = 522 Score = 285 bits (730), Expect = 1e-74 Identities = 148/235 (62%), Positives = 180/235 (76%), Gaps = 1/235 (0%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPP-GDIHYA 526 KFISD P L L+ CTTM DLKKI A +IK+GL +D +A SRVLAF+A PP GDI+YA Sbjct: 13 KFISDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIASSRVLAFSAKSPPIGDINYA 72 Query: 525 LSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQ 346 VF IEN NLFTWNTIIRGFS SS P +AI LFIEML +S V+PH LTYPS+FKAYA+ Sbjct: 73 NLVFTHIENPNLFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYAR 132 Query: 345 MGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNS 166 GL + GAQLHGR+ KLGL+ F+RN ++YMYA+CGFL EA KLF+ED+ E DVV+WNS Sbjct: 133 GGLVKNGAQLHGRIIKLGLEFDTFIRNTMLYMYASCGFLVEARKLFDEDEIE-DVVSWNS 191 Query: 165 MMLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 M++GLAK GE+D+ RLF KM R +SWN+M+SG+VR GK + ELF M+E Sbjct: 192 MIMGLAKSGEIDDSWRLFSKM-STRNDVSWNSMISGFVRNGKWNEALELFSTMQE 245 Score = 77.4 bits (189), Expect = 6e-12 Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G+I + +F ++ RN +WN++I GF R+ + A+ LF M ++ +KP T SL Sbjct: 200 GEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEALELFSTMQEEN-IKPSEFTLVSL 258 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A +G + G ++ VKK ++ + V AII MY CG ++ A +F ++ Sbjct: 259 LNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCKCGNVEMAWHVFISISNK-G 317 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKMG---KKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + +WNSM+LGLA G D+ +LF ++ K +S+ +++ G +++ + F Sbjct: 318 LSSWNSMILGLATNGFEDDAIKLFARLQCSILKPDSVSFIGVLTACNHSGLVDKAKDYFQ 377 Query: 12 KMRE 1 M++ Sbjct: 378 LMKK 381 >ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Solanum lycopersicum] Length = 522 Score = 282 bits (722), Expect = 1e-73 Identities = 146/235 (62%), Positives = 179/235 (76%), Gaps = 1/235 (0%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPP-GDIHYA 526 KFI D P L L+ CTTM DLKKI A +IK+GL +D +A SRVLAF+A PP GDI+YA Sbjct: 13 KFILDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIGDINYA 72 Query: 525 LSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQ 346 VF IEN N FTWNTIIRGFS SS P +AI LFIEML +S V+PH LTYPS+FKAYA+ Sbjct: 73 NLVFTHIENPNPFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYAR 132 Query: 345 MGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNS 166 G+A+ GAQLHGR+ KLGL+ F+RN ++YMYA+CGFL EA KLF+ED+ E DVV+WNS Sbjct: 133 GGIAKNGAQLHGRIMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIE-DVVSWNS 191 Query: 165 MMLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 M++GLAK GE+D+ RLF KM R +SWN+M+SG+VR GK + ELF M+E Sbjct: 192 MIIGLAKSGEIDDSWRLFSKM-PTRNDVSWNSMISGFVRNGKWNEALELFSTMQE 245 Score = 77.0 bits (188), Expect = 8e-12 Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 3/183 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G+I + +F ++ RN +WN++I GF R+ + A+ LF M ++ VKP T SL Sbjct: 200 GEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEALELFSTMQEEN-VKPSEFTLVSL 258 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A +G + G ++ VKK ++ + V AII MY C ++ A +F ++ Sbjct: 259 LNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNK-G 317 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKMG---KKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + +WNSM+LGLA G D+ +LF ++ K +S+ +++ G +E+ + F Sbjct: 318 LSSWNSMILGLATNGFEDDAIKLFARLQCSILKPDSVSFIGVLTACNHSGLVEKAKDYFQ 377 Query: 12 KMR 4 M+ Sbjct: 378 LMK 380 >ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 533 Score = 277 bits (709), Expect = 3e-72 Identities = 139/233 (59%), Positives = 178/233 (76%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 K ISD L+ LD+NCTTM+DLKKI +Q+IKTGL +DT A SR+LAF A+ P GDI+YA Sbjct: 17 KLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCAS-PAGDINYAY 75 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 VF +I+N N+F WNTIIRGFSRSS P +I L+I+ML+ S V+P RLTYPS+FKA+AQ+ Sbjct: 76 LVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQL 135 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 LA GAQLHG++ KLGL+ F+RN I++MY NCGF EA K+F+ + D+VAWN+M Sbjct: 136 DLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDR-GMDFDIVAWNTM 194 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMR 4 ++G+AKCG VDE RRLFDKM R +SWN+M+SGYVR G+ ELF KM+ Sbjct: 195 IMGVAKCGLVDESRRLFDKM-SLRNAVSWNSMISGYVRNGRFFDALELFQKMQ 246 Score = 85.9 bits (211), Expect = 2e-14 Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 3/223 (1%) Frame = -3 Query: 660 NCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALSVFDRIENRNLFTW 481 NC + +K+ G+ D VA + ++ A G + + +FD++ RN +W Sbjct: 169 NCGFTSEARKV----FDRGMDFDIVAWNTMIMGVAKC--GLVDESRRLFDKMSLRNAVSW 222 Query: 480 NTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQMGLAQCGAQLHGRVK 301 N++I G+ R+ A+ LF +M V+ ++P T SL A A +G + G +H + Sbjct: 223 NSMISGYVRNGRFFDALELFQKMQVER-IEPSEFTMVSLLNACACLGAIRQGEWIHDYMV 281 Query: 300 KLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSMMLGLAKCGEVDECR 121 K + +P V AII MY+ CG +D+A ++F + WNSM+LGLA G+ +E Sbjct: 282 KKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRR-GLSCWNSMILGLAMNGQENEAL 340 Query: 120 RLFDKMGK---KRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 +LF + + +S+ +++ G +++ + F MR+ Sbjct: 341 QLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRD 383 >gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris] Length = 525 Score = 275 bits (702), Expect = 2e-71 Identities = 145/233 (62%), Positives = 174/233 (74%) Frame = -3 Query: 699 FISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALS 520 FISDHP LT L CT M+DL+KI IIKTGL D +A SRVL F A+ GDI+YA Sbjct: 19 FISDHPCLTMLQNQCTNMKDLQKIHPHIIKTGLALDHIAASRVLTFCASSS-GDINYAYL 77 Query: 519 VFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQMG 340 VF I N NL+ WNTIIRGFSRSS P FAI LF++ML SAV+P RLTYPS+FKAYAQ+G Sbjct: 78 VFTGIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLY-SAVEPQRLTYPSVFKAYAQLG 136 Query: 339 LAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSMM 160 GAQLHGRV KLGL++ F+ N I+YMYAN G + EA ++F+E ELDVVA NSM+ Sbjct: 137 AGHDGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDE-PLELDVVACNSMI 195 Query: 159 LGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 +GLAKCGEVD+ RRLFD M RT +SWN+M+SGYVR G++ + ELF KM+E Sbjct: 196 MGLAKCGEVDKSRRLFDNM-PTRTAVSWNSMISGYVRNGRLTEGLELFRKMQE 247 Score = 73.9 bits (180), Expect = 7e-11 Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G++ + +FD + R +WN++I G+ R+ + LF +M + V+P T SL Sbjct: 202 GEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELFRKMQ-EEGVEPSEFTMVSL 260 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G Q G +H +K+ + V AII MY CG +++A ++F Sbjct: 261 LSACAHLGALQHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKCGSIEKAVEVFAASPTR-G 319 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKMGK---KRTIISWNTMMSGYVRKGKIEQVFELFG 13 + WNS+++GLA G E F K+ K +S+ +++ G + + + F Sbjct: 320 LPCWNSIIIGLALNGHEREAIEYFSKLESSNIKPDCVSFIGVLTACKYLGAVREARDYFA 379 Query: 12 KMRE 1 M + Sbjct: 380 LMMD 383 >ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 509 Score = 274 bits (701), Expect = 3e-71 Identities = 139/224 (62%), Positives = 174/224 (77%), Gaps = 1/224 (0%) Frame = -3 Query: 669 LDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALSVFDRIENRNL 490 LD+NCT+M+DL+KI AQ+IKTGL +DT+A SRVLAF T P GDI+YA VF +I N NL Sbjct: 2 LDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAF-CTSPAGDINYAYLVFTQIRNPNL 60 Query: 489 FTWNTIIRGFSRSSAPHFAILLFIEMLVDS-AVKPHRLTYPSLFKAYAQMGLAQCGAQLH 313 F WNTIIRGFS+SS PH AI LFI+M+ S +P RLTYPS+FKAYAQ+GLA GAQLH Sbjct: 61 FVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLH 120 Query: 312 GRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSMMLGLAKCGEV 133 GRV KLGL+ F++N I+ MY NCGFL EA ++F + DVV WN+M++GLAKCGE+ Sbjct: 121 GRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIF-DGATGFDVVTWNTMIIGLAKCGEI 179 Query: 132 DECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 D+ RRLFDKM + T +SWN+M+SGYVRKG+ + ELF +M+E Sbjct: 180 DKSRRLFDKMLLRNT-VSWNSMISGYVRKGRFFEAMELFSRMQE 222 Score = 83.2 bits (204), Expect = 1e-13 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G+I + +FD++ RN +WN++I G+ R A+ LF M + +KP T SL Sbjct: 177 GEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQ-EEGIKPSEFTMVSL 235 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G + G +H + K + V AII MY+ CG +D+A ++F + Sbjct: 236 LNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKK-G 294 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKM---GKKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + WNS++LGLA G +E RLF K+ K +S+ +++ G +++ + F Sbjct: 295 LSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFL 354 Query: 12 KMRE 1 M E Sbjct: 355 LMSE 358 >ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Cucumis sativus] gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Cucumis sativus] Length = 543 Score = 269 bits (687), Expect = 1e-69 Identities = 135/232 (58%), Positives = 178/232 (76%) Frame = -3 Query: 696 ISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALSV 517 IS+ P L+ +D+ CTTMRDL++ A +IK+G ++ A SR+LAF A+ P G++ YA V Sbjct: 21 ISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCAS-PLGNMDYAYLV 79 Query: 516 FDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQMGL 337 F +++N NLF+WNT+IRGFS+SS P A+ LFI+MLV S V+P RLTYPS+FKAY+Q+GL Sbjct: 80 FLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGL 139 Query: 336 AQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSMML 157 A GAQLHGR+ KLGL PF+RN I+YMYA GFL EA ++FN+ + E DVV+WNSM+L Sbjct: 140 AHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQ-EMEFDVVSWNSMIL 198 Query: 156 GLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 GLAKCGE+DE R+LFDKM K ISWN+M+ GYVR G ++ +LF KM+E Sbjct: 199 GLAKCGEIDESRKLFDKMPVKNP-ISWNSMIGGYVRNGMFKEALKLFIKMQE 249 Score = 82.4 bits (202), Expect = 2e-13 Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 3/183 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G+I + +FD++ +N +WN++I G+ R+ A+ LFI+M + ++P T SL Sbjct: 204 GEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQ-EERIQPSEFTMVSL 262 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A AQ+G + G +H +KK L + V AII MY CG + A ++F + Sbjct: 263 LNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCR-S 321 Query: 183 VVAWNSMMLGLAKCGEVDECRRLF---DKMGKKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + +WNSM+ GLA G E +F + K IS+ +++ +++ E F Sbjct: 322 LSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFS 381 Query: 12 KMR 4 +M+ Sbjct: 382 RMK 384 Score = 60.8 bits (146), Expect = 6e-07 Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 2/151 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G I AL VF++I R+L +WN++I G + + AIL+F +ML S++KP +++ ++ Sbjct: 305 GSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVF-KMLESSSLKPDCISFMAV 363 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVR--NAIIYMYANCGFLDEATKLFNEDDHE 190 A + G + R+K P ++ N ++ M + GFL+EA + E Sbjct: 364 LTACNHGAMVDEGMEFFSRMKNT-YRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIE 422 Query: 189 LDVVAWNSMMLGLAKCGEVDECRRLFDKMGK 97 D + W ++ G + +R +K+ + Sbjct: 423 KDAIIWGCLLSACRIYGNTEMAKRAAEKVNE 453 >ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Glycine max] Length = 534 Score = 265 bits (678), Expect = 1e-68 Identities = 142/233 (60%), Positives = 173/233 (74%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISD P LT L CT M+DL+KI A IIKTGL TVA SRVL F A+ GDI+YA Sbjct: 20 KFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSS-GDINYAY 78 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 +F I + NL+ WNTIIRGFSRSS PH AI LF++ML S+V P RLTYPS+FKAYAQ+ Sbjct: 79 LLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLC-SSVLPQRLTYPSVFKAYAQL 137 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 G GAQLHGRV KLGL++ F++N IIYMYAN G L EA ++F+E +LDVVA NSM Sbjct: 138 GAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDE-LVDLDVVACNSM 196 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMR 4 ++GLAKCGEVD+ RRLFD M RT ++WN+M+SGYVR ++ + ELF KM+ Sbjct: 197 IMGLAKCGEVDKSRRLFDNM-PTRTRVTWNSMISGYVRNKRLMEALELFRKMQ 248 Score = 70.9 bits (172), Expect = 6e-10 Identities = 46/147 (31%), Positives = 75/147 (51%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G++ + +FD + R TWN++I G+ R+ A+ LF +M + V+P T SL Sbjct: 204 GEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGER-VEPSEFTMVSL 262 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G + G +H VK+ + + V AII MY CG + +A ++F E Sbjct: 263 LSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVF-EASPTRG 321 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKM 103 + WNS+++GLA G + F K+ Sbjct: 322 LSCWNSIIIGLALNGYERKAIEYFSKL 348 >ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like [Cicer arietinum] Length = 536 Score = 254 bits (648), Expect = 4e-65 Identities = 130/233 (55%), Positives = 167/233 (71%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFISD P LT L +CTT++ I IIKTGL + +A +RVL F A+ P G+I+YA Sbjct: 20 KFISDQPCLTMLQNHCTTLKHFHMIYPHIIKTGLTHNPIASTRVLTFCAS-PSGNINYAY 78 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 +F R+ N NL++WNTIIR FSRSS P FAI LF++ML S ++P LTYPS+FKAYAQ+ Sbjct: 79 KLFARMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLY-SQIQPQHLTYPSVFKAYAQL 137 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 G+QLHG V KLGL R F+ N IIYMYAN G L EA ++F+E DVVA+NSM Sbjct: 138 SAGDYGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAKRVFDEKLELGDVVAFNSM 197 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMR 4 ++G AKCGE+DE R+LFD+M RT ++WN+M+SGYVR GK+ + ELF KM+ Sbjct: 198 IMGFAKCGEIDEARKLFDEM-FTRTSVTWNSMISGYVRNGKLMEALELFHKMQ 249 Score = 82.8 bits (203), Expect = 1e-13 Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 4/231 (1%) Frame = -3 Query: 687 HPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVAL-SRVLAFTATHPPGDIHYALSVFD 511 H + + N + + K++ + ++ G D VA S ++ F G+I A +FD Sbjct: 162 HNTIIYMYANSGLLSEAKRVFDEKLELG---DVVAFNSMIMGFAKC---GEIDEARKLFD 215 Query: 510 RIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQMGLAQ 331 + R TWN++I G+ R+ A+ LF +M ++ V+P T SL A A +G Q Sbjct: 216 EMFTRTSVTWNSMISGYVRNGKLMEALELFHKMQLEERVEPSEFTMVSLLNACAHLGALQ 275 Query: 330 CGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSMMLGL 151 G +H +K+ + + V AII MY CG ++ A ++F+ + WNS+++GL Sbjct: 276 HGKWVHDYIKRNDFELNVIVLTAIIDMYCKCGSVENAIQVFDTYPGR-GLSCWNSIIIGL 334 Query: 150 AKCGEVDECRRLFDKMGK---KRTIISWNTMMSGYVRKGKIEQVFELFGKM 7 A G E F ++ K +S+ +++ G +++ + F M Sbjct: 335 AMNGHEREAFEFFSELELSKFKPDSVSFIGVLTACKHLGAVDKAKDYFALM 385 >ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 542 Score = 249 bits (636), Expect = 9e-64 Identities = 133/236 (56%), Positives = 167/236 (70%), Gaps = 3/236 (1%) Frame = -3 Query: 702 KFISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYAL 523 KFIS+HP LT L +CTT+ +I IIKTGL + +A +R L F A+ P G+I+YA Sbjct: 23 KFISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCAS-PSGNINYAY 81 Query: 522 SVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQM 343 +F R+ N NL++WNTIIR FSRSS P FAI LF++ML S ++P LTYPS+FKAYAQ+ Sbjct: 82 KLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLY-SQIQPQYLTYPSVFKAYAQL 140 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHEL---DVVAW 172 G A GAQLHGRV KLGL F+ N IIYMYAN G + EA ++F+ EL DVVA Sbjct: 141 GHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAI 200 Query: 171 NSMMLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMR 4 NSM++G AKCGE+DE R LFD M RT +SWN+M+SGYVR GK+ + ELF KM+ Sbjct: 201 NSMIMGYAKCGEIDESRNLFDDM-ITRTSVSWNSMISGYVRNGKLMEALELFNKMQ 255 Score = 72.4 bits (176), Expect = 2e-10 Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 4/183 (2%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G+I + ++FD + R +WN++I G+ R+ A+ LF +M V+ + T SL Sbjct: 211 GEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEG-FEVSEFTMVSL 269 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G Q G +H +K+ + + V AII MY CG ++ A ++F E Sbjct: 270 LNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVF-ETCPRRG 328 Query: 183 VVAWNSMMLGLAKCGEVDECRRLFDKMGKKRTI----ISWNTMMSGYVRKGKIEQVFELF 16 + WNS+++GLA G E F K+ + + +S+ +++ G I + + F Sbjct: 329 LSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYF 388 Query: 15 GKM 7 M Sbjct: 389 ELM 391 >ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 542 Score = 243 bits (621), Expect = 5e-62 Identities = 128/234 (54%), Positives = 168/234 (71%), Gaps = 1/234 (0%) Frame = -3 Query: 699 FISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALS 520 F+S + L +D C+TMR+LK+I A +IKTGL DTVA SRVLAF P D +YA Sbjct: 21 FVSGNTCLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASP-SDRNYAYL 79 Query: 519 VFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDS-AVKPHRLTYPSLFKAYAQM 343 VF RI ++N F WNTIIRGFSRSS P AI +FI+ML S +VKP RLTYPS+FKAYA + Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASL 139 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 GLA+ G QLHGRV K GL+ F+RN +++MY CG L EA +LF DVVAWNS+ Sbjct: 140 GLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLF-VGMMGFDVVAWNSI 198 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GLAKCG +D+ ++LFD+M +R +SWN+M+SG+VR G+ + E+F +M+E Sbjct: 199 IMGLAKCGLIDQAQKLFDEM-PQRNGVSWNSMISGFVRNGRFKDALEMFREMQE 251 Score = 84.7 bits (208), Expect = 4e-14 Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G I A +FD + RN +WN++I GF R+ A+ +F EM + VKP T SL Sbjct: 206 GLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQ-ERDVKPDGFTMVSL 264 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G ++ G +H + + + + V A+I MY CG +E K+F E Sbjct: 265 LNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVF-ECAPTKQ 323 Query: 183 VVAWNSMMLGLAKCGEVDECRRLF---DKMGKKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + WNSM+LGLA G + LF ++ G + +S+ +++ G++ + E F Sbjct: 324 LSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFR 383 Query: 12 KMRE 1 MRE Sbjct: 384 LMRE 387 >ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum] gi|557112734|gb|ESQ53018.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum] Length = 546 Score = 236 bits (602), Expect = 8e-60 Identities = 119/232 (51%), Positives = 164/232 (70%) Frame = -3 Query: 696 ISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALSV 517 +S + + +D C+TMR+LK+I A +IKTGL DT+A SRVLAF T P D+ YA + Sbjct: 22 VSGNSHIRLIDTQCSTMRELKQIHANLIKTGLISDTIAASRVLAFCCTSP-SDMSYAYLL 80 Query: 516 FDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSLFKAYAQMGL 337 F RI ++N F WNTIIRGFSRSS P +I +FI+M ++ KP RLTYPS+FKAYA +G Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMSITIFIDMFSSASAKPQRLTYPSVFKAYASLGK 140 Query: 336 AQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSMML 157 A+ G QLHG V K GL+ F+RN +++MYA CG EA ++F H DVVAWNSMM+ Sbjct: 141 ARDGMQLHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMAMKH-FDVVAWNSMMM 199 Query: 156 GLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 GLA+ G +++ ++LFD+M +R ISWN+M+SG+V+ G+ + E+F KM+E Sbjct: 200 GLARYGLIEQAQKLFDEM-PQRNEISWNSMISGFVKNGRFKDALEMFRKMQE 250 Score = 88.6 bits (218), Expect = 3e-15 Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 3/203 (1%) Frame = -3 Query: 600 HRDTVALSRVLAFTATHPPGDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLF 421 H D VA + ++ A + G I A +FD + RN +WN++I GF ++ A+ +F Sbjct: 188 HFDVVAWNSMMMGLARY--GLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMF 245 Query: 420 IEMLVDSAVKPHRLTYPSLFKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYAN 241 +M + VKP T SL A A +G ++ G +H + K + + V A+I MY Sbjct: 246 RKMQ-ERNVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVKNRFELNSIVITALIDMYCK 304 Query: 240 CGFLDEATKLFNEDDHELDVVAWNSMMLGLAKCGEVDECRRLFDKMGK---KRTIISWNT 70 CG ++E ++F E + WNSM+LGLA G + LF ++ + +S+ Sbjct: 305 CGCIEEGLRVF-ESAPNKQLSCWNSMVLGLANNGYEERAMDLFSELESSDLEPDSVSFIG 363 Query: 69 MMSGYVRKGKIEQVFELFGKMRE 1 +++ GK+++ E F MRE Sbjct: 364 VLTACAYSGKVDEAGEFFRLMRE 386 >ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g42920, chloroplastic; Flags: Precursor gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana] gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 559 Score = 231 bits (590), Expect = 2e-58 Identities = 121/233 (51%), Positives = 163/233 (69%), Gaps = 1/233 (0%) Frame = -3 Query: 696 ISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALSV 517 +S + L +D C+TMR+LK+I A +IKTGL DTV SRVLAF P D++YA V Sbjct: 22 LSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASP-SDMNYAYLV 80 Query: 516 FDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDS-AVKPHRLTYPSLFKAYAQMG 340 F RI ++N F WNTIIRGFSRSS P AI +FI+ML S +VKP RLTYPS+FKAY ++G Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140 Query: 339 LAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSMM 160 A+ G QLHG V K GL+ F+RN +++MY CG L EA ++F DVVAWNSM+ Sbjct: 141 QARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF-LGMIGFDVVAWNSMI 199 Query: 159 LGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 +G AKCG +D+ + LFD+M +R +SWN+M+SG+VR G+ + ++F +M+E Sbjct: 200 MGFAKCGLIDQAQNLFDEM-PQRNGVSWNSMISGFVRNGRFKDALDMFREMQE 251 Score = 84.0 bits (206), Expect = 6e-14 Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G I A ++FD + RN +WN++I GF R+ A+ +F EM + VKP T SL Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ-EKDVKPDGFTMVSL 264 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G ++ G +H + + + + V A+I MY CG ++E +F E + Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-ECAPKKQ 323 Query: 183 VVAWNSMMLGLAKCGEVDECRRLF---DKMGKKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + WNSM+LGLA G + LF ++ G + +S+ +++ G++ + E F Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383 Query: 12 KMRE 1 M+E Sbjct: 384 LMKE 387 >ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella] gi|565472276|ref|XP_006293940.1| hypothetical protein CARUB_v10022931mg [Capsella rubella] gi|482562647|gb|EOA26837.1| hypothetical protein CARUB_v10022931mg [Capsella rubella] gi|482562648|gb|EOA26838.1| hypothetical protein CARUB_v10022931mg [Capsella rubella] Length = 555 Score = 226 bits (576), Expect = 8e-57 Identities = 121/234 (51%), Positives = 160/234 (68%), Gaps = 1/234 (0%) Frame = -3 Query: 699 FISDHPILTSLDQNCTTMRDLKKIQAQIIKTGLHRDTVALSRVLAFTATHPPGDIHYALS 520 F S L +D C+TMR+LK+I +IKTGL DTVA SRVLAF P D++YA Sbjct: 16 FPSPASYLRLIDTQCSTMRELKQIHGNLIKTGLISDTVAASRVLAFCCASP-SDMNYAYL 74 Query: 519 VFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDS-AVKPHRLTYPSLFKAYAQM 343 VF RI ++N F WNTIIRGFS+SS P AI +FI+ML S +VKP LTYPS+FKAY ++ Sbjct: 75 VFTRINHKNPFVWNTIIRGFSQSSFPEMAISIFIDMLCSSPSVKPQNLTYPSVFKAYGRL 134 Query: 342 GLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELDVVAWNSM 163 G A G QLHGRV K GL+ F+RN ++ MY G L EA ++F + DVVAWNSM Sbjct: 135 GQAIDGRQLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRIF-VGMTDFDVVAWNSM 193 Query: 162 MLGLAKCGEVDECRRLFDKMGKKRTIISWNTMMSGYVRKGKIEQVFELFGKMRE 1 ++GLAKCG + + ++LFD+M R +SWN+M+SG+VR G+ + E+F +M+E Sbjct: 194 IMGLAKCGLISQAQQLFDEM-PHRNEVSWNSMISGFVRNGRFKDALEMFREMQE 246 Score = 83.6 bits (205), Expect = 8e-14 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Frame = -3 Query: 543 GDIHYALSVFDRIENRNLFTWNTIIRGFSRSSAPHFAILLFIEMLVDSAVKPHRLTYPSL 364 G I A +FD + +RN +WN++I GF R+ A+ +F EM + VKP T SL Sbjct: 201 GLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFREMQ-ERNVKPDGFTMVSL 259 Query: 363 FKAYAQMGLAQCGAQLHGRVKKLGLDRHPFVRNAIIYMYANCGFLDEATKLFNEDDHELD 184 A A +G + G +H + + + + V A+I MY CG ++E K+F E + Sbjct: 260 LNACAYLGANEQGRWIHEYIARNRFELNSIVITALIEMYCKCGCIEEGLKVF-ECAPKKQ 318 Query: 183 VVAWNSMMLGLAKCGEVDECRRLF---DKMGKKRTIISWNTMMSGYVRKGKIEQVFELFG 13 + WNSM+LGLA G + LF ++ G + +S+ +++ G++ + F Sbjct: 319 LSCWNSMILGLANNGCEERAMDLFLELERFGLEPDSVSFIGVLTACAYSGEVHKAGGFFR 378 Query: 12 KMRE 1 MRE Sbjct: 379 LMRE 382