BLASTX nr result

ID: Rheum21_contig00037568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00037568
         (344 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ08637.1| hypothetical protein PRUPE_ppa005117mg [Prunus pe...    59   9e-07
ref|XP_002299808.2| hypothetical protein POPTR_0001s25890g, part...    57   2e-06
ref|XP_004294245.1| PREDICTED: uncharacterized protein LOC101291...    56   6e-06

>gb|EMJ08637.1| hypothetical protein PRUPE_ppa005117mg [Prunus persica]
          Length = 476

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -1

Query: 344 TSPGPEQANEDEDWYLKLSYGLRWLACIXXXXXXXXXXXXVFKFCNLLQQS---HVDGGR 174
           TSPGP++ + D+DWY++LSYG RW+                 +FCN+ Q S    ++   
Sbjct: 305 TSPGPKEGDPDDDWYIRLSYGPRWIMYFLGSGVMTVLLLMALRFCNVFQNSGEDRIEFQA 364

Query: 173 TADHDHQEPLLSPKED 126
                 + PLLSPK+D
Sbjct: 365 GEAESERTPLLSPKDD 380


>ref|XP_002299808.2| hypothetical protein POPTR_0001s25890g, partial [Populus
           trichocarpa] gi|550348192|gb|EEE84613.2| hypothetical
           protein POPTR_0001s25890g, partial [Populus trichocarpa]
          Length = 372

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -1

Query: 344 TSPGPEQANEDEDWYLKLSYGLRWLACIXXXXXXXXXXXXVFKFCNLLQQSHVDGGRTAD 165
           TSPGP +   DEDWY+KLSYG RW+  I              + CN+ +    DG +  +
Sbjct: 205 TSPGPAEGASDEDWYVKLSYGPRWIIYIIGSGVMTVLLLLALRLCNMFRPPGRDGYQAGE 264

Query: 164 -HDHQEPLLSPKED 126
               + PLLS K+D
Sbjct: 265 IESERTPLLSQKDD 278


>ref|XP_004294245.1| PREDICTED: uncharacterized protein LOC101291029 [Fragaria vesca
           subsp. vesca]
          Length = 441

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
 Frame = -1

Query: 344 TSPGPEQANEDEDWYLKLSYGLRWLACIXXXXXXXXXXXXVFKFCNLLQQSHVD----GG 177
           TSPGP++  +++DWY+K+SYG RWL                F+FC++ Q +  D     G
Sbjct: 270 TSPGPKEGIQEDDWYVKVSYGPRWLIYFLGSGVMTVLLLMAFRFCSIFQNAGEDRTDFQG 329

Query: 176 RTADHDHQEPLLSPKEDXXXXXXXXXXXXSDEDSXXXXXXXXXXXENKF-------NPLK 18
           R A    + PLL PK+D            S+++            E K        N L+
Sbjct: 330 REAS-PVRTPLLLPKDDDALSWGSSYECISNDEEDFEEFLGVSSLEGKSINGGDDNNTLR 388

Query: 17  FCVVC 3
            CV+C
Sbjct: 389 LCVIC 393