BLASTX nr result

ID: Rheum21_contig00037474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00037474
         (335 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    41   9e-08

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 40.8 bits (94), Expect(3) = 9e-08
 Identities = 16/37 (43%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
 Frame = +3

Query: 81  THVY-LTRKTYALKVNAKHWNKTTFGNIFKQHKEVED 188
           +H++   +K   +K+N+K WNKT FGNIF+Q ++V++
Sbjct: 274 SHMFNFVQKCKLVKINSKEWNKTQFGNIFRQLRQVDE 310



 Score = 33.5 bits (75), Expect(3) = 9e-08
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 1   KFEKMWTYKKYFENIVKQALRINTQGSHMFILQEK 105
           +FEKMW  +K ++++VK+       GSHMF   +K
Sbjct: 248 RFEKMWCTRKDYDSLVKRTWCTKFYGSHMFNFVQK 282



 Score = 26.6 bits (57), Expect(3) = 9e-08
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 242 SNKQINLQKRKKLLSFHKFFWSQRAKT 322
           + +++ L KR KLL ++  +W Q+ K+
Sbjct: 330 TQQELFLAKRNKLLEYNTTYWKQKCKS 356