BLASTX nr result
ID: Rheum21_contig00037399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037399
(318 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 118 9e-25
gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus pe... 111 9e-23
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat... 110 1e-22
ref|XP_002308333.2| pentatricopeptide repeat-containing family p... 108 6e-22
ref|XP_002333469.1| predicted protein [Populus trichocarpa] 108 6e-22
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr... 108 7e-22
ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat... 107 2e-21
ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat... 107 2e-21
ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat... 105 6e-21
gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus... 104 1e-20
ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat... 104 1e-20
ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat... 104 1e-20
gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protei... 103 3e-20
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis] 102 7e-20
ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Caps... 101 9e-20
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 99 6e-19
ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutr... 99 8e-19
ref|NP_196258.1| pentatricopeptide repeat-containing protein [Ar... 97 2e-18
ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat... 96 4e-18
ref|XP_002871218.1| pentatricopeptide repeat-containing protein ... 96 6e-18
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 118 bits (295), Expect = 9e-25
Identities = 61/101 (60%), Positives = 73/101 (72%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
VPDKELVESYL CLC G++LDA+RC +L K FT+PLSYSL IRALCRAG+
Sbjct: 801 VPDKELVESYLKCLCEVGKLLDARRCTEALCKLGFTIPLSYSLYIRALCRAGR-LEEALA 859
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
R TLDQ+++GSLV+ LL+RGRL EAL KVD+MK
Sbjct: 860 LVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMK 900
>gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
Length = 893
Score = 111 bits (278), Expect = 9e-23
Identities = 59/101 (58%), Positives = 70/101 (69%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
VPDKELVESYL CLC G + DA+RCI L KA FT+PL YSL IRALCRAG+
Sbjct: 645 VPDKELVESYLGCLCEVGELSDARRCIDLLSKAGFTIPLGYSLYIRALCRAGR-LQEAAA 703
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RS LDQ+ +GSLV+ LL+ G+L+ ALAKVD+MK
Sbjct: 704 LMDDVREDRSKLDQYTYGSLVHGLLRSGQLEAALAKVDSMK 744
>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 110 bits (276), Expect = 1e-22
Identities = 57/101 (56%), Positives = 69/101 (68%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
VPDKEL+E+YL CLC GR+LDA+RC SL +TVPLSYSL IRALCRAGK
Sbjct: 785 VPDKELIETYLGCLCEVGRVLDARRCTDSLQNFGYTVPLSYSLFIRALCRAGK-VEEALA 843
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
+ +DQ GS+V+ LL++GRL+EALAKVD MK
Sbjct: 844 LHEEVGEEKFIIDQLTFGSIVHGLLRKGRLEEALAKVDVMK 884
>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336797|gb|EEE91856.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1048
Score = 108 bits (271), Expect = 6e-22
Identities = 57/101 (56%), Positives = 72/101 (71%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
VPDKELV +YL CLC G++L+A++ + SL KA FTVP SYSL IRALCRAG
Sbjct: 800 VPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVPASYSLYIRALCRAG-MLEEALS 858
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
++TLD++ H SLV+ LLQ+GRL+EALAKVD+MK
Sbjct: 859 LVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMK 899
>ref|XP_002333469.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 108 bits (271), Expect = 6e-22
Identities = 57/101 (56%), Positives = 72/101 (71%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
VPDKELV +YL CLC G++L+A++ + SL KA FTVP SYSL IRALCRAG
Sbjct: 800 VPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVPASYSLYIRALCRAG-MLEEALS 858
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
++TLD++ H SLV+ LLQ+GRL+EALAKVD+MK
Sbjct: 859 LVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMK 899
>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
gi|557532087|gb|ESR43270.1| hypothetical protein
CICLE_v10010964mg [Citrus clementina]
Length = 1040
Score = 108 bits (270), Expect = 7e-22
Identities = 57/101 (56%), Positives = 70/101 (69%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
+PDKELVE+YLDCLC G + AK C+ L K FTVPLSYSL IRALCRAG+
Sbjct: 791 IPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVPLSYSLYIRALCRAGE-LEEALA 849
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RS LD+FV GSL++ L+QRG+++EALAKV+ MK
Sbjct: 850 LLDEVKEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMK 890
>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Citrus sinensis]
Length = 1040
Score = 107 bits (267), Expect = 2e-21
Identities = 57/101 (56%), Positives = 69/101 (68%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
+PDKELVE YLDCLC G + AK C+ L K FTVPLSYSL IRALCRAG+
Sbjct: 791 IPDKELVEIYLDCLCEVGMLQLAKSCMDVLRKVGFTVPLSYSLYIRALCRAGE-LEEALA 849
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RS LD+FV GSL++ L+QRG+++EALAKV+ MK
Sbjct: 850 LLDEVKEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMK 890
>ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
gi|449501176|ref|XP_004161299.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g06400,
mitochondrial-like [Cucumis sativus]
Length = 1037
Score = 107 bits (266), Expect = 2e-21
Identities = 54/104 (51%), Positives = 69/104 (66%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
S +PDKEL+E+YL CLC R+ DAK+CI L K F++PL+YSL IRALCRA K
Sbjct: 784 SKYIPDKELLETYLGCLCKLSRLSDAKKCIDHLRKVGFSIPLTYSLYIRALCRARKLDEA 843
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RS LD +++GSLV LLQ GR +EALAK+++MK
Sbjct: 844 LTLLEEVVGDERSKLDSYIYGSLVYGLLQTGRTEEALAKMNSMK 887
>ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cicer arietinum]
Length = 1045
Score = 105 bits (262), Expect = 6e-21
Identities = 54/104 (51%), Positives = 71/104 (68%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
S VPDKEL+E+YL CLC GRIL+A++CI SL + + VPLSYSL IRALCRAGK
Sbjct: 793 SGHVPDKELIETYLGCLCEVGRILEARKCIDSLQRFGYAVPLSYSLFIRALCRAGK-VEE 851
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
+S +++ +GS+V+ LL +G+L+EALAKV MK
Sbjct: 852 ALALIDGVGPEKSIVEKLTYGSIVHGLLHKGKLEEALAKVHGMK 895
>gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus vulgaris]
Length = 1069
Score = 104 bits (260), Expect = 1e-20
Identities = 53/100 (53%), Positives = 67/100 (67%)
Frame = +2
Query: 14 PDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXXX 193
PDKEL+E+YL CLC GR+L+A+RC SL +T PLSYSL IR LCRAG+
Sbjct: 821 PDKELIEAYLSCLCEVGRVLEARRCADSLQNFGYTAPLSYSLFIRTLCRAGR-VEEALAL 879
Query: 194 XXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
+S +DQ GS+V+ LL++GRL EALAKV+AMK
Sbjct: 880 ITEVGEEKSIIDQLTCGSIVHGLLRKGRLQEALAKVEAMK 919
>ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 1037
Score = 104 bits (259), Expect = 1e-20
Identities = 53/104 (50%), Positives = 72/104 (69%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
+A +PDKELVE+Y+ CLC ++ DA+RCI SL K FT LSYSL IRALCRAG+
Sbjct: 786 AAHIPDKELVETYIGCLCEVDKLSDARRCIDSLSKVGFTTSLSYSLYIRALCRAGR-LQE 844
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RSTLD++ +GS V+ LL+ G+++EALAK+++MK
Sbjct: 845 ASEMMDDIGEERSTLDRYTYGSFVHGLLRSGQVEEALAKMESMK 888
>ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 1038
Score = 104 bits (259), Expect = 1e-20
Identities = 53/104 (50%), Positives = 72/104 (69%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
+A +PDKELVE+Y+ CLC ++ DA+RCI SL K FT LSYSL IRALCRAG+
Sbjct: 786 AAHIPDKELVETYIGCLCEVDKLSDARRCIDSLSKVGFTTSLSYSLYIRALCRAGR-LQE 844
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RSTLD++ +GS V+ LL+ G+++EALAK+++MK
Sbjct: 845 ASEMMDDIGEERSTLDRYTYGSFVHGLLRSGQVEEALAKMESMK 888
>gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 1050
Score = 103 bits (256), Expect = 3e-20
Identities = 53/100 (53%), Positives = 70/100 (70%)
Frame = +2
Query: 14 PDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXXX 193
PDKEL+E+YL CLC G++L+A+ C SL K FTVPL YSL IRAL RAG+
Sbjct: 804 PDKELLETYLGCLCEVGKLLEARSCTDSLSKVGFTVPLRYSLYIRALSRAGR-LEEALEM 862
Query: 194 XXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
++TLD +V+GSLV+ LL++GR ++ALAKVD+MK
Sbjct: 863 LDNVGTEQATLDLYVYGSLVHGLLRKGRFEQALAKVDSMK 902
>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
Length = 1039
Score = 102 bits (253), Expect = 7e-20
Identities = 48/101 (47%), Positives = 72/101 (71%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
+PDKEL+E+YL C+C ++ DA++C+ SL K FTVPLS+SL +R+LCRAG+
Sbjct: 790 IPDKELIETYLACVCEVDKLSDARKCVDSLQKLGFTVPLSHSLYVRSLCRAGR-LEEALA 848
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
++TLDQ +GS+ + LL++GR++EALAK+D+MK
Sbjct: 849 LADEIGEEKTTLDQSTYGSIFHGLLRKGRVEEALAKMDSMK 889
>ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Capsella rubella]
gi|482555420|gb|EOA19612.1| hypothetical protein
CARUB_v10002874mg [Capsella rubella]
Length = 1016
Score = 101 bits (252), Expect = 9e-20
Identities = 53/104 (50%), Positives = 67/104 (64%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
S VPD+ELV+ YL CLC G DAK C+ SL K F+VP+ YS+ IRALCR GK
Sbjct: 764 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLCKIGFSVPVVYSIYIRALCRIGK-LEE 822
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
+S LDQ+ +GS+V+ LQRG+L EALAKV++MK
Sbjct: 823 ALSELDRFKGEKSLLDQYTYGSIVHGFLQRGQLQEALAKVNSMK 866
>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1072
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/101 (47%), Positives = 71/101 (70%)
Frame = +2
Query: 11 VPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXX 190
+PD+E+V +YL CLC GR+ +A++ SL + +T+PLSYSL IRALCR+G+
Sbjct: 823 IPDREVVGTYLSCLCEAGRLSEARKSTDSLCRIGYTIPLSYSLYIRALCRSGR-LEEALS 881
Query: 191 XXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RSTLDQ+ +G+LV+ LL++GR +EALAK+++MK
Sbjct: 882 LLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMK 922
>ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutrema salsugineum]
gi|557100203|gb|ESQ40566.1| hypothetical protein
EUTSA_v10012543mg [Eutrema salsugineum]
Length = 1036
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/104 (49%), Positives = 67/104 (64%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
S VPD+ELV+ YL CLC G I DAK C+ SL K F VP++YS+ IRALCR GK
Sbjct: 784 SGYVPDRELVQDYLGCLCEVGNIKDAKSCLVSLGKIGFPVPVAYSIFIRALCRIGK-LEE 842
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RS L+Q+ +GS+V+ LL++G L +AL KV++MK
Sbjct: 843 ALSELASFKGERSLLEQYTYGSIVHGLLEKGHLQKALDKVNSMK 886
>ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial; Flags: Precursor
gi|9758420|dbj|BAB08962.1| unnamed protein product
[Arabidopsis thaliana] gi|332003627|gb|AED91010.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1030
Score = 97.1 bits (240), Expect = 2e-18
Identities = 52/104 (50%), Positives = 65/104 (62%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
S VPD+ELV+ YL CLC G DAK C+ SL K F V ++YS+ IRALCR GK
Sbjct: 779 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGK-LEE 837
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RS LDQ+ +GS+V+ LLQRG L +AL KV++MK
Sbjct: 838 ALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
>ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Solanum lycopersicum]
Length = 1092
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +2
Query: 14 PDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXXXXXX 193
PDKEL+E YL CLC G++ DA+ C SL K F+ PL+YSL IR+LCRA +
Sbjct: 844 PDKELIEDYLGCLCELGKLRDARSCTESLLKLGFSTPLAYSLYIRSLCRAWR-LEEALAL 902
Query: 194 XXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
+ L Q+V+GSLV+ LLQ+G L+EALA++++MK
Sbjct: 903 INEVDDEQHVLSQYVYGSLVHGLLQKGNLEEALARIESMK 942
>ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317055|gb|EFH47477.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1029
Score = 95.5 bits (236), Expect = 6e-18
Identities = 52/104 (50%), Positives = 65/104 (62%)
Frame = +2
Query: 2 SALVPDKELVESYLDCLCHTGRILDAKRCIRSLPKACFTVPLSYSLLIRALCRAGKXXXX 181
S VPD+ELV+ YL CLC G DAK C+ SL K F VP++YS+ IRAL R GK
Sbjct: 777 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVPVAYSIYIRALSRIGK-LEE 835
Query: 182 XXXXXXXXXXHRSTLDQFVHGSLVNALLQRGRLDEALAKVDAMK 313
RS LDQ+ +GS+V+ LLQRG L +AL KV++MK
Sbjct: 836 ALSELASFEGDRSLLDQYTYGSIVHGLLQRGDLHKALDKVNSMK 879