BLASTX nr result
ID: Rheum21_contig00037321
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00037321 (274 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY13548.1| RING/FYVE/PHD zinc finger superfamily protein, pu... 58 1e-06 ref|XP_002300454.1| PHD finger family protein [Populus trichocar... 57 2e-06 ref|XP_002331305.1| predicted protein [Populus trichocarpa] gi|5... 56 4e-06 gb|EXB74713.1| Protein Jade-1 [Morus notabilis] 55 7e-06 >gb|EOY13548.1| RING/FYVE/PHD zinc finger superfamily protein, putative [Theobroma cacao] Length = 413 Score = 57.8 bits (138), Expect = 1e-06 Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 6/76 (7%) Frame = +3 Query: 18 MDSKIQSLPPLKRFRLLHQQH-ESNEFSPSQ-----LPAKKRRESRDXXXXXXXXXXXXX 179 MD + Q+LPP+KRFRL+ QQ+ E EF+ S+ LPAKKR+ESRD Sbjct: 1 MDIRFQALPPVKRFRLMQQQNQEEEEFNSSKASSFCLPAKKRKESRD----------PPV 50 Query: 180 STAVMPLLPAKKRVWA 227 + LPAKKR+WA Sbjct: 51 AETTTYCLPAKKRIWA 66 >ref|XP_002300454.1| PHD finger family protein [Populus trichocarpa] gi|222847712|gb|EEE85259.1| PHD finger family protein [Populus trichocarpa] Length = 347 Score = 57.4 bits (137), Expect = 2e-06 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Frame = +3 Query: 18 MDSKIQSLPPLKRFRLLHQ-QHESNEFSP--SQLPAKKRRESRDXXXXXXXXXXXXXSTA 188 MD+K Q+LPPLKR RLL Q Q E+ E P QLPAKKR+ESR+ +T Sbjct: 1 MDTKFQALPPLKRHRLLQQHQQENKENVPIALQLPAKKRKESRN---PLLADAAPQVTTT 57 Query: 189 VMPLLPAKKRVWA 227 LP KKRVWA Sbjct: 58 AAYCLPTKKRVWA 70 >ref|XP_002331305.1| predicted protein [Populus trichocarpa] gi|566194772|ref|XP_002316962.2| PHD finger family protein [Populus trichocarpa] gi|550328090|gb|EEE97574.2| PHD finger family protein [Populus trichocarpa] Length = 329 Score = 56.2 bits (134), Expect = 4e-06 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Frame = +3 Query: 18 MDSKIQSLPPLKRFRLLHQQ----HESNEFSPSQLPAKKRRESRDXXXXXXXXXXXXXST 185 MD+K Q+LPP KR LL QQ +E N SQLPAKKR+ESR+ +T Sbjct: 1 MDTKFQALPPFKRHTLLEQQQQQENEENVPFSSQLPAKKRKESRN---PLLADADPKGTT 57 Query: 186 AVMPLLPAKKRVWA 227 + LP KKRVWA Sbjct: 58 SAAYCLPTKKRVWA 71 >gb|EXB74713.1| Protein Jade-1 [Morus notabilis] Length = 334 Score = 55.5 bits (132), Expect = 7e-06 Identities = 34/70 (48%), Positives = 37/70 (52%) Frame = +3 Query: 18 MDSKIQSLPPLKRFRLLHQQHESNEFSPSQLPAKKRRESRDXXXXXXXXXXXXXSTAVMP 197 MD K LPP KR RL+HQQ + F S LPAKKR E+RD S Sbjct: 1 MDPKFNGLPPHKRLRLIHQQEQQPSF--SCLPAKKRTETRDPPALPDPKTEAIGSYC--- 55 Query: 198 LLPAKKRVWA 227 LPAKKRVWA Sbjct: 56 -LPAKKRVWA 64