BLASTX nr result
ID: Rheum21_contig00037311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037311
(275 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001777110.1| predicted protein [Physcomitrella patens] gi... 105 5e-21
gb|EPS70933.1| tubulin alpha-6 chain, partial [Genlisea aurea] 103 2e-20
ref|NP_001105588.1| tubulin alpha-6 chain [Zea mays] gi|464846|s... 102 5e-20
ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group] g... 102 5e-20
ref|NP_197478.1| tubulin alpha-3 [Arabidopsis thaliana] gi|15241... 102 5e-20
ref|XP_006657877.1| PREDICTED: tubulin alpha-3 chain-like [Oryza... 102 5e-20
ref|XP_006584595.1| PREDICTED: uncharacterized protein LOC100806... 102 5e-20
ref|XP_006579487.1| PREDICTED: tubulin A isoform X1 [Glycine max] 102 5e-20
gb|ESW31427.1| hypothetical protein PHAVU_002G237400g [Phaseolus... 102 5e-20
ref|XP_006858944.1| hypothetical protein AMTR_s00068p00090790 [A... 102 5e-20
gb|AGV54500.1| tubulin A [Phaseolus vulgaris] 102 5e-20
ref|XP_004958110.1| PREDICTED: tubulin alpha-3 chain-like [Setar... 102 5e-20
ref|XP_004504311.1| PREDICTED: tubulin alpha-3 chain-like [Cicer... 102 5e-20
ref|XP_006286795.1| hypothetical protein CARUB_v10003470mg [Caps... 102 5e-20
ref|XP_006286664.1| hypothetical protein CARUB_v10002583mg [Caps... 102 5e-20
ref|XP_004295008.1| PREDICTED: tubulin alpha-1 chain-like [Fraga... 102 5e-20
gb|EMJ06388.1| hypothetical protein PRUPE_ppa005642mg [Prunus pe... 102 5e-20
ref|XP_004149645.1| PREDICTED: tubulin alpha-3 chain-like [Cucum... 102 5e-20
gb|AGD80034.1| alpha-tubulin 1 [Hevea brasiliensis] 102 5e-20
ref|NP_001275086.1| uncharacterized LOC102577521 [Solanum tubero... 102 5e-20
>ref|XP_001777110.1| predicted protein [Physcomitrella patens]
gi|162671553|gb|EDQ58103.1| predicted protein
[Physcomitrella patens]
Length = 344
Score = 105 bits (263), Expect = 5e-21
Identities = 54/75 (72%), Positives = 55/75 (73%)
Frame = +2
Query: 50 LQFAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKS 229
+ FAVGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKS
Sbjct: 1 MDFAVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 60
Query: 230 KLGFTTYPSPQVSTA 274
KLGFT YPSPQVSTA
Sbjct: 61 KLGFTIYPSPQVSTA 75
>gb|EPS70933.1| tubulin alpha-6 chain, partial [Genlisea aurea]
Length = 269
Score = 103 bits (257), Expect = 2e-20
Identities = 52/73 (71%), Positives = 54/73 (73%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD+CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDQCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|NP_001105588.1| tubulin alpha-6 chain [Zea mays] gi|464846|sp|P33627.1|TBA6_MAIZE
RecName: Full=Tubulin alpha-6 chain; AltName:
Full=Alpha-6-tubulin gi|22158|emb|CAA44863.1|
alpha-tubulin #6 [Zea mays] gi|224033451|gb|ACN35801.1|
unknown [Zea mays] gi|380841319|gb|AFE82989.1| tubulin
alpha-5 [Saccharum hybrid cultivar]
gi|414887268|tpg|DAA63282.1| TPA: alpha tubulin6 [Zea
mays]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group]
gi|135399|sp|P28752.1|TBA1_ORYSJ RecName: Full=Tubulin
alpha-1 chain gi|20379|emb|CAA77988.1| alpha 1 tubulin
[Oryza sativa Japonica Group] gi|1136124|emb|CAA62918.1|
alfa-tubulin [Oryza sativa Japonica Group]
gi|34393570|dbj|BAC83168.1| Tubulin alpha-1 chain [Oryza
sativa Japonica Group] gi|50509129|dbj|BAD30236.1|
Tubulin alpha-1 chain [Oryza sativa Japonica Group]
gi|110617750|gb|ABG78594.1| alpha-tubulin [Oryza sativa
Japonica Group] gi|113611611|dbj|BAF21989.1|
Os07g0574800 [Oryza sativa Japonica Group]
gi|125558900|gb|EAZ04436.1| hypothetical protein
OsI_26583 [Oryza sativa Indica Group]
gi|125600815|gb|EAZ40391.1| hypothetical protein
OsJ_24840 [Oryza sativa Japonica Group]
gi|215695370|dbj|BAG90561.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215697286|dbj|BAG91280.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740861|dbj|BAG97017.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|461488123|gb|AGH17548.1| alpha tubulin [Oryza sativa]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|NP_197478.1| tubulin alpha-3 [Arabidopsis thaliana] gi|15241179|ref|NP_197479.1|
tubulin alpha-5 [Arabidopsis thaliana]
gi|297808045|ref|XP_002871906.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|297812159|ref|XP_002873963.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|567175789|ref|XP_006400538.1| hypothetical protein
EUTSA_v10013521mg [Eutrema salsugineum]
gi|567175793|ref|XP_006400540.1| hypothetical protein
EUTSA_v10013523mg [Eutrema salsugineum]
gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName:
Full=Tubulin alpha-3 chain
gi|408407918|sp|B9DHQ0.2|TBA5_ARATH RecName:
Full=Tubulin alpha-5 chain
gi|13605805|gb|AAK32888.1|AF367301_1
AT5g19770/T29J13_190 [Arabidopsis thaliana]
gi|166912|gb|AAA32888.1| alpha-tubulin [Arabidopsis
thaliana] gi|166918|gb|AAA32891.1| alpha-5 tubulin
[Arabidopsis thaliana] gi|14532776|gb|AAK64169.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
alpha-5 chain [Arabidopsis thaliana]
gi|23397154|gb|AAN31860.1| putative tubulin alpha-5
chain [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
[Arabidopsis thaliana] gi|24899739|gb|AAN65084.1|
unknown protein [Arabidopsis thaliana]
gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1|
tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata]
gi|332005364|gb|AED92747.1| tubulin alpha-3 [Arabidopsis
thaliana] gi|332005365|gb|AED92748.1| tubulin alpha-5
[Arabidopsis thaliana] gi|557101628|gb|ESQ41991.1|
hypothetical protein EUTSA_v10013521mg [Eutrema
salsugineum] gi|557101630|gb|ESQ41993.1| hypothetical
protein EUTSA_v10013523mg [Eutrema salsugineum]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_006657877.1| PREDICTED: tubulin alpha-3 chain-like [Oryza brachyantha]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_006584595.1| PREDICTED: uncharacterized protein LOC100806907 isoform X1 [Glycine
max]
Length = 423
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_006579487.1| PREDICTED: tubulin A isoform X1 [Glycine max]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>gb|ESW31427.1| hypothetical protein PHAVU_002G237400g [Phaseolus vulgaris]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_006858944.1| hypothetical protein AMTR_s00068p00090790 [Amborella trichopoda]
gi|548863056|gb|ERN20411.1| hypothetical protein
AMTR_s00068p00090790 [Amborella trichopoda]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>gb|AGV54500.1| tubulin A [Phaseolus vulgaris]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_004958110.1| PREDICTED: tubulin alpha-3 chain-like [Setaria italica]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_004504311.1| PREDICTED: tubulin alpha-3 chain-like [Cicer arietinum]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_006286795.1| hypothetical protein CARUB_v10003470mg [Capsella rubella]
gi|482555501|gb|EOA19693.1| hypothetical protein
CARUB_v10003470mg [Capsella rubella]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_006286664.1| hypothetical protein CARUB_v10002583mg [Capsella rubella]
gi|482555370|gb|EOA19562.1| hypothetical protein
CARUB_v10002583mg [Capsella rubella]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_004295008.1| PREDICTED: tubulin alpha-1 chain-like [Fragaria vesca subsp. vesca]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>gb|EMJ06388.1| hypothetical protein PRUPE_ppa005642mg [Prunus persica]
Length = 450
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|XP_004149645.1| PREDICTED: tubulin alpha-3 chain-like [Cucumis sativus]
gi|449515790|ref|XP_004164931.1| PREDICTED: tubulin
alpha-3 chain-like [Cucumis sativus]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>gb|AGD80034.1| alpha-tubulin 1 [Hevea brasiliensis]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180
>ref|NP_001275086.1| uncharacterized LOC102577521 [Solanum tuberosum]
gi|83283967|gb|ABC01891.1| tubulin alpha-5 chain-like
protein [Solanum tuberosum]
Length = 449
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 53/73 (72%)
Frame = +2
Query: 56 FAVGKEIVDRCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKL 235
+ VGKEIVD CLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 236 GFTTYPSPQVSTA 274
GFT YPSPQVSTA
Sbjct: 168 GFTIYPSPQVSTA 180