BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00037249
         (280 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          117   1e-24
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              115   8e-24
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              115   8e-24
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              115   8e-24
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              115   8e-24
gb|AFB73912.1| polyprotein [Citrus sinensis]                          114   1e-23
gb|AFB73911.1| polyprotein [Citrus sinensis]                          114   2e-23
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  111   1e-22
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo...   110   2e-22
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   108   7e-22
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   108   1e-21
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   108   1e-21
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   107   2e-21
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        106   3e-21
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   106   3e-21
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         106   3e-21
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         106   4e-21
emb|CAN78464.1| hypothetical protein VITISV_025101 [Vitis vinifera]   106   4e-21
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           106   4e-21
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   105   6e-21

>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  117 bits (294), Expect = 1e-24
 Identities = 51/93 (54%), Positives = 72/93 (77%)
 Frame = +1

Query: 1   GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
           G ++SW S LQ TI+LSTTEAE++ ATE VKEAIWL GL+ +LG  Q+ + VFCD+QS +
Sbjct: 170 GGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAI 229

Query: 181 HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
            L K+  YH +TKHIDVK+H+VR+++  G +++
Sbjct: 230 FLAKNQTYHARTKHIDVKYHYVREIIEGGDVLL 262


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (287), Expect = 8e-24
 Identities = 49/91 (53%), Positives = 70/91 (76%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW S LQ  ++LSTTEAE++ AT+  KEAIW+  L+ ELG KQ+Q+ V+CDSQS +
Sbjct: 1179 GGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSAL 1238

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            H+ ++  +H +TKHI V++HFVR+VV EG +
Sbjct: 1239 HIARNPAFHSRTKHIGVQYHFVREVVEEGSV 1269


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (287), Expect = 8e-24
 Identities = 49/91 (53%), Positives = 70/91 (76%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW S LQ  ++LSTTEAE++ AT+  KEAIW+  L+ ELG KQ+Q+ V+CDSQS +
Sbjct: 1179 GGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSAL 1238

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            H+ ++  +H +TKHI V++HFVR+VV EG +
Sbjct: 1239 HIARNPAFHSRTKHIGVQYHFVREVVEEGSV 1269


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (287), Expect = 8e-24
 Identities = 49/91 (53%), Positives = 70/91 (76%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW S LQ  ++LSTTEAE++ AT+  KEAIW+  L+ ELG KQ+Q+ V+CDSQS +
Sbjct: 1179 GGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSAL 1238

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            H+ ++  +H +TKHI V++HFVR+VV EG +
Sbjct: 1239 HIARNPAFHSRTKHIGVQYHFVREVVEEGSV 1269


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (287), Expect = 8e-24
 Identities = 49/91 (53%), Positives = 70/91 (76%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW S LQ  ++LSTTEAE++ AT+  KEAIW+  L+ ELG KQ+Q+ V+CDSQS +
Sbjct: 1179 GGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSAL 1238

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            H+ ++  +H +TKHI V++HFVR+VV EG +
Sbjct: 1239 HIARNPAFHSRTKHIGVQYHFVREVVEEGSV 1269


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  114 bits (285), Expect = 1e-23
 Identities = 49/91 (53%), Positives = 71/91 (78%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G+A+SW S LQ  ++LSTTEAE++ AT+  KEAIW+  L+ ELG KQQ++ VFCDSQS +
Sbjct: 1183 GAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSAL 1242

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            H+ ++  +H +TKHI V++HFVR+VV +G +
Sbjct: 1243 HIARNPAFHSRTKHIGVQYHFVREVVEDGSV 1273


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  114 bits (284), Expect = 2e-23
 Identities = 48/91 (52%), Positives = 72/91 (79%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G+A+SW S LQ  ++LSTTEAE++ AT+  K+AIW+  L+ ELG KQQ+++VFCDSQS +
Sbjct: 1183 GAAVSWVSKLQTVVALSTTEAEYMAATQACKKAIWIQRLLEELGHKQQKILVFCDSQSAL 1242

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            H+ ++  +H +TKHI V++HFVR+VV +G +
Sbjct: 1243 HIARNPAFHSRTKHIGVQYHFVREVVEDGSV 1273


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/91 (52%), Positives = 68/91 (74%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW S LQ  ++LSTTEAE++ AT+  KEAIW   L+ ELG KQQ++ V+CDS S +
Sbjct: 1179 GGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSAL 1238

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            H+ ++  +H +TKHI V++HFVR+VV EG +
Sbjct: 1239 HIARNPAFHSRTKHIGVQYHFVREVVEEGSV 1269


>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 1822

 Score =  110 bits (275), Expect = 2e-22
 Identities = 47/91 (51%), Positives = 70/91 (76%)
 Frame = +1

Query: 1   GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
           G  +SW + LQ  ++LSTTEAE++ ATEGVKEA+WL GL+ ELG  Q ++ VFCD+QS++
Sbjct: 554 GCTVSWKAQLQLVVALSTTEAEYIAATEGVKEAMWLKGLIGELGIVQDEVEVFCDNQSSI 613

Query: 181 HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKI 273
            LTK+  ++ +TKHID+K HF+R +++ G +
Sbjct: 614 LLTKNQMFYDRTKHIDIKLHFIRDIISRGTV 644


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  108 bits (270), Expect = 7e-22
 Identities = 46/93 (49%), Positives = 72/93 (77%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G+ ISW S LQ  ++ STTE+E++  TE VKEAIWL GL+ + G +Q+ + +FCDSQS +
Sbjct: 1230 GNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAI 1289

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
             L+K++ +H +TKHIDVK+HF+R+++++G + V
Sbjct: 1290 ALSKNNVHHERTKHIDVKYHFIREIISDGTVEV 1322


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  108 bits (269), Expect = 1e-21
 Identities = 49/93 (52%), Positives = 69/93 (74%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G+ ISW S LQ  ++LSTTEAE++   E VKEAIWL GL  E+G +Q  + V CDSQS +
Sbjct: 1216 GNTISWKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAI 1275

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
             L+K+S +H +TKHIDV++HF+R+ + +G+I V
Sbjct: 1276 ALSKNSVHHERTKHIDVRYHFIREKIADGEIQV 1308


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  108 bits (269), Expect = 1e-21
 Identities = 49/93 (52%), Positives = 70/93 (75%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G AISW S LQ  ++LSTTEAE++ ATE  KE IWL   + ELG  Q++ VV+CDSQS +
Sbjct: 1202 GGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAI 1261

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
             L+K+S YH +TKHIDV++H++R++V++  + V
Sbjct: 1262 DLSKNSMYHARTKHIDVRYHWIREMVDDESLKV 1294


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/93 (50%), Positives = 69/93 (74%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW ++LQ  ++LSTTEAE++  TE VKEAIWL G+  EL   + ++VV+CD+QS +
Sbjct: 1082 GGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAI 1141

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
            HL K+  +H ++KHIDV+ HFVR ++  G+I V
Sbjct: 1142 HLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGV 1174


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/93 (52%), Positives = 66/93 (70%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW +SLQ T++LSTTEAE++  +E  KEAIWL GL  EL      + +FCDSQS +
Sbjct: 1056 GCAVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAI 1115

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
             LTK   +H +TKHIDV++HF+R V+ EG + V
Sbjct: 1116 CLTKDQMFHERTKHIDVRYHFIRGVIAEGDVKV 1148


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  106 bits (265), Expect = 3e-21
 Identities = 45/88 (51%), Positives = 67/88 (76%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW S LQ  ++LSTTEAE++ A E  KE +W+   + ELG KQQ+ VV+CD+QS +
Sbjct: 1173 GGAVSWQSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAI 1232

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNE 264
            HL+K+S YH ++KHIDV++H++R  +N+
Sbjct: 1233 HLSKNSTYHARSKHIDVRYHWMRDALND 1260


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  106 bits (265), Expect = 3e-21
 Identities = 46/93 (49%), Positives = 70/93 (75%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G+ ISW S LQ  ++ S+TE E++  TE VKEAIWL GL+ + G +Q+ + +FCDSQS +
Sbjct: 1237 GNTISWKSGLQRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAI 1296

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
             L+K++ +H +TKHIDVK HF+R+++ +GK+ V
Sbjct: 1297 ALSKNNVHHERTKHIDVKFHFIREIIADGKVEV 1329


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  106 bits (264), Expect = 4e-21
 Identities = 47/93 (50%), Positives = 67/93 (72%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW +SLQ T++LSTTEAE++  +E  KEA+WL GL  EL      + +FCDSQS +
Sbjct: 819  GCAVSWKASLQATVALSTTEAEYMAISEACKEALWLRGLYTELCGVTSCINIFCDSQSAI 878

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
            +LT+   +H +TKHIDV++HF+R V+ EG + V
Sbjct: 879  YLTEDQMFHERTKHIDVRYHFIRGVIAEGDVKV 911


>emb|CAN78464.1| hypothetical protein VITISV_025101 [Vitis vinifera]
          Length = 997

 Score =  106 bits (264), Expect = 4e-21
 Identities = 50/93 (53%), Positives = 71/93 (76%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G+AISW S+LQ  ++LSTTEAE++ ATE  KE IWLHG ++ELG KQ+  ++  DSQS +
Sbjct: 872  GTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAI 931

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
             LTK+S +H K+KHI  K+HF+R +V E K+++
Sbjct: 932  FLTKNSAFHSKSKHIQTKYHFIRYLV-EDKLVI 963


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  106 bits (264), Expect = 4e-21
 Identities = 47/93 (50%), Positives = 67/93 (72%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW +SLQ T++LSTTEAE++  +E  KEA+WL GL  EL      + +FCDSQS +
Sbjct: 819  GCAVSWKASLQATVALSTTEAEYMAISEACKEALWLRGLYTELCGVTSCINIFCDSQSAI 878

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
            +LT+   +H +TKHIDV++HF+R V+ EG + V
Sbjct: 879  YLTEDQMFHERTKHIDVRYHFIRGVIAEGDVKV 911


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score =  105 bits (262), Expect = 6e-21
 Identities = 47/93 (50%), Positives = 65/93 (69%)
 Frame = +1

Query: 1    GSAISWYSSLQPTISLSTTEAEHLVATEGVKEAIWLHGLVNELGAKQQQLVVFCDSQSTV 180
            G A+SW ++LQ T++LSTTEAE++  +E  KE IWL GL  EL      + +FCDSQS +
Sbjct: 1013 GCAVSWKANLQATVALSTTEAEYMAISEACKETIWLRGLYTELCGVTSCINIFCDSQSAI 1072

Query: 181  HLTKSSKYHFKTKHIDVKHHFVRKVVNEGKIMV 279
             LTK   +H +TKHIDV++HF+R V+ EG + V
Sbjct: 1073 CLTKDQMFHERTKHIDVRYHFIRSVITEGDVKV 1105