BLASTX nr result
ID: Rheum21_contig00037248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037248
(337 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 149 5e-34
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 146 3e-33
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 145 5e-33
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 145 5e-33
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 145 7e-33
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 144 9e-33
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 143 2e-32
gb|ABG22123.1| polyprotein [Prunus avium] 143 2e-32
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 142 4e-32
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 142 4e-32
emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera] 142 5e-32
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 142 5e-32
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera] 141 8e-32
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera] 141 8e-32
emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera] 141 8e-32
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 141 8e-32
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 141 1e-31
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 141 1e-31
emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera] 141 1e-31
gb|ABG22121.1| polyprotein [Solanum melongena] 141 1e-31
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 149 bits (375), Expect = 5e-34
Identities = 69/108 (63%), Positives = 90/108 (83%)
Frame = +1
Query: 10 IKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQST 189
I++MS VPYSSAVGSLMYAMVC RPDL+ A+SVV+RYM N GKE W+AV+WI RYL+ ++
Sbjct: 1080 IEYMSRVPYSSAVGSLMYAMVCCRPDLSHALSVVNRYMANPGKEHWKAVQWIFRYLRGTS 1139
Query: 190 NTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F++SR G++GYVD+DFA DLD+RRSI+ Y+FT+GG A+SW
Sbjct: 1140 SACLQFERSRD---GLVGYVDSDFAGDLDRRRSITGYVFTIGGCAVSW 1184
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 146 bits (368), Expect = 3e-33
Identities = 68/108 (62%), Positives = 89/108 (82%)
Frame = +1
Query: 10 IKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQST 189
I++MS VPYSSAVGSLMYAMVC+RPDL+ A+SVVSRYM N GKE W+AV+WI RYL+ ++
Sbjct: 1315 IEYMSRVPYSSAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTS 1374
Query: 190 NTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F +SR G++GYVD+DFA DLD+ RS++ Y+FT+GG A+SW
Sbjct: 1375 SACLQFGRSRD---GLVGYVDSDFAGDLDRGRSLAGYVFTIGGCAVSW 1419
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 145 bits (366), Expect = 5e-33
Identities = 68/108 (62%), Positives = 88/108 (81%)
Frame = +1
Query: 10 IKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQST 189
I++MS VPYSS VGSLMYAMVC+RPDL+ A+SVVSRYM N GKE W+AV+WI RYL ++
Sbjct: 914 IEYMSRVPYSSVVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLCGTS 973
Query: 190 NTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F +SR G++GYVD+DFA DLD+RRS++ Y+FT+GG A+SW
Sbjct: 974 SACLQFGRSRD---GLVGYVDSDFAGDLDRRRSLAGYVFTIGGCAVSW 1018
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 145 bits (366), Expect = 5e-33
Identities = 67/109 (61%), Positives = 89/109 (81%)
Frame = +1
Query: 7 SIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQS 186
+I++MS VPYSSAVGSLMYAM+C+RPDL+ A+SVVSRYM N GKE W+ V+WI RYL +
Sbjct: 956 NIEYMSRVPYSSAVGSLMYAMICSRPDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHGT 1015
Query: 187 TNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
++ L F +SR G++GYVD+DFA DLD+RRS++ Y+FT+GG A+SW
Sbjct: 1016 SSACLQFGRSRD---GLVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSW 1061
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 145 bits (365), Expect = 7e-33
Identities = 66/110 (60%), Positives = 89/110 (80%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E +++MS VPYSSAVGSLMYAMVC+RPDL+ A+S+VSRYM N GKE W+A+ WI RYL+
Sbjct: 67 EDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYLRG 126
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+T+ L F ++ G++GYVD+DFAADLD+RRS++ Y+FT+G A+SW
Sbjct: 127 TTDACLKFGRTDK---GLVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSW 173
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 144 bits (364), Expect = 9e-33
Identities = 68/111 (61%), Positives = 89/111 (80%)
Frame = +1
Query: 1 AESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLK 180
A I++MS VPYSSAV SLMYAMVC+RPDL+ A+SVVSRYM N GKE W+AV+WI RYL+
Sbjct: 1014 AYDIEYMSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLR 1073
Query: 181 QSTNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+++ L F +S G++GYVD+DFA DLD+RRS++ Y+FT+GG A+SW
Sbjct: 1074 GTSSACLQFGRSSD---GLVGYVDSDFAGDLDRRRSLTGYVFTVGGCAVSW 1121
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 143 bits (361), Expect = 2e-32
Identities = 67/110 (60%), Positives = 88/110 (80%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E +++MS VPYSSAVGSLMYAMVC+RPDL+ A+S+VSRYM N GKE W+AV+WI RYLK
Sbjct: 946 EDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLKG 1005
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F ++ G++GYVD+DFAADLD+RRS++ Y+FT+G A+SW
Sbjct: 1006 IADACLKFGRTDK---GLVGYVDSDFAADLDKRRSLTGYVFTIGSCAMSW 1052
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 143 bits (361), Expect = 2e-32
Identities = 62/110 (56%), Positives = 85/110 (77%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E +M+ +PY+SAVGSLMYAMVCTRPD++QAVS+VSRYMHN GK W+AVKWILRY+
Sbjct: 95 EESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILG 154
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ + L+F + + V+GYVD+D+A DLD+RRS + ++FT+ G +SW
Sbjct: 155 TVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSW 204
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 142 bits (359), Expect = 4e-32
Identities = 67/108 (62%), Positives = 88/108 (81%)
Frame = +1
Query: 10 IKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQST 189
I++MS VPYSSAVGSLMYAMVC+RPDL+ A+S+VSRYM N GKE W AV+WI RYL+ +T
Sbjct: 1109 IEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTT 1168
Query: 190 NTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F ++ G+IGYVD+D+AADLD+RRS++ Y+FT+G A+SW
Sbjct: 1169 YSCLKFGRTDK---GLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSW 1213
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 142 bits (359), Expect = 4e-32
Identities = 67/108 (62%), Positives = 88/108 (81%)
Frame = +1
Query: 10 IKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQST 189
I++MS VPYSSAVGSLMYAMVC+RPDL+ A+S+VSRYM N GKE W AV+WI RYL+ +T
Sbjct: 1109 IEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTT 1168
Query: 190 NTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F ++ G+IGYVD+D+AADLD+RRS++ Y+FT+G A+SW
Sbjct: 1169 YSCLKFGRTDK---GLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSW 1213
>emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera]
Length = 1137
Score = 142 bits (358), Expect = 5e-32
Identities = 69/110 (62%), Positives = 83/110 (75%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E HMS VPY+SA+GSLMYAMVCTRPD+A AV VVSR+M GK+ WEAVKWILRYLK
Sbjct: 911 EERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKG 970
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
S +T L F + + GYVDADFA D+D R+S + ++FTLGG+AISW
Sbjct: 971 SLDTCLCFTGASLK---LXGYVDADFAGDIDSRKSTTGFVFTLGGTAISW 1017
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 142 bits (358), Expect = 5e-32
Identities = 65/110 (59%), Positives = 87/110 (79%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E +++MS VPYSS VGSLMYAMVC+R DL+ A+S+VSRYM N GKE W+A++WI RYL+
Sbjct: 949 EDVEYMSRVPYSSVVGSLMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAIQWIFRYLRD 1008
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ N L F ++ G+IGYVD+DFAADLD+RRS++ Y+FT+G A+SW
Sbjct: 1009 TANACLKFGRTNK---GLIGYVDSDFAADLDKRRSLTGYVFTIGSCAVSW 1055
>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
Length = 1279
Score = 141 bits (356), Expect = 8e-32
Identities = 69/110 (62%), Positives = 83/110 (75%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E HMS VPY+SA+GSLMYAMVCTRPD+A AV VVSR+M GK+ WEAVKWILRYLK
Sbjct: 1053 EERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKG 1112
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
S +T L F + + GYVDADFA D+D R+S + ++FTLGG+AISW
Sbjct: 1113 SLDTCLCFTGASLK---LQGYVDADFAGDIDSRKSTTGFVFTLGGTAISW 1159
>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 141 bits (356), Expect = 8e-32
Identities = 69/110 (62%), Positives = 83/110 (75%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E HMS VPY+SA+GSLMYAMVCTRPD+A AV VVSR+M GK+ WEAVKWILRYLK
Sbjct: 996 EERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKG 1055
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
S +T L F + + GYVDADFA D+D R+S + ++FTLGG+AISW
Sbjct: 1056 SLDTCLCFTGASLK---LQGYVDADFAGDIDSRKSTTGFVFTLGGTAISW 1102
>emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
Length = 1269
Score = 141 bits (356), Expect = 8e-32
Identities = 68/110 (61%), Positives = 84/110 (76%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
+ + HMS VPY+SA+GSLMYAMVCTRPD+A AV VVSR+M GK+ WEAVKWILRYLK
Sbjct: 1043 KEMDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKG 1102
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
S +T L F + + GYVDADFA D+D R+S + ++FTLGG+AISW
Sbjct: 1103 SLDTCLCFTGASLK---LQGYVDADFAGDIDSRKSTTGFVFTLGGTAISW 1149
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 141 bits (356), Expect = 8e-32
Identities = 66/108 (61%), Positives = 88/108 (81%)
Frame = +1
Query: 10 IKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQST 189
I++MS VPYSSAVGSLMYAMVC+RPDL+ A+S+VSRYM N GKE W A++WI RYL+ +T
Sbjct: 1111 IEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTT 1170
Query: 190 NTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F ++ G+IGYVD+D+AADLD+RRS++ Y+FT+G A+SW
Sbjct: 1171 YSCLKFGRTDK---GLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSW 1215
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 141 bits (355), Expect = 1e-31
Identities = 66/108 (61%), Positives = 87/108 (80%)
Frame = +1
Query: 10 IKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQST 189
I++MS VPYSSAVGSLMYAMVC+RPDL+ A+S+VSRYM N GKE W V+WI RYL+ +T
Sbjct: 1109 IEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTT 1168
Query: 190 NTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ L F ++ G+IGYVD+D+AADLD+RRS++ Y+FT+G A+SW
Sbjct: 1169 YSCLKFGRTDK---GLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSW 1213
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 141 bits (355), Expect = 1e-31
Identities = 65/110 (59%), Positives = 88/110 (80%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E +++MS VPYSSAVGSLMYAMVC+RPDL+ A+S+VSRYM N GKE W+AV+WI RYL+
Sbjct: 779 EDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRG 838
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ + L F ++ G++GYVD+DFAADLD+RRS++ Y+FT+ A+SW
Sbjct: 839 TADACLKFGRTDK---GLVGYVDSDFAADLDKRRSLTGYVFTISSCAMSW 885
>emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]
Length = 1299
Score = 141 bits (355), Expect = 1e-31
Identities = 69/110 (62%), Positives = 83/110 (75%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E HMS VPY+SA+GSLMYAMVCTRPD+A AV VVSR+M GK+ WEAVKWILRYLK
Sbjct: 1073 EERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKG 1132
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
S +T L F + + GYVDADFA D+D R+S + ++FTLGG+AISW
Sbjct: 1133 SLDTCLCFTGASLK---LQGYVDADFAGDIDSRKSTTEFVFTLGGTAISW 1179
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 141 bits (355), Expect = 1e-31
Identities = 63/110 (57%), Positives = 86/110 (78%)
Frame = +1
Query: 4 ESIKHMSSVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMHNSGKERWEAVKWILRYLKQ 183
E ++M+ VPY++AVGSLMYAMVCTR D++QAVSVVSRYMH+ GK W+AVKWILRY+K
Sbjct: 180 EEREYMAKVPYANAVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKN 239
Query: 184 STNTSLIFDKSRSDPGGVIGYVDADFAADLDQRRSISAYIFTLGGSAISW 333
+ + L+F++ +S V+GY D+D+A DLD+RRS + Y+FTL +SW
Sbjct: 240 TVDIGLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSW 289