BLASTX nr result
ID: Rheum21_contig00037191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037191
(461 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512122.1| pentatricopeptide repeat-containing protein,... 91 2e-16
ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat... 83 4e-14
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera] 83 4e-14
ref|XP_006391028.1| hypothetical protein EUTSA_v10019580mg [Eutr... 81 1e-13
ref|NP_564961.1| pentatricopeptide repeat-containing protein [Ar... 81 1e-13
ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citr... 81 2e-13
ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arab... 81 2e-13
gb|EMJ25777.1| hypothetical protein PRUPE_ppa1027222mg [Prunus p... 80 3e-13
gb|EOY01787.1| Pentatricopeptide repeat-containing protein, puta... 80 4e-13
ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat... 78 1e-12
ref|XP_004239080.1| PREDICTED: putative pentatricopeptide repeat... 77 2e-12
ref|XP_004490134.1| PREDICTED: putative pentatricopeptide repeat... 76 4e-12
ref|XP_006301926.1| hypothetical protein CARUB_v10022402mg [Caps... 76 4e-12
gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis] 76 5e-12
ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat... 75 9e-12
ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago ... 73 3e-11
gb|ESW29424.1| hypothetical protein PHAVU_002G069500g [Phaseolus... 72 8e-11
ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 71 2e-10
ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
ref|XP_002312273.1| pentatricopeptide repeat-containing family p... 70 2e-10
>ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549302|gb|EEF50791.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 800
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/83 (51%), Positives = 65/83 (78%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQR+D+IR+IE+DL+++ + D+GYYTLLSNI+AE +WD S+++RS M +GLKKVPGYS
Sbjct: 683 HQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYS 742
Query: 279 TIKN*HLLMLIQLIQFSAGEMFH 211
TI+ + ++ +F AG++ H
Sbjct: 743 TIE-----LDKKVYRFGAGDVSH 760
>ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/86 (47%), Positives = 64/86 (74%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H+RID+I+SIE++L+++ + D+GYYTLLSNI+AE WD+ ++RS+M S GL+KVPGYS
Sbjct: 685 HKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYS 744
Query: 279 TIKN*HLLMLIQLIQFSAGEMFH*RT 202
TI+ + ++ +F G+ H +T
Sbjct: 745 TIE-----IDKKIYRFGPGDTSHSQT 765
>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/86 (47%), Positives = 64/86 (74%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H+RID+I+SIE++L+++ + D+GYYTLLSNI+AE WD+ ++RS+M S GL+KVPGYS
Sbjct: 882 HKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYS 941
Query: 279 TIKN*HLLMLIQLIQFSAGEMFH*RT 202
TI+ + ++ +F G+ H +T
Sbjct: 942 TIE-----IDKKIYRFGPGDTSHSQT 962
>ref|XP_006391028.1| hypothetical protein EUTSA_v10019580mg [Eutrema salsugineum]
gi|557087462|gb|ESQ28314.1| hypothetical protein
EUTSA_v10019580mg [Eutrema salsugineum]
Length = 787
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/80 (48%), Positives = 60/80 (75%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQR+D++++I++DL ++ + D+GYYTLLSNI+AE +W+E +R+RS M S LKKVPGYS
Sbjct: 683 HQRMDMVKAIKEDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSSSLKKVPGYS 742
Query: 279 TIKN*HLLMLIQLIQFSAGE 220
I+ + ++ +F AGE
Sbjct: 743 VIE-----IDQKVFRFGAGE 757
>ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical
protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein,
putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/80 (50%), Positives = 59/80 (73%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQ++D+I++I+ DL ++ + D+GYYTLLSNI+AE +W+E +RLRS M S LKKVPGYS
Sbjct: 685 HQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Query: 279 TIKN*HLLMLIQLIQFSAGE 220
I+ + ++ +F AGE
Sbjct: 745 AIE-----IDQKVFRFGAGE 759
>ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citrus clementina]
gi|557540978|gb|ESR52022.1| hypothetical protein
CICLE_v10033549mg [Citrus clementina]
Length = 745
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/62 (59%), Positives = 51/62 (82%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H+RIDV+++IE++L + D+GYYTLLSNI+AE +WDE ++RS+M+ GLKKVPGYS
Sbjct: 684 HKRIDVMKTIEKELSVTGTNDNGYYTLLSNIYAEEGNWDEFGKVRSIMEVTGLKKVPGYS 743
Query: 279 TI 274
TI
Sbjct: 744 TI 745
>ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata] gi|297333071|gb|EFH63489.1| hypothetical protein
ARALYDRAFT_476061 [Arabidopsis lyrata subsp. lyrata]
Length = 1347
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/80 (47%), Positives = 60/80 (75%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQ++D+I++I+ D+ ++ + D+GYYTLLSNI+AE +W+E +R+RS M S+ LKKVPGYS
Sbjct: 1243 HQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYS 1302
Query: 279 TIKN*HLLMLIQLIQFSAGE 220
I+ + ++ +F AGE
Sbjct: 1303 AIE-----IDKKVFRFGAGE 1317
>gb|EMJ25777.1| hypothetical protein PRUPE_ppa1027222mg [Prunus persica]
Length = 634
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/63 (57%), Positives = 50/63 (79%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQR+D+I+SIE DL+++ + DSGYYTL SNI+AE +WDE +R +M +GL+KVPGYS
Sbjct: 542 HQRMDMIKSIETDLLDISTDDSGYYTLFSNIYAEGGNWDEFGNVRLMMKGIGLRKVPGYS 601
Query: 279 TIK 271
I+
Sbjct: 602 IIE 604
>gb|EOY01787.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 830
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/63 (53%), Positives = 51/63 (80%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H RID+I++IE+DL+++ + D+GYYTLLSN++ E +W E ++RS M +GL+KVPGYS
Sbjct: 686 HHRIDMIKTIEKDLLDINTDDTGYYTLLSNVYGEEGNWKEFGKVRSAMKGIGLRKVPGYS 745
Query: 279 TIK 271
TI+
Sbjct: 746 TIE 748
>ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Solanum tuberosum]
gi|565405237|ref|XP_006368014.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g69350,
mitochondrial-like [Solanum tuberosum]
Length = 753
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/63 (57%), Positives = 51/63 (80%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H+R+D+I+ I+Q L N+ + D+GYYTLLSNI+AE +W+ES+ +RS M S+GLKKV GYS
Sbjct: 684 HKRMDIIKMIQQRLKNMQTDDTGYYTLLSNIYAEEGEWNESRMVRSKMRSLGLKKVDGYS 743
Query: 279 TIK 271
I+
Sbjct: 744 MIE 746
>ref|XP_004239080.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Solanum lycopersicum]
Length = 753
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/63 (55%), Positives = 51/63 (80%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H+R+D+I+ ++Q L N+ + D+GYYTLLSNI+AE +W+ES+ +RS M S+GLKKV GYS
Sbjct: 684 HKRMDIIKMMQQRLENMQTDDTGYYTLLSNIYAEEGEWNESRMVRSKMRSLGLKKVDGYS 743
Query: 279 TIK 271
I+
Sbjct: 744 MIE 746
>ref|XP_004490134.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cicer arietinum]
Length = 805
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/63 (55%), Positives = 50/63 (79%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H R+D+I +I ++L + + D+GYYTLLSNI+AE W ES+++RS M+ +GLKKVPGYS
Sbjct: 688 HGRLDLIENISEELGGIRTDDTGYYTLLSNIYAEGGKWYESRKVRSRMEGMGLKKVPGYS 747
Query: 279 TIK 271
TI+
Sbjct: 748 TIE 750
>ref|XP_006301926.1| hypothetical protein CARUB_v10022402mg [Capsella rubella]
gi|482570636|gb|EOA34824.1| hypothetical protein
CARUB_v10022402mg [Capsella rubella]
Length = 785
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/80 (46%), Positives = 57/80 (71%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H+R+D I++I+ DL ++ + D+GYYTLLSNI+ E +W+E +++RS M S LKKVPGYS
Sbjct: 685 HKRMDTIKAIKNDLSDIVTDDTGYYTLLSNIYGEEGEWEEFRKMRSAMKSSNLKKVPGYS 744
Query: 279 TIKN*HLLMLIQLIQFSAGE 220
I+ + ++ +F AGE
Sbjct: 745 AIE-----IDKKVFRFGAGE 759
>gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis]
Length = 792
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/80 (46%), Positives = 57/80 (71%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H+R+D++ SI++D+ ++ + D GYYTLLSNI+AE +WDE ++R M S+GL KVPGYS
Sbjct: 682 HRRMDMLNSIQRDISSISTDDPGYYTLLSNIYAEGGNWDEFGKVRLKMKSIGLAKVPGYS 741
Query: 279 TIKN*HLLMLIQLIQFSAGE 220
+I+ + Q +F AG+
Sbjct: 742 SIE-----LENQTYRFGAGD 756
>ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/63 (53%), Positives = 51/63 (80%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H R+D+I +I ++L + + D+GYYTLLSNI+AE +W ES+++RS M+ +GLKKVPGYS
Sbjct: 687 HGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYS 746
Query: 279 TIK 271
+I+
Sbjct: 747 SIE 749
>ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein
MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/61 (54%), Positives = 49/61 (80%)
Frame = -3
Query: 453 RIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYSTI 274
R+D+I I ++L + + D+GYYTLLSNI+AE +W ES+++RS M+ +GLKKVPGYST+
Sbjct: 690 RMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTV 749
Query: 273 K 271
+
Sbjct: 750 E 750
>gb|ESW29424.1| hypothetical protein PHAVU_002G069500g [Phaseolus vulgaris]
Length = 825
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/63 (50%), Positives = 52/63 (82%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
H R+D+I++I ++L + + D+G+YTLLSNI+AE +W ES+++RS M+ +GLKKVPG+S
Sbjct: 687 HGRMDLIKNIHKELREIRTDDTGHYTLLSNIYAEGGNWYESRKVRSRMEGLGLKKVPGFS 746
Query: 279 TIK 271
+I+
Sbjct: 747 SIE 749
>ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/63 (47%), Positives = 48/63 (76%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQR+D+ ++I+++L N+ + D+G+YTLLSNI+A +W+E +RS+M GLKKVP YS
Sbjct: 684 HQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYS 743
Query: 279 TIK 271
++
Sbjct: 744 VVE 746
>ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/63 (47%), Positives = 48/63 (76%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQR+D+ ++I+++L N+ + D+G+YTLLSNI+A +W+E +RS+M GLKKVP YS
Sbjct: 684 HQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYS 743
Query: 279 TIK 271
++
Sbjct: 744 VVE 746
>ref|XP_002312273.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852093|gb|EEE89640.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 745
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = -3
Query: 459 HQRIDVIRSIEQDLVNLPSKDSGYYTLLSNIHAEYEDWDESQRLRSVMDSVGLKKVPGYS 280
HQR+D+I IE+DL+ + + D+G+Y+LLSNI+AE +W + R +M+ G KKVPGYS
Sbjct: 684 HQRMDMIPEIEKDLLKIRTSDTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYS 743
Query: 279 TI 274
I
Sbjct: 744 AI 745