BLASTX nr result
ID: Rheum21_contig00037163
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037163
(298 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23
emb|CBI40338.3| unnamed protein product [Vitis vinifera] 113 2e-23
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] 113 2e-23
gb|EOY16969.1| Tetratricopeptide repeat (TPR)-like superfamily p... 111 9e-23
gb|EOY16968.1| Tetratricopeptide repeat (TPR)-like superfamily p... 111 9e-23
gb|EMJ05817.1| hypothetical protein PRUPE_ppa002349mg [Prunus pe... 111 1e-22
gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis] 109 3e-22
ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_004301456.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_002318314.2| hypothetical protein POPTR_0012s03810g [Popu... 103 3e-20
gb|EPS66947.1| hypothetical protein M569_07825, partial [Genlise... 101 1e-19
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
gb|ESW13450.1| hypothetical protein PHAVU_008G197200g [Phaseolus... 98 1e-18
ref|XP_002515835.1| pentatricopeptide repeat-containing protein,... 97 2e-18
ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group] g... 96 5e-18
emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group] 96 5e-18
ref|XP_006654247.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_006363979.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_004975518.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 113 bits (283), Expect = 2e-23
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
VFDEM ERGV D +SWNSIV+AY Q G A+++F RM D G RPDA SLVNVLPAC
Sbjct: 183 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG-IRPDAVSLVNVLPAC 241
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
A++ +GK++HG+A+R L +DVFVGNA+VD YAK
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAK 278
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/105 (33%), Positives = 62/105 (59%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F+++ E + + ++W+++++ YAQ G +AL++F +M CG P+ +LV++L
Sbjct: 319 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL-CGSE-PNVVTLVSLLSG 376
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CA + GKE H AI+ +L DD+ V NAL+D Y+K
Sbjct: 377 CALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 421
>emb|CBI40338.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 113 bits (283), Expect = 2e-23
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
VFDEM ERGV D +SWNSIV+AY Q G A+++F RM D G RPDA SLVNVLPAC
Sbjct: 183 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG-IRPDAVSLVNVLPAC 241
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
A++ +GK++HG+A+R L +DVFVGNA+VD YAK
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAK 278
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
VF+ M V D +SWN++V+ Y+Q GR+ DAL LF ++ + P+ +LV++L C
Sbjct: 288 VFERMK---VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNPNVVTLVSLLSGC 344
Query: 183 AALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVD 281
A + GKE H AI+ +L DD+ V NAL+D
Sbjct: 345 ALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALID 384
>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 113 bits (283), Expect = 2e-23
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
VFDEM ERGV D +SWNSIV+AY Q G A+++F RM D G RPDA SLVNVLPAC
Sbjct: 202 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG-IRPDAVSLVNVLPAC 260
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
A++ +GK++HG+A+R L +DVFVGNA+VD YAK
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAK 297
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F+++ E + + ++W+++++ YAQ G +AL++F +M CG P+ +LV++L
Sbjct: 338 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL-CGSE-PNVVTLVSLLSG 395
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CA+ + GKE H AI+ +L DD+ V NAL+D Y+K
Sbjct: 396 CASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 440
>gb|EOY16969.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
[Theobroma cacao]
Length = 850
Score = 111 bits (278), Expect = 9e-23
Identities = 59/99 (59%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMN--WDCGGHRPDAHSLVNVLP 176
VFDEM +RG+ D +SWNSIV+AY Q+ +A+ELF RM W+ PD SLVNVLP
Sbjct: 181 VFDEMCDRGICDVVSWNSIVAAYMQSRDARNAVELFRRMTCYWEI---HPDVVSLVNVLP 237
Query: 177 ACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
ACA+L S+ GK++HGFA+R L +DVFVGNALVD YAK
Sbjct: 238 ACASLAASLHGKQLHGFALRVGLFEDVFVGNALVDMYAK 276
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/105 (36%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F++M E V D ++W+++++ YAQ +AL++F +M CG +P+ +LV++L A
Sbjct: 317 LFEKMREEKVELDVVTWSAVIAGYAQRDHGNEALDVFRQMQL-CGC-KPNVVTLVSLLSA 374
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CA ++ +QGKE H +AI+ +L +D+ V N L+D YAK
Sbjct: 375 CALIEALVQGKETHCYAIKCVLNYDWNDPGEDLMVINGLIDMYAK 419
>gb|EOY16968.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 862
Score = 111 bits (278), Expect = 9e-23
Identities = 59/99 (59%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMN--WDCGGHRPDAHSLVNVLP 176
VFDEM +RG+ D +SWNSIV+AY Q+ +A+ELF RM W+ PD SLVNVLP
Sbjct: 193 VFDEMCDRGICDVVSWNSIVAAYMQSRDARNAVELFRRMTCYWEI---HPDVVSLVNVLP 249
Query: 177 ACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
ACA+L S+ GK++HGFA+R L +DVFVGNALVD YAK
Sbjct: 250 ACASLAASLHGKQLHGFALRVGLFEDVFVGNALVDMYAK 288
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/105 (36%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F++M E V D ++W+++++ YAQ +AL++F +M CG +P+ +LV++L A
Sbjct: 329 LFEKMREEKVELDVVTWSAVIAGYAQRDHGNEALDVFRQMQL-CGC-KPNVVTLVSLLSA 386
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CA ++ +QGKE H +AI+ +L +D+ V N L+D YAK
Sbjct: 387 CALIEALVQGKETHCYAIKCVLNYDWNDPGEDLMVINGLIDMYAK 431
>gb|EMJ05817.1| hypothetical protein PRUPE_ppa002349mg [Prunus persica]
Length = 683
Score = 111 bits (277), Expect = 1e-22
Identities = 59/97 (60%), Positives = 71/97 (73%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
+FDE+ ERG+ D +SWNSIVSAY Q+G +AL +F RM D RPDA SLVNVLPAC
Sbjct: 14 MFDELLERGIGDVVSWNSIVSAYVQSGDSKNALSMFDRMMGDFSV-RPDAFSLVNVLPAC 72
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
A+ M GK+IH +AIR L +DVFVGNA+VD YAK
Sbjct: 73 ASAGAPMWGKQIHSYAIRRGLFEDVFVGNAVVDMYAK 109
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 42 ISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPACAALKWSMQGKEIH 221
++W ++ YAQ+G +ALELF +M +P+A ++ L ACA L GK+IH
Sbjct: 274 VTWTVMIGGYAQHGEANEALELFYQMLRQDFPLKPNAFTISCALMACARLGALRFGKQIH 333
Query: 222 GFAIRGLLT-DDVFVGNALVDQYAK 293
F +R +FV N LVD Y+K
Sbjct: 334 AFVLRNQYDFVKLFVANCLVDMYSK 358
>gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis]
Length = 858
Score = 109 bits (273), Expect = 3e-22
Identities = 54/97 (55%), Positives = 71/97 (73%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
+F+E+ +RG+ D +SWNSIV+AY+QNG +AL +FGRM D RPDA LVNV AC
Sbjct: 189 MFEEVLKRGIGDVVSWNSIVAAYSQNGDSGNALRMFGRMMKD-RSVRPDAFGLVNVFSAC 247
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
++ M GK++HGFA+R L +DVFVGNA+VD YAK
Sbjct: 248 GSIGVLMWGKQVHGFAVRSCLHEDVFVGNAIVDMYAK 284
>ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cicer arietinum]
Length = 855
Score = 109 bits (273), Expect = 3e-22
Identities = 58/97 (59%), Positives = 67/97 (69%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
VFDEM +RGV D +SWNSIVSAY++ A+ LF M CG RPDA S+VNVLP C
Sbjct: 185 VFDEMCQRGVCDLVSWNSIVSAYSRCCVQEIAVSLFREMTVGCG-MRPDAVSVVNVLPVC 243
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
L+ GK++HGF IR L DDVFVGNALVD YAK
Sbjct: 244 GYLRLGFHGKQVHGFGIRTGLVDDVFVGNALVDMYAK 280
Score = 67.4 bits (163), Expect = 2e-09
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 41/138 (29%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMN----------W--------- 125
VF+ M G D +SWN++V+ Y+QNGR+ DA+ LFG+M W
Sbjct: 290 VFERM---GFKDVVSWNAMVTGYSQNGRFEDAVSLFGKMREEKIELDVVTWSSVVAGYAQ 346
Query: 126 ---------------DCGGHRPDAHSLVNVLPACAALKWSMQGKEIHGFAIRGLLT---- 248
DCG RP+ +L+++L ACA++ + G+E H +AI+ +L
Sbjct: 347 RGYGCEAMDVFRQMCDCGC-RPNVVTLLSLLSACASVGALLHGRETHCYAIKFILNINDD 405
Query: 249 ---DDVFVGNALVDQYAK 293
DD+ V N L+D YAK
Sbjct: 406 DYDDDLTVINGLIDMYAK 423
>ref|XP_004301456.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Fragaria vesca subsp. vesca]
Length = 850
Score = 104 bits (259), Expect = 1e-20
Identities = 56/100 (56%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
VFDEM ERGV D +SWNSI++ YAQ+G +A+E+FG M G + PDA SLVNVLP C
Sbjct: 181 VFDEMLERGVEDIVSWNSIMAVYAQSGDSGNAVEVFGLMVGGFGVN-PDAVSLVNVLPLC 239
Query: 183 AAL---KWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
A+L KW MQ IHG+ ++ L +DVFVGN+++D YAK
Sbjct: 240 ASLGEVKWGMQ---IHGYGVKSGLVEDVFVGNSVIDMYAK 276
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F++M E + + ++W+++++ YAQ G A+++F M CG P+ +LV++L
Sbjct: 317 LFEKMREEKIELNVVTWSAVIAGYAQRGHGYQAVDVFREM-MACGSE-PNVVTLVSLLSG 374
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CA+ G+E HG+AI+ +L +D+ V N L+D Y K
Sbjct: 375 CASAGALNLGRETHGYAIKWMLELEGNDPGNDMMVINGLIDMYTK 419
>ref|XP_002318314.2| hypothetical protein POPTR_0012s03810g [Populus trichocarpa]
gi|550326327|gb|EEE96534.2| hypothetical protein
POPTR_0012s03810g [Populus trichocarpa]
Length = 643
Score = 103 bits (256), Expect = 3e-20
Identities = 56/101 (55%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCG----GHRPDAHSLVNV 170
+FDEM ER VYD +SWNSIV+ Y Q G +AL LF RM C RPD SLVNV
Sbjct: 67 LFDEMCERRVYDLVSWNSIVAVYVQRGDCKNALRLFDRM---CKLGDIDMRPDVVSLVNV 123
Query: 171 LPACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
LPACA++ + GK +HG A+R +D+FVGNALVD YAK
Sbjct: 124 LPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAK 164
>gb|EPS66947.1| hypothetical protein M569_07825, partial [Genlisea aurea]
Length = 779
Score = 101 bits (251), Expect = 1e-19
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRM-NWDCGGHRPDAHSLVNVLPA 179
+FDEM GV+D +SWNSI+S Y Q G A ++F M ++ + DA SLVN+LPA
Sbjct: 108 LFDEMLMLGVFDTVSWNSIISVYVQIGECKRAFQMFQEMVSYRDADLQADAVSLVNILPA 167
Query: 180 CAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
CA+L+ GKEIHGFA+R L +D+FVGNA+VD Y+K
Sbjct: 168 CASLRSKRSGKEIHGFAMRRGLVEDMFVGNAIVDMYSK 205
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Frame = +3
Query: 6 FDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
F M E + + ++W++++S+YAQ G +AL++F M G RP++ +L++VL C
Sbjct: 247 FRSMKENNIALNVVTWSAVISSYAQRGLGNEALDVFRDMI--ASGSRPNSVTLISVLSGC 304
Query: 183 AALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
AA+ QGKE H A + L D++ V N L+D YAK
Sbjct: 305 AAVGALAQGKETHCCAFKQFLNLIGNDPGDEMMVINGLIDMYAK 348
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 42 ISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPACAALKWSMQGKEIH 221
++W ++ YAQ+G +DAL L M D P+ ++ L ACA L GKEIH
Sbjct: 370 VTWTVMIGGYAQHGDSSDALMLLSEMVSDKRRLMPNGFTISCALVACARLGALRLGKEIH 429
Query: 222 GFAIRGLLTDDV-FVGNALVDQYAK 293
G+A+R + + F+ N L+D Y K
Sbjct: 430 GYALRRRYGEAMQFISNCLIDMYTK 454
>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 101 bits (251), Expect = 1e-19
Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGH-----RPDAHSLVN 167
+FDE+ ER + D +SWNSI++AY Q G+ AL + RM G H RPDA +LVN
Sbjct: 184 MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRM----GNHYSLKLRPDAITLVN 239
Query: 168 VLPACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
+LPACA++ GK++HGF++R L DDVFVGNALV YAK
Sbjct: 240 ILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAK 281
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F M E + D I+W+++++ YAQ G +AL++F +M G P+ +L ++L
Sbjct: 322 LFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM--QLYGLEPNVVTLASLLSG 379
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CA++ + GK+ H + I+ +L DD+ V N L+D YAK
Sbjct: 380 CASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAK 424
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 42 ISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPACAALKWSMQGKEIH 221
++W ++ YAQ+G DAL+LF ++ +P+A +L L ACA L G+++H
Sbjct: 446 VTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLH 505
Query: 222 GFAIRGLLTDDV-FVGNALVDQYAK 293
+A+R +V +VGN L+D Y+K
Sbjct: 506 AYALRNENESEVLYVGNCLIDMYSK 530
>ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Citrus sinensis]
Length = 860
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/97 (53%), Positives = 67/97 (69%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
+FDEM + G+ D +SWN+IV+AYAQ+G L LF RM D + D SLVN L AC
Sbjct: 192 LFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKV-QGDGVSLVNALSAC 250
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
A+L +GK++HG A+R +L +DVFVGNALVD YAK
Sbjct: 251 ASLGTWSRGKQVHGHALRTMLIEDVFVGNALVDMYAK 287
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/104 (34%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F +M + V + ++W+++++ YAQ G +AL++F +M + CG P+ +LV++L
Sbjct: 328 LFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQF-CG-LEPNVVTLVSLLSG 385
Query: 180 CAALKWSMQGKEIHGFAIRGLLT------DDVFVGNALVDQYAK 293
CA++ + GKE H + I+ +L+ DD+ V NAL+D YAK
Sbjct: 386 CASVGALLLGKETHCYTIKRVLSADGNHPDDLMVINALIDMYAK 429
>gb|ESW13450.1| hypothetical protein PHAVU_008G197200g [Phaseolus vulgaris]
Length = 863
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/97 (53%), Positives = 65/97 (67%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPAC 182
VFD++ + G+ D +SWNSIVSAY +L LF +M PD SLVN+LPAC
Sbjct: 195 VFDDLCQWGIQDLVSWNSIVSAYMGASDAKTSLLLFRKMT-RLNLMSPDVISLVNILPAC 253
Query: 183 AALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
A+L + G+E+HGFAIR L DDVFVGNA+VD YAK
Sbjct: 254 ASLAALLHGREVHGFAIRSGLVDDVFVGNAVVDMYAK 290
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 9/106 (8%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F+ M E + D ++W ++++ YAQ G+ +AL++F +M CG RP+ +LV++L A
Sbjct: 331 LFERMREEDIELDVVTWTAVITGYAQRGQGCEALDVFRQM-CSCGS-RPNVVTLVSLLSA 388
Query: 180 CAALKWSMQGKEIHGFAIRGLLT--------DDVFVGNALVDQYAK 293
CA++ + GKE H +AI+ +L+ DD+ V N L+D YAK
Sbjct: 389 CASVGALLHGKETHCYAIKSILSLDGPDPGDDDLKVINGLIDMYAK 434
>ref|XP_002515835.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544990|gb|EEF46504.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 655
Score = 97.4 bits (241), Expect = 2e-18
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHR--PDAHSLVNVLP 176
+FDE+ V+D +SWNS+++ Y Q+G +ELF RM W G PDA SLVNVLP
Sbjct: 196 MFDELLMGEVFDLVSWNSMIAVYLQSGDLKSGIELFRRM-WKVGEFDIVPDAVSLVNVLP 254
Query: 177 ACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
ACA++ + GK++HGFAIR L +DVFV N+LVD YAK
Sbjct: 255 ACASMGDWLCGKQVHGFAIRYGLFEDVFVANSLVDMYAK 293
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGVY-DRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F++M E + D +SW+++++ YAQ G +AL +F +M G RP+ +LV++L
Sbjct: 334 LFEKMREEKIQLDVVSWSAVIAGYAQRGLGYEALNVFRQMQ--VCGLRPNEVTLVSLLSG 391
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CA++ + GKE H ++I+ +L D++ V NA++D Y K
Sbjct: 392 CASVGALLHGKETHCYSIKCVLNFDRSDPRDELLVVNAIIDMYTK 436
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 42 ISWNSIVSAYAQNGRYADALELFGRMNWDCG-GHRPDAHSLVNVLPACAALKWSMQGKEI 218
++W +++ YAQ+G DALELF +M +P+A ++ L ACA L G++I
Sbjct: 458 VTWTAMIGGYAQHGEANDALELFSQMLKQYNRSVKPNAFTISCALMACARLAALRFGRQI 517
Query: 219 HGFAIRGLLTDDV-FVGNALVDQYAK 293
H F +R DV +V N L+D Y+K
Sbjct: 518 HAFVLRDQYDCDVLYVANCLIDMYSK 543
>ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial
[Oryza sativa Japonica Group]
Length = 890
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCG----GHRPDAHSLVNV 170
+FDE+T+RG+ D ISWNSIVSA+ ++ AL+LF +M R D S+VN+
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271
Query: 171 LPACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
LPAC +LK Q KE+HG AIR DVFVGNAL+D YAK
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 312
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 VFDE--MTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLP 176
+FD+ + ER V ++W ++ +AQ G DAL+LF M + G P+A+++ +L
Sbjct: 468 IFDDIPLEERNV---VTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILM 524
Query: 177 ACAALKWSMQGKEIHGFAIR--GLLTDDVFVGNALVDQYAK 293
ACA L GK+IH + +R + FV N L+D Y+K
Sbjct: 525 ACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 565
>emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCG----GHRPDAHSLVNV 170
+FDE+T+RG+ D ISWNSIVSA+ ++ AL+LF +M R D S+VN+
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278
Query: 171 LPACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
LPAC +LK Q KE+HG AIR DVFVGNAL+D YAK
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 319
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 VFDE--MTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLP 176
+FD+ + ER V ++W ++ +AQ G DAL+LF M + G P+A+++ +L
Sbjct: 475 IFDDIPLEERNV---VTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILM 531
Query: 177 ACAALKWSMQGKEIHGFAIR--GLLTDDVFVGNALVDQYAK 293
ACA L GK+IH + +R + FV N L+D Y+K
Sbjct: 532 ACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 572
>ref|XP_006654247.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Oryza brachyantha]
Length = 884
Score = 95.1 bits (235), Expect = 9e-18
Identities = 53/101 (52%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNW----DCGGHRPDAHSLVNV 170
VFDE+ +RG+ D ISWNSIVSA+ + AL LF +M R D S+VN+
Sbjct: 206 VFDEIIQRGIDDVISWNSIVSAHVKGSNPWTALHLFSKMTLIVHEKATNERSDIISIVNI 265
Query: 171 LPACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
LPACA+LK Q KE+HG AIR DVFVGNAL+D YAK
Sbjct: 266 LPACASLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 306
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F+ M + + D ++W ++++ Y+Q G +AL +F +M + G P++ ++++VL A
Sbjct: 347 LFNNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNVFQQMLFS--GSLPNSVTIISVLSA 404
Query: 180 CAALKWSMQGKEIHGFAIRGLL----------TDDVFVGNALVDQYAK 293
CA+L QG EIH ++I+ L +D+ V NAL+D Y+K
Sbjct: 405 CASLGAFSQGMEIHAYSIKNCLLTMDCDFGGDDEDLMVHNALIDMYSK 452
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +3
Query: 15 MTERGVYDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPACAALK 194
+ ER V ++W ++ YAQ G DAL+LF M + G P+A ++ +L ACA L
Sbjct: 468 LEERNV---VTWTVMIGGYAQYGDSNDALKLFVEMISEPYGVAPNAFTISCILMACAHLA 524
Query: 195 WSMQGKEIHGFAIR--GLLTDDVFVGNALVDQYAK 293
GK+IH + +R + FV N L+D Y+K
Sbjct: 525 ALRMGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 559
>ref|XP_006363979.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like isoform X1 [Solanum tuberosum]
gi|565396768|ref|XP_006363980.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X2 [Solanum tuberosum]
Length = 843
Score = 95.1 bits (235), Expect = 9e-18
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRM-NWDCGGHRPDAHSLVNVLPA 179
VFDE R D ISWNSIV+AY Q LELF M + + RPDA SLVNVLPA
Sbjct: 172 VFDETVVRETADVISWNSIVAAYVQKDEDKKVLELFDSMVSLNSFELRPDAVSLVNVLPA 231
Query: 180 CAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
C +L +GK++ G+AIR L +DVFVGNA+VD YAK
Sbjct: 232 CGSLGAWKRGKQLQGYAIRRCLHEDVFVGNAIVDMYAK 269
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F+ M E + + ++W++++S YAQ +AL +F M G P+ +LV+VL
Sbjct: 310 LFERMREEEIDLNVVTWSAVISGYAQRDLGYEALNIFKGMR--LSGAEPNVITLVSVLSG 367
Query: 180 CAALKWSMQGKEIHGFAIRGLLT-------DDVFVGNALVDQYAK 293
CAA+ QGKE H +AI+ + + +D+ V NAL+D YAK
Sbjct: 368 CAAIGALRQGKETHCYAIKRMFSLEGSNTEEDLMVTNALIDMYAK 412
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +3
Query: 3 VFDEMTERGVYDR--ISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLP 176
+FD++ R DR ++W ++ YAQ+G DALELF M D P+A+++ L
Sbjct: 422 MFDDIDRR---DRNVVTWTVMIGGYAQHGDANDALELFSAMLKDEYSVIPNAYTISCALV 478
Query: 177 ACAALKWSMQGKEIHGFAIR-GLLTDDVFVGNALVDQYAK 293
ACA L G++IH + +R G VFV N L+D YAK
Sbjct: 479 ACARLSSLRIGRQIHAYVLRQGYEPTIVFVANCLIDMYAK 518
>ref|XP_004975518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like isoform X1 [Setaria italica]
gi|514801211|ref|XP_004975519.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X2 [Setaria italica]
gi|514801214|ref|XP_004975520.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X3 [Setaria italica]
Length = 886
Score = 95.1 bits (235), Expect = 9e-18
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 VFDEMTERGVYDRISWNSIVSAYAQNGRYADALELFGRM----NWDCGGHRPDAHSLVNV 170
VFDEMT RG+ D ISWNSIV+A+ ++ AL+LF +M + R D S+VNV
Sbjct: 206 VFDEMTWRGIDDVISWNSIVAAHVKSNHPWTALDLFSKMALIVHEKATNERSDIISIVNV 265
Query: 171 LPACAALKWSMQGKEIHGFAIRGLLTDDVFVGNALVDQYAK 293
LPACA+LK Q KEIHG+AIR D FV NAL+D YAK
Sbjct: 266 LPACASLKALPQTKEIHGYAIRNGTFPDAFVCNALIDTYAK 306
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Frame = +3
Query: 3 VFDEMTERGV-YDRISWNSIVSAYAQNGRYADALELFGRMNWDCGGHRPDAHSLVNVLPA 179
+F M + + D I+W++++S YAQ G +AL+ +M G P++ ++++VL A
Sbjct: 347 LFKNMRKENIPLDVITWSAVISGYAQRGCGQEALDALRQMF--LYGSEPNSVTIISVLSA 404
Query: 180 CAALKWSMQGKEIHGFAIRGLLT------------DDVFVGNALVDQYAK 293
CA+L QG E H ++++ L +D+ V NAL+D Y+K
Sbjct: 405 CASLGALSQGMETHAYSLKKCLLLLDNHFGGDGDGEDLMVHNALIDMYSK 454