BLASTX nr result
ID: Rheum21_contig00037155
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037155
(242 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 122 6e-26
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 122 6e-26
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 122 6e-26
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 121 8e-26
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 120 2e-25
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 117 1e-24
gb|AAP43914.1| integrase [Gossypium raimondii] 117 1e-24
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera] 116 3e-24
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 116 4e-24
gb|AAX14649.1| gag-pol polyprotein [Setaria pumila] 115 6e-24
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 115 8e-24
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 115 8e-24
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 115 8e-24
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 114 1e-23
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 114 1e-23
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex] 114 1e-23
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 114 1e-23
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 114 1e-23
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 114 1e-23
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 114 2e-23
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 122 bits (305), Expect = 6e-26
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+YTPLP+P APWED+SMDF+ GLP +KRG+DSIFVVVDRFSKMAHFI C +
Sbjct: 1249 SKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSD 1308
Query: 182 SASEIAALFYDNMVRLHGIP 241
AS IA+LF+ +VRLHG+P
Sbjct: 1309 DASHIASLFFSEIVRLHGMP 1328
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 122 bits (305), Expect = 6e-26
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+YTPLP+P APWED+SMDF+ GLP +KRG+DSIFVVVDRFSKMAHFI C +
Sbjct: 217 SKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSD 276
Query: 182 SASEIAALFYDNMVRLHGIP 241
AS IA+LF+ +VRLHG+P
Sbjct: 277 DASHIASLFFSEIVRLHGMP 296
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 122 bits (305), Expect = 6e-26
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+YTPLP+P APWED+SMDF+ GLP +KRG+DSIFVVVDRFSKMAHFI C +
Sbjct: 217 SKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSD 276
Query: 182 SASEIAALFYDNMVRLHGIP 241
AS IA+LF+ +VRLHG+P
Sbjct: 277 DASHIASLFFSEIVRLHGMP 296
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 121 bits (304), Expect = 8e-26
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S HP+G+Y PLP+P PWED+SMDF+ GLP +KRG+DSIFVVVDRFSKMAHFI C T
Sbjct: 1246 SRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTD 1305
Query: 182 SASEIAALFYDNMVRLHGIP 241
AS IA LF+ +VRLHG+P
Sbjct: 1306 DASHIADLFFREIVRLHGVP 1325
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +2
Query: 14 PYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQSASE 193
P G+ PL +P W+++ MDFITGLP ++ G DSI+VVVDR +K+A FI KTT ++
Sbjct: 2072 PAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNK 2131
Query: 194 IAALFYDNMVRLHGIP 241
+A L++ +V LHG+P
Sbjct: 2132 LAELYFARIVSLHGVP 2147
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 120 bits (300), Expect = 2e-25
Identities = 53/80 (66%), Positives = 63/80 (78%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S HP+G+Y PLP+P PWED+SMDF+ GLP +KRG+DSIFVVVDRFSKM HFI C T
Sbjct: 1225 SRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKTD 1284
Query: 182 SASEIAALFYDNMVRLHGIP 241
AS IA LF+ +VRLHG+P
Sbjct: 1285 DASHIADLFFREIVRLHGVP 1304
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 117 bits (294), Expect = 1e-24
Identities = 51/80 (63%), Positives = 65/80 (81%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+YTPLP+P APWED+SMDF+ GLP ++RG+DSIFV VDRFSKMAHFI C +
Sbjct: 848 SKLNPHGLYTPLPVPNAPWEDISMDFVLGLPRTRRGRDSIFVAVDRFSKMAHFIPCNKSD 907
Query: 182 SASEIAALFYDNMVRLHGIP 241
AS +A LF+ +VRLHG+P
Sbjct: 908 DASHVADLFFREVVRLHGVP 927
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 117 bits (294), Expect = 1e-24
Identities = 51/80 (63%), Positives = 65/80 (81%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
ST P+G+YTPLP+P +PW D+S+DF+ GLP++K G+DSIFVVVDRFSKMAHFI C T
Sbjct: 216 STVMPHGLYTPLPVPSSPWTDISIDFVIGLPITKHGRDSIFVVVDRFSKMAHFIPCHKTD 275
Query: 182 SASEIAALFYDNMVRLHGIP 241
A+ +A LF+ +VRLHGIP
Sbjct: 276 DATHVADLFFREVVRLHGIP 295
>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
Length = 1115
Score = 116 bits (291), Expect = 3e-24
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = +2
Query: 14 PYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQSASE 193
P+G+YTPLP+P APW D+SMDF+ GLP S+ G+DSIFVVVDRFSKMAHFI+C T A+
Sbjct: 878 PHGLYTPLPVPSAPWVDISMDFVLGLPRSRNGRDSIFVVVDRFSKMAHFISCHKTDDATH 937
Query: 194 IAALFYDNMVRLHGIP 241
IA LF+ +VRLHG+P
Sbjct: 938 IANLFFRKIVRLHGVP 953
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 116 bits (290), Expect = 4e-24
Identities = 50/80 (62%), Positives = 65/80 (81%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+Y PLP+P APWED+SMDF+ GLP +++G+DS+FVVVDRFSKMAHFI C T
Sbjct: 1249 SRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKTD 1308
Query: 182 SASEIAALFYDNMVRLHGIP 241
A+ IA LF+ +VRLHG+P
Sbjct: 1309 DATHIADLFFREIVRLHGVP 1328
>gb|AAX14649.1| gag-pol polyprotein [Setaria pumila]
Length = 185
Score = 115 bits (288), Expect = 6e-24
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+Y PLP+P APWED+SMDF+ GLP +++G+DS+FVVVDRFSKMAHFI C T
Sbjct: 62 SRLNPHGLYLPLPVPSAPWEDISMDFVMGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKTD 121
Query: 182 SASEIAALFYDNMVRLHGIP 241
A IA LF+ +VRLHG+P
Sbjct: 122 DAPHIADLFFREIVRLHGVP 141
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 115 bits (287), Expect = 8e-24
Identities = 52/74 (70%), Positives = 61/74 (82%)
Frame = +2
Query: 20 GVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQSASEIA 199
G+YTPLP+P PWEDLSMDF+ GLP ++RG DSIFVVVDRFSKMAHFI CK AS +A
Sbjct: 1158 GLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVA 1217
Query: 200 ALFYDNMVRLHGIP 241
ALF+ +VRLHG+P
Sbjct: 1218 ALFFKEVVRLHGLP 1231
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 115 bits (287), Expect = 8e-24
Identities = 52/74 (70%), Positives = 61/74 (82%)
Frame = +2
Query: 20 GVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQSASEIA 199
G+YTPLP+P PWEDLSMDF+ GLP ++RG DSIFVVVDRFSKMAHFI CK AS +A
Sbjct: 989 GLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVA 1048
Query: 200 ALFYDNMVRLHGIP 241
ALF+ +VRLHG+P
Sbjct: 1049 ALFFKEVVRLHGLP 1062
>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
Length = 1392
Score = 115 bits (287), Expect = 8e-24
Identities = 52/74 (70%), Positives = 61/74 (82%)
Frame = +2
Query: 20 GVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQSASEIA 199
G+YTPLP+P PWEDLSMDF+ GLP ++RG DSIFVVVDRFSKMAHFI CK AS +A
Sbjct: 1029 GLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVA 1088
Query: 200 ALFYDNMVRLHGIP 241
ALF+ +VRLHG+P
Sbjct: 1089 ALFFKEVVRLHGLP 1102
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 114 bits (285), Expect = 1e-23
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+Y PLP+P PWED+SMDF+ GLP +K+G+DSIFVVVDRFSKMAHFI C +
Sbjct: 1274 SRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSD 1333
Query: 182 SASEIAALFYDNMVRLHGIP 241
A+ +A LF+ +VRLHG+P
Sbjct: 1334 DATHVADLFFREIVRLHGVP 1353
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 114 bits (285), Expect = 1e-23
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +2
Query: 8 SHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQSA 187
S P+G+YTPLPIP PW D+SMDF+ GLP ++ GKDSIFVVVDRFSKMAHFI C T A
Sbjct: 1439 SQPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDA 1498
Query: 188 SEIAALFYDNMVRLHGIP 241
IA LF+ +VRLHG+P
Sbjct: 1499 IHIANLFFREVVRLHGMP 1516
>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
Length = 227
Score = 114 bits (285), Expect = 1e-23
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+Y PLP+P PWED+SMDF+ GLP +K+G+DSIFVVVDRFSKMAHFI C +
Sbjct: 62 SRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSD 121
Query: 182 SASEIAALFYDNMVRLHGIP 241
A+ IA LF+ ++RLHG+P
Sbjct: 122 DATNIADLFFREVIRLHGVP 141
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 114 bits (285), Expect = 1e-23
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+Y PLP+P PWED+SMDF+ GLP +K+G+DSIFVVVDRFSKMAHFI C +
Sbjct: 587 SRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSD 646
Query: 182 SASEIAALFYDNMVRLHGIP 241
A+ +A LF+ +VRLHG+P
Sbjct: 647 DATHVADLFFREIVRLHGVP 666
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 114 bits (285), Expect = 1e-23
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+Y PLP+P PWED+SMDF+ GLP +K+G+DSIFVVVDRFSKMAHFI C +
Sbjct: 1170 SRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSD 1229
Query: 182 SASEIAALFYDNMVRLHGIP 241
A+ +A LF+ +VRLHG+P
Sbjct: 1230 DATHVADLFFREIVRLHGVP 1249
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 114 bits (285), Expect = 1e-23
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +2
Query: 2 STSHPYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQ 181
S +P+G+Y PLP+P PWED+SMDF+ GLP +K+G+DSIFVVVDRFSKMAHFI C +
Sbjct: 1274 SRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSD 1333
Query: 182 SASEIAALFYDNMVRLHGIP 241
A+ +A LF+ +VRLHG+P
Sbjct: 1334 DATHVADLFFREIVRLHGVP 1353
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 114 bits (284), Expect = 2e-23
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +2
Query: 14 PYGVYTPLPIPLAPWEDLSMDFITGLPVSKRGKDSIFVVVDRFSKMAHFIACKTTQSASE 193
P+G+YTPLP+P PW D+SMDF+ GLP +K GKDS+FVVVDRFSKMAHFI CK A
Sbjct: 847 PHGLYTPLPVPEYPWTDISMDFVLGLPKTKNGKDSVFVVVDRFSKMAHFIPCKKVDDACH 906
Query: 194 IAALFYDNMVRLHGIP 241
+A LF+ +VRLHG+P
Sbjct: 907 VADLFFKEIVRLHGLP 922