BLASTX nr result
ID: Rheum21_contig00037121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00037121
(1025 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera] 321 3e-85
gb|EMJ05969.1| hypothetical protein PRUPE_ppa015604mg [Prunus pe... 284 3e-74
gb|ESW29877.1| hypothetical protein PHAVU_002G106000g [Phaseolus... 281 2e-73
ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi... 279 1e-72
ref|XP_006352332.1| PREDICTED: pentatricopeptide repeat-containi... 278 3e-72
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi... 276 7e-72
ref|XP_006425390.1| hypothetical protein CICLE_v10027592mg [Citr... 276 9e-72
ref|XP_006383060.1| pentatricopeptide repeat-containing family p... 275 2e-71
ref|XP_002327644.1| predicted protein [Populus trichocarpa] 275 2e-71
gb|EXC35313.1| hypothetical protein L484_026636 [Morus notabilis] 269 2e-69
ref|XP_004512166.1| PREDICTED: pentatricopeptide repeat-containi... 265 3e-68
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ... 263 1e-67
ref|XP_002877796.1| binding protein [Arabidopsis lyrata subsp. l... 262 1e-67
ref|XP_006403930.1| hypothetical protein EUTSA_v10010283mg [Eutr... 259 9e-67
ref|NP_190700.2| pentatricopeptide repeat-containing protein [Ar... 259 2e-66
ref|XP_006857380.1| hypothetical protein AMTR_s00067p00130250 [A... 257 5e-66
ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containi... 254 4e-65
emb|CAB62654.1| putative protein [Arabidopsis thaliana] 215 2e-53
ref|XP_002531149.1| pentatricopeptide repeat-containing protein,... 206 2e-50
gb|EOY09680.1| Pentatricopeptide repeat (PPR) superfamily protei... 191 3e-46
>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
Length = 901
Score = 321 bits (823), Expect = 3e-85
Identities = 155/291 (53%), Positives = 208/291 (71%)
Frame = -3
Query: 873 QQKSPLNLLHRILDGLNHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYT 694
Q++ ++ + L L CR + QLSQI A I SG KPF A+K+L +S++ D+NYT
Sbjct: 364 QERRKISRSNSCLALLKTCRNMRQLSQIQAYLIISGLFRKPFVASKVLKVSADYADVNYT 423
Query: 693 LVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARC 514
++IFR I+ D +CVNA+IKAYS SS A Q +VFYF+ L+ GF NSFTFPPL +CC +
Sbjct: 424 ILIFRSIDSPDTVCVNAVIKAYSISSVAHQALVFYFETLRNGFMCNSFTFPPLFSCCRKX 483
Query: 513 GCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSII 334
GC G+K HGQA+K G D+VL+++NS++HMYGC ++E A +VF EM RDLVSW+SII
Sbjct: 484 GCVEYGEKFHGQAIKNGVDNVLDVQNSMVHMYGCCGVVEXAEKVFGEMSKRDLVSWNSII 543
Query: 333 GALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANAR 154
A + +G + AH LFD MPE+N VSWN++M GYL+ PG LKLFR+M N G
Sbjct: 544 DAYAKLGHLVLAHRLFDAMPERNAVSWNIMMGGYLKGGNPGCALKLFREMANAGLRGGET 603
Query: 153 SVVSVLTACGKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
++VSVLTAC +SARLKEG S+HG+LIR +LI+ TAL+DMYS+C +V+
Sbjct: 604 TMVSVLTACCRSARLKEGRSIHGVLIRTFLKSSLILDTALIDMYSKCERVD 654
>gb|EMJ05969.1| hypothetical protein PRUPE_ppa015604mg [Prunus persica]
Length = 568
Score = 284 bits (727), Expect = 3e-74
Identities = 138/285 (48%), Positives = 194/285 (68%)
Frame = -3
Query: 855 NLLHRILDGLNHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRD 676
+L I L+ C+ L Q++QIHA IT G + F+A KLL S+ D +Y ++IFR
Sbjct: 46 SLNRHIFSLLDACKNLIQITQIHAHLITRGLFDS-FWARKLLKSYSDFRDFDYVILIFRC 104
Query: 675 INILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSG 496
I++ CVN +IKAYS SS Q +V YF+ L+ GF+ S+TF PL+ CA+ G SG
Sbjct: 105 IDLPGTFCVNTVIKAYSVSSMPDQALVVYFEWLRNGFAPTSYTFVPLIGSCAKMGSVESG 164
Query: 495 QKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNV 316
+KCHGQ VK G D +L+++NSLIHMY E +E A +F EM +RDLVSW++I+ +
Sbjct: 165 RKCHGQVVKHGLDSLLQVQNSLIHMYCSSEKVELARMMFDEMSERDLVSWNTILDGYARF 224
Query: 315 GDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVL 136
GD+ AH+LFDEMPE+N+VSWNV++ GY + PG LKLFR+M+ N+ ++ ++L
Sbjct: 225 GDLDVAHNLFDEMPERNVVSWNVMLGGYWKGGKPGCALKLFRKMMGMELKGNSTTIANML 284
Query: 135 TACGKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
ACG+SARL EG SVHG LIRK + N+++ TAL+DMY +C++VE
Sbjct: 285 AACGRSARLNEGRSVHGYLIRKLFEFNIVISTALIDMYCKCKRVE 329
Score = 62.0 bits (149), Expect = 4e-07
Identities = 39/153 (25%), Positives = 74/153 (48%)
Frame = -3
Query: 735 LLNLSSEMGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSAN 556
+L+ + GDL+ +F ++ + + N ++ Y + + +M+ + N
Sbjct: 217 ILDGYARFGDLDVAHNLFDEMPERNVVSWNVMLGGYWKGGKPGCALKLFRKMMGMELKGN 276
Query: 555 SFTFPPLLNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQ 376
S T +L C R G+ HG +++ F+ + I +LI MY + +E A RVF+
Sbjct: 277 STTIANMLAACGRSARLNEGRSVHGYLIRKLFEFNIVISTALIDMYCKCKRVEVACRVFE 336
Query: 375 EMPDRDLVSWHSIIGALSNVGDVRTAHHLFDEM 277
M +R+LV W++II G+ + +L+ EM
Sbjct: 337 SMANRNLVCWNAIILGHCIHGNAKDGLNLYREM 369
>gb|ESW29877.1| hypothetical protein PHAVU_002G106000g [Phaseolus vulgaris]
Length = 583
Score = 281 bits (720), Expect = 2e-73
Identities = 138/275 (50%), Positives = 184/275 (66%)
Frame = -3
Query: 825 NHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICVN 646
N CR+ L QI AL +TS PF A +L+ +S + D+ YTL+IFR IN D CVN
Sbjct: 53 NSCRSARHLLQIQALLVTSSLFRNPFLARTVLSRASRLCDVAYTLLIFRHINSSDTFCVN 112
Query: 645 ALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKR 466
+I AY S Q V+FYF+ L GF NS+TF PL+ CAR GC SG++CH QA K
Sbjct: 113 TVIHAYCDSDAPHQTVIFYFRSLMRGFFPNSYTFVPLVGSCARTGCVDSGKECHAQATKN 172
Query: 465 GFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLF 286
G D VL ++NSLIHMY C ++ A +F M RDLVSW+SII VG++ AH LF
Sbjct: 173 GVDSVLPVQNSLIHMYACCGGVQLARVLFDGMLTRDLVSWNSIIDGHMMVGELNAAHRLF 232
Query: 285 DEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLK 106
D+MP++N+V+WNV+++GYL+ PG+ +KLFR M G NAR++V + TACG+S RLK
Sbjct: 233 DQMPDRNLVTWNVMISGYLKGRNPGYAMKLFRTMGRLGMRGNARTMVCLATACGRSGRLK 292
Query: 105 EGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
EG SVHG +++ +LI+ TAL+DMYS+CR+VE
Sbjct: 293 EGRSVHGSIVKMFVRSSLILDTALIDMYSKCRRVE 327
Score = 61.2 bits (147), Expect = 6e-07
Identities = 40/146 (27%), Positives = 63/146 (43%)
Frame = -3
Query: 714 MGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPL 535
+G+LN +F + + + N +I Y + + + M ++G N+ T L
Sbjct: 222 VGELNAAHRLFDQMPDRNLVTWNVMISGYLKGRNPGYAMKLFRTMGRLGMRGNARTMVCL 281
Query: 534 LNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDL 355
C R G G+ HG VK L + +LI MY +E A VF M +R+L
Sbjct: 282 ATACGRSGRLKEGRSVHGSIVKMFVRSSLILDTALIDMYSKCRRVEVARTVFDRMTERNL 341
Query: 354 VSWHSIIGALSNVGDVRTAHHLFDEM 277
+SW+++I G LF EM
Sbjct: 342 ISWNAMILGSCIQGSPEDGLSLFGEM 367
>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Glycine max]
Length = 579
Score = 279 bits (714), Expect = 1e-72
Identities = 137/275 (49%), Positives = 183/275 (66%)
Frame = -3
Query: 825 NHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICVN 646
N C+ L QI AL +TS P+ A +L+ +S + D+ YT VIFR IN LD CVN
Sbjct: 49 NSCQNARHLLQIQALLVTSSLFRNPYLARTILSRASHLCDVAYTRVIFRSINSLDTFCVN 108
Query: 645 ALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKR 466
+I+AYS S + +VFYF+ L GF NS+TF PL+ CA+ GC SG++CH QA K
Sbjct: 109 IVIQAYSNSHAPREAIVFYFRSLMRGFFPNSYTFVPLVASCAKMGCIGSGKECHAQATKN 168
Query: 465 GFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLF 286
G D VL ++NSLIHMY C ++ A +F M RDLVSW+SII VG++ AH LF
Sbjct: 169 GVDSVLPVQNSLIHMYVCCGGVQLARVLFDGMLSRDLVSWNSIINGHMMVGELNAAHRLF 228
Query: 285 DEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLK 106
D+MPE+N+V+WNV+++GYL+ PG+ +KLFR+M G NAR++V V TACG+S RLK
Sbjct: 229 DKMPERNLVTWNVMISGYLKGRNPGYAMKLFREMGRLGLRGNARTMVCVATACGRSGRLK 288
Query: 105 EGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
E SVHG ++R +LI+ TAL+ MY +CRKVE
Sbjct: 289 EAKSVHGSIVRMSLRSSLILDTALIGMYCKCRKVE 323
Score = 58.5 bits (140), Expect = 4e-06
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 2/216 (0%)
Frame = -3
Query: 735 LLNLSSEMGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSAN 556
++N +G+LN +F + + + N +I Y + + + +M ++G N
Sbjct: 211 IINGHMMVGELNAAHRLFDKMPERNLVTWNVMISGYLKGRNPGYAMKLFREMGRLGLRGN 270
Query: 555 SFTFPPLLNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQ 376
+ T + C R G + HG V+ L + +LI MY +E A VF+
Sbjct: 271 ARTMVCVATACGRSGRLKEAKSVHGSIVRMSLRSSLILDTALIGMYCKCRKVEVAQIVFE 330
Query: 375 EMPDRDLVSWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMT-GYLENNMPG-FVL 202
M +R+LVSW+ +I H PE + + V+++ G +++ + L
Sbjct: 331 RMRERNLVSWNMMI-----------LGHCIRGSPEDGLDLFEVMISMGKMKHGVESDETL 379
Query: 201 KLFRQMLNEGFMANARSVVSVLTACGKSARLKEGMS 94
+L + N + + VL AC ++ L EG S
Sbjct: 380 RL---------LPNEVTFIGVLCACARAEMLDEGRS 406
>ref|XP_006352332.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like isoform X1 [Solanum tuberosum]
gi|565371484|ref|XP_006352333.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g51320-like isoform X2 [Solanum tuberosum]
Length = 534
Score = 278 bits (710), Expect = 3e-72
Identities = 142/284 (50%), Positives = 188/284 (66%), Gaps = 3/284 (1%)
Frame = -3
Query: 843 RILDGLNHCRTLAQLSQIHALQITSGCMN--KPFFAAKLLNLSSE-MGDLNYTLVIFRDI 673
+ L+ L+ C++LAQL QI A I +G + P ++ + L L ++ D+ YT ++F+ I
Sbjct: 32 KALEFLDSCQSLAQLFQIQAHLIITGLLQVQNPSYSCRFLKLCTQHCDDIEYTALVFKCI 91
Query: 672 NILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQ 493
+ D VN +IKAY+ SS VVFYFQ LK GF NSFTFPPL++ CAR G SGQ
Sbjct: 92 HFPDTFSVNTVIKAYACSSLPDNAVVFYFQRLKNGFLPNSFTFPPLMSACARRGRLDSGQ 151
Query: 492 KCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVG 313
KCHGQ VK G D VL+++NSL+H Y C I+ A +VF EM RD+VSW+SI+ VG
Sbjct: 152 KCHGQVVKNGVDGVLQVQNSLVHFYSCCGFIDLARKVFDEMHQRDVVSWNSIMNGYVKVG 211
Query: 312 DVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLT 133
++ A LFD MPE N+V WNV+MTGYL +N PG LKLFR+M G N ++V +T
Sbjct: 212 ELVVARQLFDAMPECNLVGWNVMMTGYLNSNNPGKCLKLFREMAQRGLNGNDTTIVIAVT 271
Query: 132 ACGKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
AC +SAR+KEG SVHG LI+ +LNLI+ T L+ MYSRC + E
Sbjct: 272 ACARSARMKEGKSVHGCLIKASKDLNLIVSTTLIHMYSRCGRAE 315
>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Cucumis sativus]
Length = 575
Score = 276 bits (707), Expect = 7e-72
Identities = 134/275 (48%), Positives = 185/275 (67%)
Frame = -3
Query: 828 LNHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICV 649
L C+++ +L Q H ITSG N F+A ++L +SE GD+ YT++IFR I + + CV
Sbjct: 56 LQSCQSVRELFQFHGHLITSGLFNDHFWANRVLLQASEFGDIVYTVLIFRHIKVPNTFCV 115
Query: 648 NALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVK 469
N +IKAYS S+ ++ V YF+ L G +S+TF L + CA GC SG+KCHGQA K
Sbjct: 116 NRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGCGASGRKCHGQAFK 175
Query: 468 RGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHL 289
G D V+ + NSLIHMYGC + IE +VF EM +DLVSW+SI+ A + VGD+ TAH +
Sbjct: 176 NGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNSIVTAYARVGDLYTAHDM 235
Query: 288 FDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARL 109
FD MPE+N+VSWN++++ YL PG +KLFR M+N G N ++V+VL+AC +SARL
Sbjct: 236 FDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLSACSRSARL 295
Query: 108 KEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKV 4
EG SVHG + R + ++TALVDMYS+C +V
Sbjct: 296 NEGRSVHGFMYRASMKFCVFINTALVDMYSKCHRV 330
>ref|XP_006425390.1| hypothetical protein CICLE_v10027592mg [Citrus clementina]
gi|557527380|gb|ESR38630.1| hypothetical protein
CICLE_v10027592mg [Citrus clementina]
Length = 563
Score = 276 bits (706), Expect = 9e-72
Identities = 137/282 (48%), Positives = 184/282 (65%), Gaps = 1/282 (0%)
Frame = -3
Query: 843 RILDGLNHCRTLAQLSQIHALQITSGCM-NKPFFAAKLLNLSSEMGDLNYTLVIFRDINI 667
R + L C+ + QL QI A ITSG N F+ LL S++ G +YT+++F+ IN
Sbjct: 50 RTISFLKSCQNMKQLLQIQAHLITSGLFFNNSFWTINLLKHSADFGSPDYTVLVFKCINN 109
Query: 666 LDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKC 487
CVNA++KAYS S Q VVFYFQM+K GF NS+TF L CA+ GC G C
Sbjct: 110 PGTFCVNAVVKAYSNSCVPDQAVVFYFQMIKNGFMPNSYTFVSLFGSCAKTGCVERGGMC 169
Query: 486 HGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDV 307
HG A+K G D L + NSLI+MYGCF ++ A F +M RDL+SW+SI+ GD+
Sbjct: 170 HGLALKNGVDFELPVMNSLINMYGCFGAMDCARNTFVQMSHRDLISWNSIVSGHVRSGDM 229
Query: 306 RTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTAC 127
AH LFD MPE+N+VSWN++++GY ++ PG LKLFR+M+ GF N +++ SVLTAC
Sbjct: 230 SAAHELFDIMPERNVVSWNIMISGYSKSGNPGCSLKLFREMMKSGFRGNDKTMASVLTAC 289
Query: 126 GKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
G+SAR EG SVHG +R N+I+ TAL+D+YS+C+KVE
Sbjct: 290 GRSARFNEGRSVHGYTVRTSLKPNIILDTALIDLYSKCQKVE 331
>ref|XP_006383060.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550338637|gb|ERP60857.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 275 bits (704), Expect = 2e-71
Identities = 136/267 (50%), Positives = 187/267 (70%)
Frame = -3
Query: 801 LSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICVNALIKAYSA 622
L QI A IT G + ++ +LL ++ GD++YT+ IF+ I VN ++KAYS
Sbjct: 67 LYQIQAQLITCGLFS--LWSPRLLKHFADFGDIDYTIFIFKFIASPGTFVVNNVVKAYSL 124
Query: 621 SSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKRGFDDVLEI 442
SS+ + +VFYF+MLK GF NS+TF L CCA+ GCA G+K HGQAVK G D +L +
Sbjct: 125 SSEPNKALVFYFEMLKSGFCPNSYTFVSLFGCCAKVGCAKLGKKYHGQAVKNGVDRILPV 184
Query: 441 RNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLFDEMPEKNM 262
NSLIH YGC + A +VF EM RDLVSW+SII + +G++ AH LF+ MPE+N+
Sbjct: 185 ENSLIHCYGCCGDMGLAKKVFDEMSHRDLVSWNSIIDGYATLGELGIAHGLFEVMPERNV 244
Query: 261 VSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLKEGMSVHGL 82
VSWN+L++GYL+ N PG VL LFR+M+N+G N ++VSVL+ACG+SARL+EG SVHG
Sbjct: 245 VSWNILISGYLKGNNPGCVLMLFRKMMNDGMRGNDSTIVSVLSACGRSARLREGRSVHGF 304
Query: 81 LIRKQWNLNLIMHTALVDMYSRCRKVE 1
+++K ++N+I T L+DMY+RC KVE
Sbjct: 305 IVKKFSSMNVIHETTLIDMYNRCHKVE 331
>ref|XP_002327644.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 275 bits (704), Expect = 2e-71
Identities = 136/267 (50%), Positives = 187/267 (70%)
Frame = -3
Query: 801 LSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICVNALIKAYSA 622
L QI A IT G + ++ +LL ++ GD++YT+ IF+ I VN ++KAYS
Sbjct: 67 LYQIQAQLITCGLFS--LWSPRLLKHFADFGDIDYTIFIFKFIASPGTFVVNNVVKAYSL 124
Query: 621 SSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKRGFDDVLEI 442
SS+ + +VFYF+MLK GF NS+TF L CCA+ GCA G+K HGQAVK G D +L +
Sbjct: 125 SSEPNKALVFYFEMLKSGFCPNSYTFVSLFGCCAKVGCAKLGKKYHGQAVKNGVDRILPV 184
Query: 441 RNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLFDEMPEKNM 262
NSLIH YGC + A +VF EM RDLVSW+SII + +G++ AH LF+ MPE+N+
Sbjct: 185 ENSLIHCYGCCGDMGLAKKVFDEMSHRDLVSWNSIIDGYATLGELGIAHGLFEVMPERNV 244
Query: 261 VSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLKEGMSVHGL 82
VSWN+L++GYL+ N PG VL LFR+M+N+G N ++VSVL+ACG+SARL+EG SVHG
Sbjct: 245 VSWNILISGYLKGNNPGCVLMLFRKMMNDGMRGNDSTIVSVLSACGRSARLREGRSVHGF 304
Query: 81 LIRKQWNLNLIMHTALVDMYSRCRKVE 1
+++K ++N+I T L+DMY+RC KVE
Sbjct: 305 IVKKFSSMNVIHETTLIDMYNRCHKVE 331
>gb|EXC35313.1| hypothetical protein L484_026636 [Morus notabilis]
Length = 577
Score = 269 bits (687), Expect = 2e-69
Identities = 129/275 (46%), Positives = 183/275 (66%)
Frame = -3
Query: 828 LNHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICV 649
L+ +TL Q+ Q+HA +TSG F+A K L S+ G ++YT++IFR I+ CV
Sbjct: 52 LDASQTLIQVRQVHANMLTSGIFTS-FWARKFLKFYSDFGHVDYTILIFRYIDFPGAFCV 110
Query: 648 NALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVK 469
N +++AYS D+ Q ++FYF+ L+ GFS NS+TF +L CCA+ G SG+ C GQA+K
Sbjct: 111 NTVLRAYSVGFDSNQALIFYFESLRNGFSPNSYTFVTVLGCCAKLGSLESGEMCRGQAIK 170
Query: 468 RGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHL 289
G D L+I+NSLIHMYGC + A +V EM +RDLVSW+S++ VG V AH +
Sbjct: 171 NGVDSALQIQNSLIHMYGCCGNVGLARKVLDEMSERDLVSWNSLLDVYVRVGRVDVAHRM 230
Query: 288 FDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARL 109
FD+MPE+N+ SWN++ GYL +PG VLKL R+M G + +VV+ +TAC +++RL
Sbjct: 231 FDKMPERNVASWNIIARGYLNGGVPGCVLKLVREMGKLGLRGDGTTVVNAITACARASRL 290
Query: 108 KEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKV 4
KEG SVHG LIR ++ + TAL+DMYS+C +V
Sbjct: 291 KEGRSVHGSLIRTGLESSVFIDTALIDMYSKCHRV 325
>ref|XP_004512166.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Cicer arietinum]
Length = 598
Score = 265 bits (676), Expect = 3e-68
Identities = 134/275 (48%), Positives = 178/275 (64%), Gaps = 1/275 (0%)
Frame = -3
Query: 822 HCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINI-LDRICVN 646
+C+T L QI AL ITS PF LL +S + D+ +T +IF+ N LD CVN
Sbjct: 59 YCQTTRHLLQIQALLITSSFYRNPFLVRTLLRRASNLCDVAFTFLIFQHFNNPLDTFCVN 118
Query: 645 ALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKR 466
+I +Y S + +VFYFQ LK+ F NS+TF PL+ C+ GC SG+ CH QAVK
Sbjct: 119 TVINSYCNSYVPNKAIVFYFQSLKIRFFPNSYTFVPLIGSCSNMGCVDSGRMCHAQAVKN 178
Query: 465 GFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLF 286
G D VL ++NSL+HMY + A +F M DRD VSW+S+I VGD+ AH LF
Sbjct: 179 GVDFVLPVQNSLVHMYASCGDVCVARVMFDAMMDRDSVSWNSMIDGYVKVGDLNAAHQLF 238
Query: 285 DEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLK 106
D MPE+N+V+WN +++G+L+ PG+ LKLFR+M G N R++VSV+TACG+S RLK
Sbjct: 239 DVMPERNLVTWNCMISGFLKGRNPGYGLKLFREMGRLGLRGNVRTMVSVVTACGRSGRLK 298
Query: 105 EGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
EG SVHG +IR NLI+ TAL+DMY +CR+VE
Sbjct: 299 EGKSVHGSIIRLFARSNLILDTALIDMYCKCRRVE 333
Score = 68.6 bits (166), Expect = 4e-09
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 10/247 (4%)
Frame = -3
Query: 717 EMGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPP 538
++GDLN +F + + + N +I + + G+ + +M ++G N T
Sbjct: 227 KVGDLNAAHQLFDVMPERNLVTWNCMISGFLKGRNPGYGLKLFREMGRLGLRGNVRTMVS 286
Query: 537 LLNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRD 358
++ C R G G+ HG ++ L + +LI MY +E A++VF+ M +R+
Sbjct: 287 VVTACGRSGRLKEGKSVHGSIIRLFARSNLILDTALIDMYCKCRRVEVASKVFERMGNRN 346
Query: 357 LVSWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLN 178
LVSW+++I G LFD M V V + + P L R
Sbjct: 347 LVSWNAMILGHCIRGSPEDGLSLFDLMVGMVRVKGEVEI-----DESPSADSGLVR---- 397
Query: 177 EGFMANARSVVSVLTACGKSARLKEGMS-------VHGLL--IRKQWNL-NLIMHTALVD 28
F+ + + + VL AC ++ L EG S V GL W + NL+ + LVD
Sbjct: 398 --FLPDEITFIGVLCACARAELLSEGRSYFKQMIDVFGLKPNFAHFWCMANLLANAGLVD 455
Query: 27 MYSRCRK 7
C K
Sbjct: 456 EAEECLK 462
>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513563|gb|AES95186.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 665
Score = 263 bits (671), Expect = 1e-67
Identities = 143/328 (43%), Positives = 194/328 (59%), Gaps = 2/328 (0%)
Frame = -3
Query: 978 MARVFTRYILRSENPFQFLHLSTFXXXXXXXXXXPQQKSPLNLLH-RILDGLNHCRTLAQ 802
MAR+++R NPF F L LH + L +HC+T
Sbjct: 1 MARIYSRNFFPFRNPF-------FSRPITSSSSSSPSSQFLTHLHFQSLLQPSHCQTTHH 53
Query: 801 LSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINI-LDRICVNALIKAYS 625
L QI +L ITS PF + LL+ +S + +++T +IF N LD CVN +I +Y
Sbjct: 54 LLQIQSLLITSSFYRNPFLSRTLLSRASNLCTVDFTFLIFHHFNNPLDTFCVNTVINSYC 113
Query: 624 ASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKRGFDDVLE 445
S + +VFYF LK+GF ANS+TF L++ C++ C +G+ CHGQAVK G D VL
Sbjct: 114 NSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCVDNGKMCHGQAVKNGVDFVLP 173
Query: 444 IRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLFDEMPEKN 265
+ NSL HMYG +E A +F M RDLVSW+S+I VGD+ AH LFD MPE+N
Sbjct: 174 VENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERN 233
Query: 264 MVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLKEGMSVHG 85
+V+WN L++GY + PG+ LKLFR+M NAR++V +TACG+S RLKEG SVHG
Sbjct: 234 LVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHG 293
Query: 84 LLIRKQWNLNLIMHTALVDMYSRCRKVE 1
+IR +LI+ TAL+DMY +C +VE
Sbjct: 294 SMIRLFMRSSLILDTALIDMYCKCGRVE 321
Score = 62.0 bits (149), Expect = 4e-07
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 10/247 (4%)
Frame = -3
Query: 717 EMGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPP 538
++GDL+ +F + + + N LI YS + + + +M ++ N+ T
Sbjct: 215 KVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVC 274
Query: 537 LLNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRD 358
+ C R G G+ HG ++ L + +LI MY +E A++VF+ M R+
Sbjct: 275 AVTACGRSGRLKEGKSVHGSMIRLFMRSSLILDTALIDMYCKCGRVEAASKVFERMSSRN 334
Query: 357 LVSWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLN 178
LVSW+++I G+ LFD M V G +E + + ++L
Sbjct: 335 LVSWNAMILGHCIHGNPEDGLSLFDLMVGMERVK------GEVEVDESSSADRGLVRLLP 388
Query: 177 EGFMANARSVVSVLTACGKSARLKEGMS-------VHGLL--IRKQWNL-NLIMHTALVD 28
+ + + +L AC ++ L EG S V GL W + NL+ + L+D
Sbjct: 389 DEI-----TFIGILCACARAELLSEGRSYFKQMIDVFGLKPNFAHFWCMANLLANVGLID 443
Query: 27 MYSRCRK 7
C K
Sbjct: 444 EAEECLK 450
>ref|XP_002877796.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323634|gb|EFH54055.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 530
Score = 262 bits (670), Expect = 1e-67
Identities = 131/271 (48%), Positives = 180/271 (66%)
Frame = -3
Query: 813 TLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICVNALIK 634
++ L Q+HA ITSG +A +LL SS GD +YTL IFR I L C N + K
Sbjct: 34 SIKHLFQVHARLITSGNFWDSSWAIRLLKCSSRFGDSSYTLSIFRSIGKL--YCANPVFK 91
Query: 633 AYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKRGFDD 454
AY SS Q + FYF +L+ GF +++TF L++C + C SG+ CHGQA+K G D
Sbjct: 92 AYLVSSSPKQALGFYFDILRFGFVPDTYTFVSLVSCIEKTCCVDSGKMCHGQAIKHGCDQ 151
Query: 453 VLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLFDEMP 274
VL ++NSLIHMY C ++ A ++F E+P RD+VSW+SII + GDV AH LFDEMP
Sbjct: 152 VLPVQNSLIHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGVVRNGDVLYAHKLFDEMP 211
Query: 273 EKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLKEGMS 94
EKNM+SWN++++ YL N PG + LFR+M+ GF N ++V +L ACG+SARLKEG S
Sbjct: 212 EKNMISWNIMISAYLGANNPGVSIFLFREMVGAGFQGNENTLVLLLNACGRSARLKEGRS 271
Query: 93 VHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
VH LIR N ++++ TAL+DMY +C++V+
Sbjct: 272 VHASLIRTFLNSSVVIDTALIDMYGKCKEVD 302
Score = 74.7 bits (182), Expect = 5e-11
Identities = 49/212 (23%), Positives = 90/212 (42%)
Frame = -3
Query: 711 GDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLL 532
GD+ Y +F ++ + I N +I AY +++ + + +M+ GF N T LL
Sbjct: 198 GDVLYAHKLFDEMPEKNMISWNIMISAYLGANNPGVSIFLFREMVGAGFQGNENTLVLLL 257
Query: 531 NCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLV 352
N C R G+ H ++ + + I +LI MYG + ++ A R+F
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVDLARRIF--------- 308
Query: 351 SWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEG 172
D + +N V+WNV++ + + P L+LF M+N
Sbjct: 309 ----------------------DSLSVRNKVTWNVMILAHCLHGRPEDGLELFEAMINGL 346
Query: 171 FMANARSVVSVLTACGKSARLKEGMSVHGLLI 76
+ + V VL C ++ + +G S + L++
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVYQGQSYYSLMV 378
>ref|XP_006403930.1| hypothetical protein EUTSA_v10010283mg [Eutrema salsugineum]
gi|557105049|gb|ESQ45383.1| hypothetical protein
EUTSA_v10010283mg [Eutrema salsugineum]
Length = 529
Score = 259 bits (663), Expect = 9e-67
Identities = 133/288 (46%), Positives = 184/288 (63%)
Frame = -3
Query: 864 SPLNLLHRILDGLNHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVI 685
SP+ L R + T+ L Q+HA I SG + +LL SS GD +YT+ I
Sbjct: 17 SPVLGLLRGFKLVEESTTVRHLFQVHARLIASGNFWDSTWGIRLLKCSSRFGDASYTVSI 76
Query: 684 FRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCA 505
FR I L C N + KAY SS Q + FYF + K GF ++++F PL C + C
Sbjct: 77 FRSIGKL--YCANPVFKAYLLSSTPQQALGFYFDIRKCGFVPDTYSFVPLFGCIEKTCCV 134
Query: 504 VSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGAL 325
SG+ CHGQA+K G D VL ++NSL+HMY C +E A ++F E+P RD+VSW+SII
Sbjct: 135 DSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALELAKKLFVEIPKRDIVSWNSIIAGA 194
Query: 324 SNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVV 145
GD+ AH LFDEMPEKNMVSWN++++ YL N PG +KLFR+M+ GF N R++V
Sbjct: 195 VRDGDILYAHKLFDEMPEKNMVSWNIMISAYLGANNPGVSIKLFREMVGAGFHGNERTLV 254
Query: 144 SVLTACGKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
+++ACG+SARLKEG SVH LIR N ++++ TAL++MY +C++V+
Sbjct: 255 LLMSACGRSARLKEGRSVHASLIRILLNTSVVIDTALINMYGKCKEVD 302
Score = 70.1 bits (170), Expect = 1e-09
Identities = 46/212 (21%), Positives = 92/212 (43%)
Frame = -3
Query: 711 GDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLL 532
GD+ Y +F ++ + + N +I AY +++ + + +M+ GF N T L+
Sbjct: 198 GDILYAHKLFDEMPEKNMVSWNIMISAYLGANNPGVSIKLFREMVGAGFHGNERTLVLLM 257
Query: 531 NCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLV 352
+ C R G+ H ++ + + I +LI+MYG + ++ A R+F + R+ V
Sbjct: 258 SACGRSARLKEGRSVHASLIRILLNTSVVIDTALINMYGKCKEVDLARRIFDSVSRRNRV 317
Query: 351 SWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEG 172
+W NV++ + + P LKLF+ M+N
Sbjct: 318 TW-------------------------------NVMILAHCLHGDPEDGLKLFQDMINGM 346
Query: 171 FMANARSVVSVLTACGKSARLKEGMSVHGLLI 76
+ + + V VL C +S + +G S + +++
Sbjct: 347 LIPDEVTFVGVLCGCARSGLVSQGKSYYAMMV 378
>ref|NP_190700.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122230198|sp|Q0WVU0.1|PP278_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g51320 gi|110741620|dbj|BAE98758.1| hypothetical
protein [Arabidopsis thaliana]
gi|332645257|gb|AEE78778.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 259 bits (661), Expect = 2e-66
Identities = 127/270 (47%), Positives = 179/270 (66%)
Frame = -3
Query: 813 TLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGDLNYTLVIFRDINILDRICVNALIK 634
++ L Q+HA ITSG +A +LL SS GD +YT+ I+R I L C N + K
Sbjct: 34 SITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKL--YCANPVFK 91
Query: 633 AYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHGQAVKRGFDD 454
AY SS Q + FYF +L+ GF +S+TF L++C + C SG+ CHGQA+K G D
Sbjct: 92 AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQ 151
Query: 453 VLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRTAHHLFDEMP 274
VL ++NSL+HMY C ++ A ++F E+P RD+VSW+SII + GDV AH LFDEMP
Sbjct: 152 VLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMP 211
Query: 273 EKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGKSARLKEGMS 94
+KN++SWN++++ YL N PG + LFR+M+ GF N ++V +L ACG+SARLKEG S
Sbjct: 212 DKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRS 271
Query: 93 VHGLLIRKQWNLNLIMHTALVDMYSRCRKV 4
VH LIR N ++++ TAL+DMY +C++V
Sbjct: 272 VHASLIRTFLNSSVVIDTALIDMYGKCKEV 301
Score = 71.2 bits (173), Expect = 6e-10
Identities = 48/212 (22%), Positives = 89/212 (41%)
Frame = -3
Query: 711 GDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLL 532
GD+ +F ++ + I N +I AY +++ + + +M++ GF N T LL
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 531 NCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLV 352
N C R G+ H ++ + + I +LI MYG + + A R+F
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIF--------- 308
Query: 351 SWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEG 172
D + +N V+WNV++ + + P L+LF M+N
Sbjct: 309 ----------------------DSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 171 FMANARSVVSVLTACGKSARLKEGMSVHGLLI 76
+ + V VL C ++ + +G S + L++
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV 378
>ref|XP_006857380.1| hypothetical protein AMTR_s00067p00130250 [Amborella trichopoda]
gi|548861473|gb|ERN18847.1| hypothetical protein
AMTR_s00067p00130250 [Amborella trichopoda]
Length = 823
Score = 257 bits (657), Expect = 5e-66
Identities = 128/288 (44%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Frame = -3
Query: 855 NLLHRILDGLNHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNL--SSEMGDLNYTLVIF 682
+++ + L L+ C+T+ + Q+ A IT+G N P + L+ +S+ G L+Y L++F
Sbjct: 19 SVVKQALVSLDSCKTMREFKQLQAHTITNGLQNHPLLSTHLVKFLATSDSGCLSYALMVF 78
Query: 681 RDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAV 502
R +N + N +IKA S SSD IQ + FY +M+ G N+FTFPPL+ CA+
Sbjct: 79 RQLNSPELRAYNTIIKALSLSSDPIQAISFYHEMVLKGVHPNNFTFPPLVASCAKVTAIN 138
Query: 501 SGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALS 322
G+KCH + VKRGFD V+ + NSL+HMY CF++I A +VF EM +RD VSW+S+I
Sbjct: 139 EGEKCHTEVVKRGFDQVIFVANSLVHMYACFKLISYARQVFYEMVERDFVSWNSMINGHI 198
Query: 321 NVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVS 142
+GD+ A LFDEMPE+N +SWNV++ GY + PG LKLFR+M +G ++VS
Sbjct: 199 LLGDIMNARKLFDEMPERNQISWNVMIGGYARSGSPGHGLKLFREMQKKGIKGTITTMVS 258
Query: 141 VLTACGKSARLKEGMSVHGLLIR-KQWNLNLIMHTALVDMYSRCRKVE 1
+L AC KSARL EG SVH +IR + +I+ TALVDMY +C K++
Sbjct: 259 ILNACAKSARLLEGRSVHCYIIRSSSMDSGVILETALVDMYCKCGKLD 306
Score = 74.3 bits (181), Expect = 7e-11
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Frame = -3
Query: 714 MGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPL 535
+GD+ +F ++ ++I N +I Y+ S G+ + +M K G T +
Sbjct: 200 LGDIMNARKLFDEMPERNQISWNVMIGGYARSGSPGHGLKLFREMQKKGIKGTITTMVSI 259
Query: 534 LNCCARCGCAVSGQKCHGQAVKRG-FDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRD 358
LN CA+ + G+ H ++ D + + +L+ MY +++A RVF EMP+R+
Sbjct: 260 LNACAKSARLLEGRSVHCYIIRSSSMDSGVILETALVDMYCKCGKLDSAKRVFYEMPERN 319
Query: 357 LVSWHSIIGALSNVGDVRTAHHLFDEM 277
LVSW+++I + GD + A LFD M
Sbjct: 320 LVSWNAMIFGQAICGDYKEALALFDSM 346
>ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Cucumis sativus]
Length = 547
Score = 254 bits (649), Expect = 4e-65
Identities = 121/240 (50%), Positives = 165/240 (68%)
Frame = -3
Query: 723 SSEMGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTF 544
+SE GD+ YT++IFR I + + CVN +IKAYS S+ ++ V YF+ L G +S+TF
Sbjct: 92 ASEFGDIVYTVLIFRHIKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTF 151
Query: 543 PPLLNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPD 364
L + CA GC SG+KCHGQA K G D V+ + NSLIHMYGC + IE +VF EM
Sbjct: 152 LSLFSACASFGCGASGRKCHGQAFKNGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMST 211
Query: 363 RDLVSWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQM 184
+DLVSW+SI+ A + VGD+ TAH +FD MPE+N+VSWN++++ YL PG +KLFR M
Sbjct: 212 QDLVSWNSIVTAYARVGDLYTAHDMFDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNM 271
Query: 183 LNEGFMANARSVVSVLTACGKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKV 4
+N G N ++V+VL+AC +SARL EG SVHG + R + ++TALVDMYS+C +V
Sbjct: 272 VNVGIRGNNTTMVNVLSACSRSARLNEGRSVHGFMYRASMKFCVFINTALVDMYSKCHRV 331
>emb|CAB62654.1| putative protein [Arabidopsis thaliana]
Length = 486
Score = 215 bits (548), Expect = 2e-53
Identities = 107/240 (44%), Positives = 150/240 (62%)
Frame = -3
Query: 723 SSEMGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTF 544
SS GD +YT+ I+R I L C N + KAY SS Q + FYF +L+ GF +S+TF
Sbjct: 41 SSRFGDSSYTVSIYRSIGKL--YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTF 98
Query: 543 PPLLNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPD 364
L++C + C SG+ CHGQA+K G D VL ++NSL+HMY C ++ A ++F E+P
Sbjct: 99 VSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPK 158
Query: 363 RDLVSWHSIIGALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQM 184
RD+VSW+SII + GDV AH LFDEMP+KN++SWN++++ YL N PG + LFR+M
Sbjct: 159 RDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM 218
Query: 183 LNEGFMANARSVVSVLTACGKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKV 4
+ GF N ++V +L ACG+SARLKE AL+DMY +C++V
Sbjct: 219 VRAGFQGNESTLVLLLNACGRSARLKE---------------------ALIDMYGKCKEV 257
>ref|XP_002531149.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529262|gb|EEF31234.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 311
Score = 206 bits (523), Expect = 2e-50
Identities = 96/171 (56%), Positives = 128/171 (74%)
Frame = -3
Query: 513 GCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSII 334
GC SGQKCHGQ +K G D +L ++NSLIH YGC ++E A +VF EM DLVSW+SI+
Sbjct: 2 GCLQSGQKCHGQVLKNGVDCILPVQNSLIHFYGCCGLVELARKVFDEMSQADLVSWNSIV 61
Query: 333 GALSNVGDVRTAHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANAR 154
A +NVG++ TAH +F+ M K +VSWNV++ GYL+ N PG L LFR+M+N G N +
Sbjct: 62 NAYANVGELDTAHDIFNIMLGKTVVSWNVMIYGYLKGNNPGCSLMLFRKMVNSGLRGNDK 121
Query: 153 SVVSVLTACGKSARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
++VSVL+ACGKSARL EG S+HG LIR N ++I+ T+L+DMYS+C+KVE
Sbjct: 122 TMVSVLSACGKSARLTEGRSIHGFLIRTSLNFSVILLTSLMDMYSKCQKVE 172
>gb|EOY09680.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 626
Score = 191 bits (486), Expect = 3e-46
Identities = 102/280 (36%), Positives = 161/280 (57%), Gaps = 4/280 (1%)
Frame = -3
Query: 828 LNHCRTLAQLSQIHALQITSGCMNKPFFAAKLLNLSSEMGD----LNYTLVIFRDINILD 661
L C+ L+QL IH I + + F A++L++L ++ L+Y IF I +
Sbjct: 27 LESCKNLSQLKIIHGHMIRTHIIFDIFAASRLISLCTDPSFGTALLDYAFKIFSQIETPN 86
Query: 660 RICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFPPLLNCCARCGCAVSGQKCHG 481
NALIK +SA + Q FY Q+L+ ++ +FP L+ CA+ G + HG
Sbjct: 87 LFIFNALIKGFSACQNPHQSFHFYTQLLRANILPDNLSFPFLVRACAQLESLDMGIQAHG 146
Query: 480 QAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDRDLVSWHSIIGALSNVGDVRT 301
Q +K GF+ + ++NSL+HMY I+ A +FQ M ++VSW S+I L+ VGDV
Sbjct: 147 QIIKHGFESNVYVQNSLVHMYSTCGDIKAANAIFQRMTFLNVVSWTSMIAGLNKVGDVEM 206
Query: 300 AHHLFDEMPEKNMVSWNVLMTGYLENNMPGFVLKLFRQMLNEGFMANARSVVSVLTACGK 121
A LFD MPEKN+V+W+++++GY +N+ ++LF+ + EG AN +VSV+++C
Sbjct: 207 ARKLFDTMPEKNLVTWSIMISGYAKNSYFEKAVELFQVLQEEGVQANETVMVSVISSCAH 266
Query: 120 SARLKEGMSVHGLLIRKQWNLNLIMHTALVDMYSRCRKVE 1
++ G H + R +LN+I+ TALVDMY+RC +E
Sbjct: 267 LGAIELGEKAHEYIFRNNLSLNVILGTALVDMYARCGSIE 306
Score = 69.3 bits (168), Expect = 2e-09
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Frame = -3
Query: 720 SEMGDLNYTLVIFRDINILDRICVNALIKAYSASSDAIQGVVFYFQMLKVGFSANSFTFP 541
+++GD+ +F + + + + +I Y+ +S + V + + + G AN
Sbjct: 199 NKVGDVEMARKLFDTMPEKNLVTWSIMISGYAKNSYFEKAVELFQVLQEEGVQANETVMV 258
Query: 540 PLLNCCARCGCAVSGQKCHGQAVKRGFDDVLEIRNSLIHMYGCFEMIETATRVFQEMPDR 361
+++ CA G G+K H + + + +L+ MY IE A VF+E+P+R
Sbjct: 259 SVISSCAHLGAIELGEKAHEYIFRNNLSLNVILGTALVDMYARCGSIEKAIGVFEELPER 318
Query: 360 DLVSWHSIIGALSNVGDVRTAHHLFDEMPEKNM----VSWNVLMTGYLENNMPGFVLKLF 193
D++SW ++I L+ G A F EM + + +S+ +++ + G L+LF
Sbjct: 319 DVLSWTALIAGLAMHGYAERALWFFSEMVKSGLKPRDISFTAVLSACSHGGLVGKGLELF 378
Query: 192 RQMLNE-GFMANARSVVSVLTACGKSARLKE 103
M + G V+ G++ +L E
Sbjct: 379 GSMKRDFGIEPRLEHYGCVVDLLGRAGKLAE 409