BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00037047
         (314 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358601.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_004246180.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|5...    61   2e-07

>ref|XP_006358601.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum tuberosum]
          Length = 639

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/63 (61%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = -3

Query: 183 PKLWKDIDYASSESNPVNG-SQTLELNHPILLKLDSSTC-LNQFNQAHAQLLVLGLFQHP 10
           PKLW D D A S     NG   TL L+HPIL  LDS T  L QFNQ HAQL+V G+FQHP
Sbjct: 34  PKLWSDHDDAQSFDPYNNGVHSTLTLSHPILRILDSCTPKLRQFNQVHAQLIVSGIFQHP 93

Query: 9   LAA 1
           LAA
Sbjct: 94  LAA 96


>ref|XP_004246180.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 639

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/63 (60%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = -3

Query: 183 PKLWKDIDYASSESNPVNG-SQTLELNHPILLKLDSSTC-LNQFNQAHAQLLVLGLFQHP 10
           PKLW D D   S     NG   TL L+HPIL  LDS T  L QFNQ HAQL+V G+FQHP
Sbjct: 34  PKLWSDHDDVQSFDPYNNGVHSTLTLSHPILRILDSCTPKLRQFNQVHAQLIVSGIFQHP 93

Query: 9   LAA 1
           LAA
Sbjct: 94  LAA 96


>ref|XP_002329535.1| predicted protein [Populus trichocarpa]
           gi|566161603|ref|XP_006385604.1| hypothetical protein
           POPTR_0003s08540g [Populus trichocarpa]
           gi|550342733|gb|ERP63401.1| hypothetical protein
           POPTR_0003s08540g [Populus trichocarpa]
          Length = 617

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
 Frame = -3

Query: 186 PPKLWKDIDYASSESNPVNGSQ---TLELNHPILLKLDSS-TCLNQFNQAHAQLLVLGLF 19
           PPKL+ +       +  ++ S    TL+LNHPIL KL+ S T + QFNQ H QL VLGLF
Sbjct: 28  PPKLFPNDPTPQQITQTISNSSNAPTLDLNHPILQKLEQSCTNIKQFNQIHTQLTVLGLF 87

Query: 18  QHPLAA 1
           QHP AA
Sbjct: 88  QHPFAA 93