BLASTX nr result

ID: Rheum21_contig00036937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036937
         (330 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      92   5e-17

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 54/107 (50%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
 Frame = +1

Query: 16  YLDKFECALTRLSLSTTHALSIFLANMLPHLQMHVRQFNPTTLGEAARLAKLHESSLALT 195
           + +KFECA TRLSL   HALSIFL N+ PHL +  RQF  TT+ EAAR+AKLHES+L  T
Sbjct: 273 FWEKFECARTRLSLPMPHALSIFLTNLNPHLALQARQFKVTTVTEAARIAKLHESALLQT 332

Query: 196 PQK-SFRAPQNTFQPFTKQAYDP----QKTLPLLPGPETPKTPQNRP 321
           P K   RAP   F P++K    P      T  LLP P   + P+  P
Sbjct: 333 PTKPPQRAP---FSPYSKPNNQPYNKSSNTTALLPTPRFTENPKTLP 376


Top