BLASTX nr result
ID: Rheum21_contig00036778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036778
(288 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006301940.1| hypothetical protein CARUB_v10022418mg, part... 60 4e-07
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript... 59 5e-07
ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, part... 59 7e-07
ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Caps... 59 7e-07
ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, part... 59 7e-07
gb|EMJ14430.1| hypothetical protein PRUPE_ppb017383mg [Prunus pe... 58 1e-06
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe... 58 1e-06
dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like... 57 2e-06
ref|XP_006295736.1| hypothetical protein CARUB_v10024855mg [Caps... 57 2e-06
ref|XP_006287598.1| hypothetical protein CARUB_v10000810mg, part... 57 2e-06
ref|XP_006301503.1| hypothetical protein CARUB_v10021929mg, part... 57 2e-06
ref|XP_006282176.1| hypothetical protein CARUB_v10028438mg, part... 57 2e-06
ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, part... 57 3e-06
ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, part... 57 3e-06
ref|XP_006285413.1| hypothetical protein CARUB_v10006824mg [Caps... 57 3e-06
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7... 57 3e-06
ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, part... 56 4e-06
ref|XP_006596845.1| PREDICTED: uncharacterized protein At4g02000... 55 7e-06
gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebenne... 55 7e-06
ref|NP_178215.1| zinc ion binding / nucleic acid binding protein... 55 7e-06
>ref|XP_006301940.1| hypothetical protein CARUB_v10022418mg, partial [Capsella rubella]
gi|482570650|gb|EOA34838.1| hypothetical protein
CARUB_v10022418mg, partial [Capsella rubella]
Length = 493
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC----ISTGNSTKKTTN 168
VEVDL +PLKG+ IN RY++ YEG +IC CG +GH+ C + G ++T+
Sbjct: 226 VEVDLSQPLKGTVLINEERYYVSYEGLTNICSGCGMYGHLVHTCPRMRVEAGREARQTS- 284
Query: 169 GVTADEQNQTNGGSTNIGVG 228
++ + T G N GVG
Sbjct: 285 --PSESREVTTEGENNTGVG 302
>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 855
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANCIST 141
+EVDL KPLKG+ +NG RYF+ YEG +IC +CG +GH+ C T
Sbjct: 188 IEVDLAKPLKGTLLLNGERYFVSYEGLANICSRCGMYGHLIHTCPQT 234
>ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, partial [Capsella rubella]
gi|482565486|gb|EOA29675.1| hypothetical protein
CARUB_v10015822mg, partial [Capsella rubella]
Length = 333
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANCIS 138
VEVDL +PLKGS +NG RYF+ YEG +IC CG +GH+ C S
Sbjct: 210 VEVDLTQPLKGSVMVNGDRYFVSYEGLSNICSSCGLYGHLVNTCPS 255
>ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Capsella rubella]
gi|482565484|gb|EOA29673.1| hypothetical protein
CARUB_v10015820mg [Capsella rubella]
Length = 503
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEV+L KPLKGS ING RY++ YEG +IC CG FGH+ NC
Sbjct: 213 VEVNLSKPLKGSVMINGERYYVAYEGMSNICSGCGVFGHLVHNC 256
>ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, partial [Capsella rubella]
gi|482565360|gb|EOA29549.1| hypothetical protein
CARUB_v10015577mg, partial [Capsella rubella]
Length = 476
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEV+L KPLKGS ING RY++ YEG +IC CG FGH+ NC
Sbjct: 213 VEVNLSKPLKGSVMINGERYYVAYEGMSNICSGCGVFGHLVHNC 256
>gb|EMJ14430.1| hypothetical protein PRUPE_ppb017383mg [Prunus persica]
Length = 661
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC-ISTGNSTKKTTNGVT 177
VE+DL +PL+ IN + Y +EYEGF ICY CGR+GH +C + + +KT +G T
Sbjct: 304 VELDLSRPLEAFVQINNVWYNVEYEGFPDICYMCGRYGHKREHCDVPDAATVEKTGDGST 363
Query: 178 ADEQNQTNG 204
+ G
Sbjct: 364 LGDDGLVEG 372
>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
Length = 993
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC-ISTGNSTKKTTNGVT 177
VE+DL +PL+ IN + Y +EYEGF ICY CGR+GH +C + + +KT +G T
Sbjct: 304 VELDLSRPLEAFVQINNVWYNVEYEGFPDICYMCGRYGHKREHCDVPDAATVEKTGDGST 363
Query: 178 ADEQNQTNG 204
+ G
Sbjct: 364 LGDDGLVEG 372
>dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 591
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEVDL +PL+G+ +NG RY++ YEG +IC KCG +GH+ NC
Sbjct: 213 VEVDLKRPLQGALLVNGDRYYVAYEGLTNICSKCGIYGHLVHNC 256
>ref|XP_006295736.1| hypothetical protein CARUB_v10024855mg [Capsella rubella]
gi|482564444|gb|EOA28634.1| hypothetical protein
CARUB_v10024855mg [Capsella rubella]
Length = 479
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEVDL KPLKG+ ING RYF+ YEG IC CG +GH+ +C
Sbjct: 202 VEVDLRKPLKGAIMINGDRYFVSYEGLNSICSGCGVYGHLVHSC 245
>ref|XP_006287598.1| hypothetical protein CARUB_v10000810mg, partial [Capsella rubella]
gi|482556304|gb|EOA20496.1| hypothetical protein
CARUB_v10000810mg, partial [Capsella rubella]
Length = 493
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC----ISTGNSTKKTTN 168
VEVDL +PLKG IN RY++ YEG +IC CG +GH+ C + G ++T+
Sbjct: 226 VEVDLSQPLKGMVLINEERYYVSYEGLTNICSGCGMYGHLVHTCPRMRVEAGREARQTS- 284
Query: 169 GVTADEQNQTNGGSTNIGVG 228
++ + T G N G G
Sbjct: 285 --PSESREVTTEGENNTGAG 302
>ref|XP_006301503.1| hypothetical protein CARUB_v10021929mg, partial [Capsella rubella]
gi|482570213|gb|EOA34401.1| hypothetical protein
CARUB_v10021929mg, partial [Capsella rubella]
Length = 477
Score = 57.0 bits (136), Expect = 2e-06
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEV+L KPLKGS I+G RY++ YEG +IC CG FGH+ NC
Sbjct: 214 VEVNLSKPLKGSVMISGERYYVAYEGMSNICSGCGVFGHLVHNC 257
>ref|XP_006282176.1| hypothetical protein CARUB_v10028438mg, partial [Capsella rubella]
gi|482550880|gb|EOA15074.1| hypothetical protein
CARUB_v10028438mg, partial [Capsella rubella]
Length = 454
Score = 57.0 bits (136), Expect = 2e-06
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANCISTGNSTKKTTNGVTA 180
VEV+L KPLKG+ ING RYF+ YEG +IC +CG +GH C N + TA
Sbjct: 196 VEVNLAKPLKGTIRINGGRYFVSYEGLTNICSRCGLYGHPVHACPRGINDKE------TA 249
Query: 181 DEQNQTNGGSTNI---GVGSNPPEQQ 249
GGS + G G P +Q
Sbjct: 250 ANARDVQGGSEVVVKGGDGFTPVRRQ 275
>ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, partial [Capsella rubella]
gi|482568590|gb|EOA32779.1| hypothetical protein
CARUB_v10016088mg, partial [Capsella rubella]
Length = 340
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEVDL PLKG+ ING RYF+ YEG IC KCG +GH+ C
Sbjct: 213 VEVDLKNPLKGTILINGERYFVSYEGLTTICSKCGMYGHLVHAC 256
>ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, partial [Capsella rubella]
gi|482554312|gb|EOA18505.1| hypothetical protein
CARUB_v10007057mg, partial [Capsella rubella]
Length = 394
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANCISTGNSTKKTTNGVTA 180
VEV+L KPLKG+ ING RY++ YEG IC CG +GH+ +C ++ G+ A
Sbjct: 213 VEVNLKKPLKGTVMINGERYYVSYEGISTICSHCGLYGHLVHSCPKVA-QVREHDRGI-A 270
Query: 181 DEQNQTNG 204
EQ T+G
Sbjct: 271 CEQGHTSG 278
>ref|XP_006285413.1| hypothetical protein CARUB_v10006824mg [Capsella rubella]
gi|482554118|gb|EOA18311.1| hypothetical protein
CARUB_v10006824mg [Capsella rubella]
Length = 446
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEV+L KPLKGS ING RY++ YE +IC CG FGH+ NC
Sbjct: 190 VEVNLSKPLKGSVMINGERYYVAYESLSNICSGCGVFGHLVHNC 233
>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
gi|7268308|emb|CAB78602.1| hypothetical protein
[Arabidopsis thaliana]
Length = 655
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANCISTGNSTKKTTNGVTA 180
VEV+L PLKG+ +NG RYF+ YEG Q IC CG +GH NC +TT G
Sbjct: 228 VEVNLKNPLKGTLVVNGERYFVSYEGLQTICSLCGIYGHTVNNC-----PMGRTTQGSQR 282
Query: 181 DEQ 189
EQ
Sbjct: 283 SEQ 285
>ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, partial [Capsella rubella]
gi|482547819|gb|EOA12095.1| hypothetical protein
CARUB_v10016517mg, partial [Capsella rubella]
Length = 457
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VE++L KP+KGS ING RY++ YEG +IC CG +GH+ NC
Sbjct: 209 VEINLSKPVKGSVMINGDRYYVAYEGLSNICSGCGVYGHLVHNC 252
>ref|XP_006596845.1| PREDICTED: uncharacterized protein At4g02000-like [Glycine max]
Length = 546
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANCISTGNSTKKTTNGVTA 180
V++DL KP+ G + G Y +EYEG IC CG +GH+ C + + N TA
Sbjct: 246 VQIDLNKPVVGKVGLKGYWYKVEYEGLHRICSSCGCYGHLARECPTLAKTPMMVPNLTTA 305
Query: 181 DEQNQTNGGSTNIGV 225
D+Q + +T G+
Sbjct: 306 DDQKNLSAPATFNGL 320
>gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebennensis]
Length = 496
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
VEV+L +PLKG+ +NG RY++ YEG IC KCG +GH+ C
Sbjct: 206 VEVNLKRPLKGTVMVNGRRYYVSYEGLNAICSKCGMYGHLVHTC 249
>ref|NP_178215.1| zinc ion binding / nucleic acid binding protein [Arabidopsis
thaliana] gi|6598620|gb|AAF18653.1| hypothetical protein
[Arabidopsis thaliana] gi|330250297|gb|AEC05391.1| zinc
ion binding / nucleic acid binding protein [Arabidopsis
thaliana]
Length = 515
Score = 55.5 bits (132), Expect = 7e-06
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +1
Query: 1 VEVDLLKPLKGS*NINGIRYFLEYEGFQHICYKCGRFGHIDANC 132
+EV+L KPLKG+ ING RYF+ YEG IC CG +GH+ +C
Sbjct: 213 IEVNLAKPLKGTVLINGDRYFVAYEGLSKICSSCGIYGHLVHSC 256