BLASTX nr result
ID: Rheum21_contig00036749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036749
(301 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containi... 123 3e-26
ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containi... 123 3e-26
ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus... 120 1e-25
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi... 120 1e-25
ref|XP_006356525.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_004242257.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_003623648.1| Pentatricopeptide repeat-containing protein ... 120 2e-25
emb|CBI23541.3| unnamed protein product [Vitis vinifera] 120 2e-25
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
emb|CBI39641.3| unnamed protein product [Vitis vinifera] 119 3e-25
gb|ESW27697.1| hypothetical protein PHAVU_003G224100g [Phaseolus... 119 4e-25
ref|XP_004492592.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-25
ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus pe... 118 7e-25
ref|XP_006578628.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_006578631.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_001754449.1| predicted protein [Physcomitrella patens] gi... 117 2e-24
gb|EMJ11519.1| hypothetical protein PRUPE_ppa002162mg [Prunus pe... 117 2e-24
>ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 123 bits (308), Expect = 3e-26
Identities = 55/78 (70%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK Q L HSEKLA+A+G KIP MPIRVMKNLRVCGDCH K +KVTGR +++RD
Sbjct: 708 EEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRD 767
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DGSCSC+DYW
Sbjct: 768 ANRFHHFKDGSCSCRDYW 785
>ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 123 bits (308), Expect = 3e-26
Identities = 55/78 (70%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK Q L HSEKLA+A+G KIP MPIRVMKNLRVCGDCH K +KVTGR +++RD
Sbjct: 708 EEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRD 767
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DGSCSC+DYW
Sbjct: 768 ANRFHHFKDGSCSCRDYW 785
>ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 703
Score = 122 bits (306), Expect = 5e-26
Identities = 55/78 (70%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK Q L HSEKLAIA+G K+P MPIRVMKNLRVCGDCH+ K +KVTGR ++VRD
Sbjct: 626 EEKVQSLGYHSEKLAIAYGLLKVPQGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRD 685
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSC+DYW
Sbjct: 686 ANRFHHFKDGLCSCRDYW 703
>gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus vulgaris]
Length = 709
Score = 120 bits (302), Expect = 1e-25
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK L HSEKLA+A+G K+P MPIRVMKNLRVCGDCH+ K +KVTGR +++RD
Sbjct: 632 EEKTHSLGYHSEKLAVAYGLLKVPKGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 691
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSCKDYW
Sbjct: 692 ANRFHHFKDGHCSCKDYW 709
>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 120 bits (302), Expect = 1e-25
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK L HSEKLA+A+G K+P MPIRVMKNLRVCGDCH+ K +KVTGR +++RD
Sbjct: 634 EEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 693
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSCKDYW
Sbjct: 694 ANRFHHFKDGHCSCKDYW 711
>ref|XP_006356525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum tuberosum]
Length = 704
Score = 120 bits (301), Expect = 2e-25
Identities = 53/78 (67%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK LN HSEKLA+A+G K+P MPIRVMKNLRVCGDCH+ K +KVTGR +++RD
Sbjct: 627 EEKLHSLNYHSEKLAVAYGLLKLPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 686
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSCKD+W
Sbjct: 687 ANRFHHFKDGVCSCKDFW 704
>ref|XP_004242257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum lycopersicum]
Length = 1224
Score = 120 bits (300), Expect = 2e-25
Identities = 52/78 (66%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK LN HSEKLA+A+G K+P MPIR+MKNLRVCGDCH+ K +KVTGR +++RD
Sbjct: 1147 EEKLHSLNYHSEKLAVAYGLLKLPQGMPIRIMKNLRVCGDCHSAIKLIAKVTGREIILRD 1206
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSCKD+W
Sbjct: 1207 ANRFHHFKDGVCSCKDFW 1224
>ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 120 bits (300), Expect = 2e-25
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
E+KKQIL RHSEKLAIA+G ++P PIRV KNLRVCGDCH+ TKY S + GRV++VRD
Sbjct: 522 EQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRD 581
Query: 120 ARRFHHFVDGSCSCKDYW 67
RFHHF G CSC DYW
Sbjct: 582 TTRFHHFRQGECSCGDYW 599
>ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 707
Score = 120 bits (300), Expect = 2e-25
Identities = 52/78 (66%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK L HSE+LA+A+G K+P MPIRVMKNLRVCGDCH+ K +KVTGR +++RD
Sbjct: 630 EEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 689
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DGSCSCKD+W
Sbjct: 690 ANRFHHFKDGSCSCKDFW 707
>emb|CBI23541.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 120 bits (300), Expect = 2e-25
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
E+KKQIL RHSEKLAIA+G ++P PIRV KNLRVCGDCH+ TKY S + GRV++VRD
Sbjct: 308 EQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRD 367
Query: 120 ARRFHHFVDGSCSCKDYW 67
RFHHF G CSC DYW
Sbjct: 368 TTRFHHFRQGECSCGDYW 385
>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 119 bits (299), Expect = 3e-25
Identities = 51/78 (65%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK + L HSE+LA+AFG K+P MPIRVMKNLRVCGDCH+ K +K+TGR +++RD
Sbjct: 626 EEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRD 685
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSC+DYW
Sbjct: 686 ANRFHHFKDGFCSCRDYW 703
>emb|CBI39641.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 119 bits (299), Expect = 3e-25
Identities = 51/78 (65%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK + L HSE+LA+AFG K+P MPIRVMKNLRVCGDCH+ K +K+TGR +++RD
Sbjct: 174 EEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRD 233
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSC+DYW
Sbjct: 234 ANRFHHFKDGFCSCRDYW 251
>gb|ESW27697.1| hypothetical protein PHAVU_003G224100g [Phaseolus vulgaris]
Length = 643
Score = 119 bits (298), Expect = 4e-25
Identities = 53/78 (67%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
E K+QIL HSEKLAIAFG K+P+ +PIRV KNLRVCGDCH+ TKY S + GR ++VRD
Sbjct: 566 ELKEQILLWHSEKLAIAFGLLKVPSGVPIRVFKNLRVCGDCHSATKYISAIEGREIIVRD 625
Query: 120 ARRFHHFVDGSCSCKDYW 67
RFHHF DG CSC+DYW
Sbjct: 626 TSRFHHFKDGFCSCRDYW 643
>ref|XP_004492592.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cicer arietinum]
Length = 707
Score = 119 bits (297), Expect = 5e-25
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK L HSEKLA+A+G K+P MPIRVMKNLRVCGDCH+ K +KVTGR +++RD
Sbjct: 630 EEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 689
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSCKD+W
Sbjct: 690 ANRFHHFKDGYCSCKDFW 707
>ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Fragaria vesca subsp. vesca]
Length = 780
Score = 118 bits (296), Expect = 7e-25
Identities = 51/78 (65%), Positives = 60/78 (76%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK+ +L HSEKLA+AFG IPA PIRVMKNLRVC DCH KY SK+ GR +++RD
Sbjct: 703 EEKEHMLRHHSEKLAVAFGILSIPAGRPIRVMKNLRVCEDCHNAIKYISKIVGRTIILRD 762
Query: 120 ARRFHHFVDGSCSCKDYW 67
+ RFHHF +GSCSC DYW
Sbjct: 763 SNRFHHFSEGSCSCGDYW 780
>gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus persica]
Length = 631
Score = 118 bits (296), Expect = 7e-25
Identities = 53/78 (67%), Positives = 60/78 (76%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK L HSEKLAIA+G K+P MPIRVMKNLR+CGDCH+ K SKV GR V++RD
Sbjct: 554 EEKAHSLGYHSEKLAIAYGLLKVPQGMPIRVMKNLRICGDCHSAIKLISKVMGREVILRD 613
Query: 120 ARRFHHFVDGSCSCKDYW 67
A RFHHF DG CSC+DYW
Sbjct: 614 ANRFHHFKDGLCSCRDYW 631
>ref|XP_006578628.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like isoform X2 [Glycine max]
gi|571451096|ref|XP_003522381.2| PREDICTED:
pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like isoform X1 [Glycine max]
gi|571451098|ref|XP_006578629.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like isoform X3 [Glycine max]
gi|571451100|ref|XP_006578630.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like isoform X4 [Glycine max]
Length = 640
Score = 117 bits (294), Expect = 1e-24
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
E K+Q+L HSEKLAIAFG K+P +PIRV KNLRVCGDCH+ TKY S + GR ++VRD
Sbjct: 558 ELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRD 617
Query: 120 ARRFHHFVDGSCSCKDYW 67
RFHHF DG CSC+DYW
Sbjct: 618 TTRFHHFKDGFCSCRDYW 635
>ref|XP_006578631.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like isoform X5 [Glycine max]
gi|571451104|ref|XP_006578632.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like isoform X6 [Glycine max]
gi|571451106|ref|XP_006578633.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like isoform X7 [Glycine max]
Length = 635
Score = 117 bits (294), Expect = 1e-24
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
E K+Q+L HSEKLAIAFG K+P +PIRV KNLRVCGDCH+ TKY S + GR ++VRD
Sbjct: 558 ELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRD 617
Query: 120 ARRFHHFVDGSCSCKDYW 67
RFHHF DG CSC+DYW
Sbjct: 618 TTRFHHFKDGFCSCRDYW 635
>ref|XP_001754449.1| predicted protein [Physcomitrella patens]
gi|162694551|gb|EDQ80899.1| predicted protein
[Physcomitrella patens]
Length = 723
Score = 117 bits (293), Expect = 2e-24
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
E+K++IL HSE+LAI +G K P MPIR++KNLRVCGDCHT TK+ SKV GR ++ RD
Sbjct: 646 EQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARD 705
Query: 120 ARRFHHFVDGSCSCKDYW 67
A+RFHHF DG CSC D+W
Sbjct: 706 AQRFHHFADGVCSCGDFW 723
>gb|EMJ11519.1| hypothetical protein PRUPE_ppa002162mg [Prunus persica]
Length = 707
Score = 117 bits (292), Expect = 2e-24
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -2
Query: 300 EEKKQILNRHSEKLAIAFGHAKIPASMPIRVMKNLRVCGDCHTWTKYFSKVTGRVVVVRD 121
EEK+ +L HSEKLA+AFG IPA PIRV+KNLRVCGDCH KY SK+ GR +++RD
Sbjct: 630 EEKEHMLKYHSEKLAVAFGILSIPAGRPIRVIKNLRVCGDCHNAIKYISKIVGRTIILRD 689
Query: 120 ARRFHHFVDGSCSCKDYW 67
+ RFHHF G+CSC DYW
Sbjct: 690 SHRFHHFSGGNCSCGDYW 707