BLASTX nr result
ID: Rheum21_contig00036544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00036544
(290 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325850.1| RNA recognition motif-containing family prot... 65 7e-09
gb|EXB31241.1| hypothetical protein L484_014722 [Morus notabilis] 64 2e-08
ref|XP_006443457.1| hypothetical protein CICLE_v10021716mg [Citr... 63 5e-08
gb|EMJ03612.1| hypothetical protein PRUPE_ppa009644mg [Prunus pe... 62 6e-08
gb|EMJ03611.1| hypothetical protein PRUPE_ppa009644mg [Prunus pe... 62 6e-08
ref|XP_002525721.1| nucleic acid binding protein, putative [Rici... 62 8e-08
ref|XP_004288403.1| PREDICTED: uncharacterized protein LOC101310... 62 1e-07
ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246... 61 2e-07
gb|EOY10556.1| Nucleic acid binding protein, putative isoform 2 ... 60 2e-07
gb|EOY10555.1| RNA binding family protein isoform 1 [Theobroma c... 60 2e-07
ref|XP_004249088.1| PREDICTED: uncharacterized protein LOC101253... 60 2e-07
ref|XP_003624658.1| Protein vip1 [Medicago truncatula] gi|871626... 60 3e-07
ref|XP_003624657.1| Protein vip1 [Medicago truncatula] gi|355499... 60 3e-07
ref|XP_002319148.1| RNA recognition motif-containing family prot... 60 4e-07
ref|XP_002868391.1| RNA recognition motif-containing protein [Ar... 59 5e-07
ref|NP_568522.1| RNA recognition motif (RRM)-containing protein ... 59 7e-07
ref|XP_006364740.1| PREDICTED: uncharacterized protein LOC102595... 59 7e-07
ref|XP_006364739.1| PREDICTED: uncharacterized protein LOC102595... 59 7e-07
gb|AFK38631.1| unknown [Medicago truncatula] 58 1e-06
gb|ACJ84770.1| unknown [Medicago truncatula] 58 1e-06
>ref|XP_002325850.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222862725|gb|EEF00232.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 274
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I RE+G++K AFVTFK+ KALEIALLLS ATLVDRIVTI+ +N V+ E + V
Sbjct: 40 IQRENGQSKTAFVTFKDPKALEIALLLSGATLVDRIVTITPAENYVLNRELQEV 93
>gb|EXB31241.1| hypothetical protein L484_014722 [Morus notabilis]
Length = 450
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
I E G++K AFVTFK+ KALEIALLLS AT+VD+IV+IS V+N V K E E RVVD
Sbjct: 210 IRSEPGQSKTAFVTFKDPKALEIALLLSGATIVDQIVSISPVENYVSKCEMQEVRVVD 267
>ref|XP_006443457.1| hypothetical protein CICLE_v10021716mg [Citrus clementina]
gi|568850910|ref|XP_006479139.1| PREDICTED:
uncharacterized protein LOC102628737 [Citrus sinensis]
gi|557545719|gb|ESR56697.1| hypothetical protein
CICLE_v10021716mg [Citrus clementina]
Length = 266
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +2
Query: 11 ESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
E G++K AFVTFK+ KALEIALLLS AT+VD+IV+I+ +N V KPE + V
Sbjct: 39 EYGQSKTAFVTFKDAKALEIALLLSGATIVDQIVSITPAENYVPKPESQEV 89
>gb|EMJ03612.1| hypothetical protein PRUPE_ppa009644mg [Prunus persica]
Length = 283
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
I RE G++K AFVTFK+ KALEIALLLS AT+VD+IV IS V+N V K + E R+V+
Sbjct: 38 IQREPGQSKTAFVTFKDPKALEIALLLSGATIVDQIVIISPVENYVPKTDVLEVRMVE 95
>gb|EMJ03611.1| hypothetical protein PRUPE_ppa009644mg [Prunus persica]
Length = 272
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
I RE G++K AFVTFK+ KALEIALLLS AT+VD+IV IS V+N V K + E R+V+
Sbjct: 38 IQREPGQSKTAFVTFKDPKALEIALLLSGATIVDQIVIISPVENYVPKTDVLEVRMVE 95
>ref|XP_002525721.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535021|gb|EEF36704.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 249
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE 151
I RE+GE++ AFVTFK+ KALEIALLLS AT+VD+IV+I+ V+N V K E
Sbjct: 37 IVRENGESRTAFVTFKDPKALEIALLLSGATIVDKIVSITPVENYVPKRE 86
>ref|XP_004288403.1| PREDICTED: uncharacterized protein LOC101310061 [Fragaria vesca
subsp. vesca]
Length = 277
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I RE ++K AFVTFK+ KALEIALLLS AT+VD+IVTIS V+N V E + +
Sbjct: 35 IQREPAQSKTAFVTFKDAKALEIALLLSGATMVDQIVTISPVENYVPIDETQEI 88
>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
gi|296089289|emb|CBI39061.3| unnamed protein product
[Vitis vinifera]
Length = 268
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEE 157
I R+SG+ + AFVTFK+ KALEIALLLS AT+VD++VTI+ V+N V E E
Sbjct: 35 ILRDSGQLRTAFVTFKDPKALEIALLLSGATIVDQVVTITPVENYVPTAERE 86
>gb|EOY10556.1| Nucleic acid binding protein, putative isoform 2 [Theobroma cacao]
Length = 269
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Frame = +2
Query: 11 ESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
E G++K+A+VTFK+ KALEIALLLS AT+VD+IV I+ +N + KPE E R D
Sbjct: 38 EPGQSKIAYVTFKDPKALEIALLLSGATIVDKIVVITCAENYLPKPEIHEARTAD 92
>gb|EOY10555.1| RNA binding family protein isoform 1 [Theobroma cacao]
Length = 236
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Frame = +2
Query: 11 ESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
E G++K+A+VTFK+ KALEIALLLS AT+VD+IV I+ +N + KPE E R D
Sbjct: 38 EPGQSKIAYVTFKDPKALEIALLLSGATIVDKIVVITCAENYLPKPEIHEARTAD 92
>ref|XP_004249088.1| PREDICTED: uncharacterized protein LOC101253037 [Solanum
lycopersicum]
Length = 273
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
I RE G++K AFVTFK+ KALEIALLLS AT+VD+IV+I ++ V E E R+VD
Sbjct: 36 IRREQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVSIKQAEDYVPSSETREVRIVD 93
>ref|XP_003624658.1| Protein vip1 [Medicago truncatula] gi|87162638|gb|ABD28433.1|
RNA-binding region RNP-1 (RNA recognition motif)
[Medicago truncatula] gi|355499673|gb|AES80876.1|
Protein vip1 [Medicago truncatula]
Length = 265
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I RE G+ K AFVTFK+ +ALEIALLLS AT+VD+IV+IS V+N V E + V
Sbjct: 35 IVREYGKPKTAFVTFKDPRALEIALLLSGATIVDQIVSISPVENYVANRETQEV 88
>ref|XP_003624657.1| Protein vip1 [Medicago truncatula] gi|355499672|gb|AES80875.1|
Protein vip1 [Medicago truncatula]
Length = 267
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I RE G+ K AFVTFK+ +ALEIALLLS AT+VD+IV+IS V+N V E + V
Sbjct: 37 IVREYGKPKTAFVTFKDPRALEIALLLSGATIVDQIVSISPVENYVANRETQEV 90
>ref|XP_002319148.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222857524|gb|EEE95071.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 269
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I R+ G++K AFVTFK+ KALEIALLLS AT+VD+IV I+ V+N V E + V
Sbjct: 35 IQRDHGQSKTAFVTFKDPKALEIALLLSGATIVDQIVAITPVENYVPNRELQEV 88
>ref|XP_002868391.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297314227|gb|EFH44650.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
I +E G++++AFVTF + KALEIALLLS AT+VD+IVTI+ +N V + E E R+VD
Sbjct: 36 IQKEVGQSRIAFVTFTDPKALEIALLLSGATIVDQIVTITRAENHVQRREMQEVRMVD 93
>ref|NP_568522.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana] gi|21593919|gb|AAM65884.1| unknown
[Arabidopsis thaliana] gi|26450493|dbj|BAC42360.1|
unknown protein [Arabidopsis thaliana]
gi|28973403|gb|AAO64026.1| putative RRM-containing
protein [Arabidopsis thaliana]
gi|332006499|gb|AED93882.1| RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
Length = 267
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I +E G++++AFVTF + KALEIALLLS AT+VD+IVTI+ +N V + E + V
Sbjct: 36 IQKEFGQSRIAFVTFTDPKALEIALLLSGATIVDQIVTITRAENYVQRRETQEV 89
>ref|XP_006364740.1| PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum
tuberosum]
Length = 273
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
I RE G++K AFVTFK+ KALEIALLLS AT+VD+IV I+ ++ V E E R+VD
Sbjct: 36 IRREQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVNITQEEDYVPSSETREVRLVD 93
>ref|XP_006364739.1| PREDICTED: uncharacterized protein LOC102595744 isoform X1 [Solanum
tuberosum]
Length = 274
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPE--EERVVD 169
I RE G++K AFVTFK+ KALEIALLLS AT+VD+IV I+ ++ V E E R+VD
Sbjct: 36 IRREQGQSKTAFVTFKDPKALEIALLLSGATIVDQIVNITQEEDYVPSSETREVRLVD 93
>gb|AFK38631.1| unknown [Medicago truncatula]
Length = 265
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I RE G+ K AFVTFK+ +ALEIALLLS A +VD+IV+IS V+N V E + V
Sbjct: 35 IVREYGKPKTAFVTFKDPRALEIALLLSGAAIVDQIVSISPVENYVANRETQEV 88
>gb|ACJ84770.1| unknown [Medicago truncatula]
Length = 217
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2
Query: 2 IHRESGEAKMAFVTFKETKALEIALLLSDATLVDRIVTISLVDN*VVKPEEERV 163
I RE G+ K AFVTFK+ +ALEIALLLS A +VD+IV+IS V+N V E + V
Sbjct: 35 IVREYGKPKTAFVTFKDPRALEIALLLSGAAIVDQIVSISPVENYVANRETQEV 88