BLASTX nr result

ID: Rheum21_contig00036179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00036179
         (404 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGV29485.1| putative NAC domain class transcription factor, p...    72   1e-10
ref|XP_004493788.1| PREDICTED: NAC domain-containing protein 21/...    61   2e-07
ref|XP_002307652.1| hypothetical protein POPTR_0005s24750g [Popu...    59   5e-07
gb|EMJ03068.1| hypothetical protein PRUPE_ppa009628mg [Prunus pe...    58   1e-06
ref|XP_006443820.1| hypothetical protein CICLE_v10021312mg [Citr...    57   3e-06
ref|XP_002300772.2| hypothetical protein POPTR_0002s03830g [Popu...    55   7e-06

>gb|AGV29485.1| putative NAC domain class transcription factor, partial [Tamarix
           hispida]
          Length = 328

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
 Frame = +2

Query: 2   PPKEDWVLCRVFNKSK----EENNT------HHN-LDLLETN----------IXXXXXXX 118
           PPKEDWVLCRVF+K K     +N+T      HHN L +LETN          +       
Sbjct: 132 PPKEDWVLCRVFHKGKGSETNQNDTVDHDHYHHNQLHILETNHNAGSSSPTLVAASPPTK 191

Query: 119 XXXXXAVEKPTMPNCGYQRSDSFTSNPPSQIQIQTQIAQNPNDIDSTPMLNL------GA 280
                    PT+    +Q+S +    P S I   TQ  Q+ N+I+ +  L++        
Sbjct: 192 PVAADYSSMPTIYGSHHQQSHAIML-PNSSIPPSTQQNQSLNNINQSTPLDMALLTAAAP 250

Query: 281 NFLQLLNEGNLTKSYSINDMLMDSSTHDDHHEVDDEYGFMW 403
           N  Q L EGN T +YS +DM+M SS +D++ + D  YG +W
Sbjct: 251 NLFQFLKEGN-TNNYSFSDMIM-SSKNDNYDDHDHGYGLLW 289


>ref|XP_004493788.1| PREDICTED: NAC domain-containing protein 21/22-like [Cicer
           arietinum]
          Length = 291

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 48/137 (35%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   PPKEDWVLCRVFNKSKEENNTHHNLDLLETNIXXXXXXXXXXXXAVEKP---TMPNCGYQ 172
           PPKEDWVLCRVF+KSKE+NN ++N   + T              A   P   TMP+  Y 
Sbjct: 143 PPKEDWVLCRVFHKSKEDNNNNNN-SKINTQQLMYETTHPSLTLASSSPTNQTMPSV-YN 200

Query: 173 RSDSFTSNPPSQIQIQTQIAQNPNDIDSTPMLNLGANFLQLLNEGNLTKSYSINDMLMDS 352
           R DSF+S+      + T     PN  +S+ M         LL+    T   + N  +   
Sbjct: 201 RIDSFSSS------MTTLHHLIPNQNNSSMM--------NLLHYSRDTNPNNNNSTITQI 246

Query: 353 STHDDHHEVDDEYGFMW 403
           S+  DH    D YGF+W
Sbjct: 247 SSKGDH----DGYGFLW 259


>ref|XP_002307652.1| hypothetical protein POPTR_0005s24750g [Populus trichocarpa]
           gi|222857101|gb|EEE94648.1| hypothetical protein
           POPTR_0005s24750g [Populus trichocarpa]
          Length = 285

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
 Frame = +2

Query: 5   PKEDWVLCRVFNKSK-EENNTHHNLDLL-ETNIXXXXXXXXXXXXAVEKPTMPNCGYQRS 178
           PKEDWVLCRVF+K K E+ N   +  L+ ET              + +  T+P CGYQ+ 
Sbjct: 144 PKEDWVLCRVFHKCKAEDYNAKFSPQLMFETTTSSGTVNLAASPLSTDHQTLP-CGYQQM 202

Query: 179 DSFTSNPPSQIQIQTQIA--------QNPNDIDSTPMLNLGANFLQLLNEGNLTKSYSIN 334
            S +SNPP Q Q Q+ +         +N N   ST + +   +    L +    +  S+ 
Sbjct: 203 TSLSSNPPHQNQDQSSLLNLLQLSQDRNANPNISTDISSKAVDDYAFLWDDMNLEETSLG 262

Query: 335 DMLMDSSTHDDHHEVD 382
           D ++ S+  D   E+D
Sbjct: 263 DGVLASNLEDMRFEID 278


>gb|EMJ03068.1| hypothetical protein PRUPE_ppa009628mg [Prunus persica]
          Length = 284

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 48/137 (35%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   PPKEDWVLCRVFNKSKEENNTH---HNLDLLETNIXXXXXXXXXXXXAVEKPTMPNCGYQ 172
           PPKEDWVLCRVF+K K E NT    H+  L  T+               +  TMP  GY 
Sbjct: 143 PPKEDWVLCRVFHKGKGEENTKLSPHDFMLETTSCTIPLSMEKYSSPPTQDQTMPR-GYN 201

Query: 173 RSDSFTSNPPSQIQIQTQIAQNPNDIDSTPMLNLGANFLQLLNEGNLTKSYSINDMLMDS 352
           +  SF++ PP     Q           S  +LNL    LQ   E      YS N      
Sbjct: 202 QMPSFSTPPPRHSHNQ-----------SNSLLNL----LQFPQE-----KYSNN------ 235

Query: 353 STHDDHHEVDDEYGFMW 403
           S  +   + DDEYGF+W
Sbjct: 236 SVPELGAKNDDEYGFLW 252


>ref|XP_006443820.1| hypothetical protein CICLE_v10021312mg [Citrus clementina]
           gi|568851693|ref|XP_006479521.1| PREDICTED: NAC
           domain-containing protein 21/22-like [Citrus sinensis]
           gi|557546082|gb|ESR57060.1| hypothetical protein
           CICLE_v10021312mg [Citrus clementina]
          Length = 306

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
 Frame = +2

Query: 2   PPKEDWVLCRVFNKSKEENNTHHNLDLLETNIXXXXXXXXXXXXAVEKPTMPNC------ 163
           PPKEDWVLCRVF+KSK EN+ + +   +  +             A   P   +C      
Sbjct: 143 PPKEDWVLCRVFHKSKGENSENLSPQFIYESAANNNASSFTPSAA--SPPTADCRMINMP 200

Query: 164 -GYQRSDSFTSNPPSQIQIQTQIAQNPNDIDSTPMLNLGANFLQLLNEGNLTKSYSINDM 340
            GY +    +S+ P          +N N+  S  MLNL   F    ++ N  K+ S ND+
Sbjct: 201 FGYHQQQHISSSAPGSY-------RNHNNQSSNSMLNL-LQFPTSQDQKNNNKNQS-NDI 251

Query: 341 LMDSSTHDDHHEVDDEYGFMW 403
           +   S        DD+YGF+W
Sbjct: 252 ISSKSN-------DDDYGFIW 265


>ref|XP_002300772.2| hypothetical protein POPTR_0002s03830g [Populus trichocarpa]
           gi|550344223|gb|EEE80045.2| hypothetical protein
           POPTR_0002s03830g [Populus trichocarpa]
          Length = 228

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 45/134 (33%), Positives = 59/134 (44%)
 Frame = +2

Query: 2   PPKEDWVLCRVFNKSKEENNTHHNLDLLETNIXXXXXXXXXXXXAVEKPTMPNCGYQRSD 181
           PPKEDWVLCRVF+KSK E++T    +   T                +  T+   GYQ+  
Sbjct: 91  PPKEDWVLCRVFHKSKAEDSTRFMFE--STTDSGSTVNLTASPFTADHQTLAR-GYQQMI 147

Query: 182 SFTSNPPSQIQIQTQIAQNPNDIDSTPMLNLGANFLQLLNEGNLTKSYSINDMLMDSSTH 361
           S +S PP Q              D T +LNL    LQL  + N       +   MD+   
Sbjct: 148 SLSSTPPHQ--------------DQTSLLNL----LQLSQDRN-------SKYPMDT--- 179

Query: 362 DDHHEVDDEYGFMW 403
           D   +  DEYGF+W
Sbjct: 180 DISSKAVDEYGFLW 193


Top