BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035876
         (242 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citr...    88   1e-15
gb|EMJ28156.1| hypothetical protein PRUPE_ppa002695mg [Prunus pe...    87   2e-15
emb|CBI27249.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
gb|EOY01788.1| Pentatricopeptide repeat superfamily protein [The...    82   7e-14
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    81   1e-13
ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_002316102.2| pentatricopeptide repeat-containing family p...    72   8e-11
gb|ESW30612.1| hypothetical protein PHAVU_002G167800g [Phaseolus...    68   1e-09
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar...    59   9e-07
ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Caps...    56   4e-06

>ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 709

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = -2

Query: 238 DPDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRK 59
           +PD YS++VMIRWYFLN+++ + +  Y+C+RK L+E D  +FS VLKACCELRD+ EG K
Sbjct: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167

Query: 58  EYC 50
            +C
Sbjct: 168 VHC 170


>ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citrus clementina]
           gi|557540977|gb|ESR52021.1| hypothetical protein
           CICLE_v10033606mg [Citrus clementina]
          Length = 716

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = -2

Query: 238 DPDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRK 59
           +PD YS++VMIRWYFLN+++ + +  Y+C+RK L+E D  +FS VLKACCELRD+ EG K
Sbjct: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167

Query: 58  EYC 50
            +C
Sbjct: 168 VHC 170


>gb|EMJ28156.1| hypothetical protein PRUPE_ppa002695mg [Prunus persica]
          Length = 644

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 37/62 (59%), Positives = 48/62 (77%)
 Frame = -2

Query: 235 PDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRKE 56
           PD YS+KVM+RWYF++ ++AE +  Y  +R C+RE D V+FSIVLKAC ELRD  EGRK 
Sbjct: 45  PDFYSWKVMLRWYFMHNLYAEVMGFYTSMRICVREHDNVVFSIVLKACSELRDFNEGRKV 104

Query: 55  YC 50
           +C
Sbjct: 105 HC 106


>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = -2

Query: 238 DPDLYSYKVMIRWYFLNEMHAETLTLYRC-LRKCLRESDYVIFSIVLKACCELRDLREGR 62
           +PDLYS+KVMIRWYFLN+ ++E +  Y   LRKCL E D V+FSIVLKAC ELR+  EGR
Sbjct: 146 NPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGR 205

Query: 61  KEYC 50
           K +C
Sbjct: 206 KLHC 209


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = -2

Query: 238 DPDLYSYKVMIRWYFLNEMHAETLTLYRC-LRKCLRESDYVIFSIVLKACCELRDLREGR 62
           +PDLYS+KVMIRWYFLN+ ++E +  Y   LRKCL E D V+FSIVLKAC ELR+  EGR
Sbjct: 99  NPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGR 158

Query: 61  KEYC 50
           K +C
Sbjct: 159 KLHC 162


>gb|EOY01788.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 714

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 36/63 (57%), Positives = 47/63 (74%)
 Frame = -2

Query: 238 DPDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRK 59
           DPD YS+KVMIRWYFLN++  E +  Y  +R  +R  D V+FS+VLKAC E+RD+ EGRK
Sbjct: 114 DPDFYSWKVMIRWYFLNDLCMEIIGFYARMRMSVRMCDNVVFSVVLKACSEMRDIDEGRK 173

Query: 58  EYC 50
            +C
Sbjct: 174 VHC 176


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 34/63 (53%), Positives = 47/63 (74%)
 Frame = -2

Query: 238  DPDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRK 59
            +PD Y++KVMIRWYFLN++  + +  Y  +R   RE D +IFSI+LKAC ELR++ EGRK
Sbjct: 1180 NPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRK 1239

Query: 58   EYC 50
             +C
Sbjct: 1240 VHC 1242


>ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 706

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = -2

Query: 235 PDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRKE 56
           PD YS K M+RWYFL+ ++ E L L+R +R  +RE D V++SIVLKAC E RD+ EGRK 
Sbjct: 110 PDFYSSKAMVRWYFLHNLYGEVLGLFRRMRMWVRERDNVVYSIVLKACSEARDVNEGRKV 169

Query: 55  YC-ILQYSC 32
           +C I++ +C
Sbjct: 170 HCEIVKAAC 178


>ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 597

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 32/55 (58%), Positives = 43/55 (78%)
 Frame = -2

Query: 214 VMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRKEYC 50
           VMIRWYFLN+++ + +  Y+C+RK L+E D  +FS VLKACCELRD+ EG K +C
Sbjct: 4   VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 58


>ref|XP_002316102.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329982|gb|EEF02273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 665

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = -2

Query: 235 PDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRKE 56
           PD  S+KV+IRWYFLN    + +  Y  +R CL+E D V+FS VLKAC E R+  EGRK 
Sbjct: 66  PDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKV 125

Query: 55  YC 50
           +C
Sbjct: 126 HC 127


>gb|ESW30612.1| hypothetical protein PHAVU_002G167800g [Phaseolus vulgaris]
          Length = 702

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
 Frame = -2

Query: 232 DLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRES--DYVIFSIVLKACCELRDLREGRK 59
           DLYS+KVMIR YFLN+ H+  +++YR +R  L  +  D+V+FS+VLK+C E RDL +   
Sbjct: 99  DLYSFKVMIRTYFLNDHHSSVVSVYRLMRLSLHPTPHDHVLFSVVLKSCAETRDLLQAAL 158

Query: 58  EYCILQYS 35
            +C L  S
Sbjct: 159 THCHLTKS 166


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
 Frame = -2

Query: 232 DLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRES--DYVIFSIVLKACCELRDLREGRK 59
           DLY +KVMIR YFLN+  +  ++LYR +R  L  +  DYV+FSIV K+C E RD +    
Sbjct: 95  DLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTI 154

Query: 58  EYC----ILQYSCWLLICFKEA 5
            +C     L    ++L C  +A
Sbjct: 155 THCHFVKSLPSDSFVLTCLVDA 176


>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
           gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
           thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/65 (46%), Positives = 40/65 (61%)
 Frame = -2

Query: 238 DPDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRK 59
           +PD Y +KVM+R Y LN+   E + LY  L K     D ++FS  LKAC EL+DL  G+K
Sbjct: 104 EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163

Query: 58  EYCIL 44
            +C L
Sbjct: 164 IHCQL 168


>ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Capsella rubella]
           gi|482561043|gb|EOA25234.1| hypothetical protein
           CARUB_v10018547mg [Capsella rubella]
          Length = 701

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -2

Query: 238 DPDLYSYKVMIRWYFLNEMHAETLTLYRCLRKCLRESDYVIFSIVLKACCELRDLREGRK 59
           +PD YS+KVM+R Y LN    E +  Y  + +     D ++FS  LKAC EL+DL  G+K
Sbjct: 109 EPDFYSWKVMLRCYCLNNESLEIINFYDSMIEHGFRYDDIVFSKALKACTELQDLESGKK 168

Query: 58  EYC 50
            +C
Sbjct: 169 IHC 171