BLASTX nr result

ID: Rheum21_contig00035859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035859
         (306 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531248.1| mixed-lineage leukemia protein, putative [Ri...    48   8e-07

>ref|XP_002531248.1| mixed-lineage leukemia protein, putative [Ricinus communis]
           gi|223529167|gb|EEF31145.1| mixed-lineage leukemia
           protein, putative [Ricinus communis]
          Length = 344

 Score = 47.8 bits (112), Expect(2) = 8e-07
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -2

Query: 200 KQHTELWNKQQQTGKFKIVARDEH 129
           K HTELW KQQ+TGKFKIVAR+EH
Sbjct: 319 KTHTELWKKQQRTGKFKIVAREEH 342



 Score = 30.8 bits (68), Expect(2) = 8e-07
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 291 VPCALNRGFCI*YIQGSSSRGMDIIHGFCK 202
           V C LN+ FC  Y +G    G  I+ GFCK
Sbjct: 291 VTCGLNQDFCFEYKEGRKKEG-TIVAGFCK 319


Top