BLASTX nr result

ID: Rheum21_contig00035756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035756
         (406 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236184.1| PREDICTED: uncharacterized protein LOC101244...    56   4e-08
ref|XP_006477529.1| PREDICTED: uncharacterized protein LOC102625...    53   3e-07
ref|XP_006367060.1| PREDICTED: uncharacterized protein LOC102578...    53   4e-07
ref|XP_006439677.1| hypothetical protein CICLE_v10019515mg [Citr...    51   6e-07
gb|EOY21667.1| Nodulin / Major Facilitator Superfamily protein [...    54   4e-06
emb|CBI15294.3| unnamed protein product [Vitis vinifera]               51   8e-06

>ref|XP_004236184.1| PREDICTED: uncharacterized protein LOC101244171 [Solanum
           lycopersicum]
          Length = 560

 Score = 56.2 bits (134), Expect(2) = 4e-08
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   VSLFKDLDVNFGIL--YTFAVHNCPRHHLFGSPQLVIIAGSI*CFLGFFLTWLTVTSTIR 175
           VS+FKD+  N GIL    ++     R   FG P +V++AG+I CF G++L WLTV   + 
Sbjct: 59  VSVFKDVGANVGILSGLLYSSVTTRRRRRFGGPWVVLLAGAIQCFAGYYLMWLTVMGLLP 118

Query: 176 QPPFVVV 196
           +PP  V+
Sbjct: 119 KPPLWVM 125



 Score = 26.6 bits (57), Expect(2) = 4e-08
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 LTFFNIADVVTVVTNLKGFR 255
           +TFFN A+VVT V N   +R
Sbjct: 136 MTFFNTANVVTAVHNFPNYR 155


>ref|XP_006477529.1| PREDICTED: uncharacterized protein LOC102625351 [Citrus sinensis]
          Length = 1132

 Score = 53.1 bits (126), Expect(2) = 3e-07
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
 Frame = +2

Query: 2   VSLFKDLDVNFG----ILYTFAVHNCPRHHL-------FGSPQLVIIAGSI*CFLGFFLT 148
           VS+FKD+  N G    +LYT++  +   HH        F  P +V++AG+I CF G+FL 
Sbjct: 626 VSVFKDIGANTGTLSGVLYTYSTSDHSSHHPRQQRRTPFLGPWVVLLAGAIQCFAGYFLM 685

Query: 149 WLTVTSTIRQPPFVVV 196
           W +V     +PP  VV
Sbjct: 686 WASVVGLFPRPPVPVV 701



 Score = 26.6 bits (57), Expect(2) = 3e-07
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 193 GLTFFNIADVVTVVTNLKGF 252
           G+ FFN ADVVT V N   +
Sbjct: 711 GMNFFNTADVVTSVRNFPSY 730


>ref|XP_006367060.1| PREDICTED: uncharacterized protein LOC102578528 [Solanum tuberosum]
          Length = 559

 Score = 52.8 bits (125), Expect(2) = 4e-07
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   VSLFKDLDVNFGILYTFAVHNCP-RHHLFGSPQLVIIAGSI*CFLGFFLTWLTVTSTIRQ 178
           VS+FKD+  N GIL      +   R    G P +V++AG+I CF G++L WLTV   + +
Sbjct: 59  VSVFKDVGANVGILSGLLYSSVTGRRRRCGGPWVVLLAGAIQCFAGYYLMWLTVMGLLPK 118

Query: 179 PPFVVV 196
           PP  V+
Sbjct: 119 PPLWVM 124



 Score = 26.6 bits (57), Expect(2) = 4e-07
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 LTFFNIADVVTVVTNLKGFR 255
           +TFFN A+VVT V N   +R
Sbjct: 135 MTFFNTANVVTAVHNFPNYR 154


>ref|XP_006439677.1| hypothetical protein CICLE_v10019515mg [Citrus clementina]
           gi|557541939|gb|ESR52917.1| hypothetical protein
           CICLE_v10019515mg [Citrus clementina]
          Length = 564

 Score = 51.2 bits (121), Expect(2) = 6e-07
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
 Frame = +2

Query: 2   VSLFKDLDVNFG----ILYTFAVHNCPRHH--------LFGSPQLVIIAGSI*CFLGFFL 145
           VS+FKD+  N G    +LYT++  +   HH        L G P +V++ G+I CF G+FL
Sbjct: 53  VSVFKDIGANTGTLSGVLYTYSTSDHSSHHPRQQRLTRLLG-PWVVLLVGAIQCFAGYFL 111

Query: 146 TWLTVTSTIRQPPFVVV 196
            W +V   I +PP  V+
Sbjct: 112 MWASVVGLIPRPPVPVM 128



 Score = 27.7 bits (60), Expect(2) = 6e-07
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 193 GLTFFNIADVVTVVTN 240
           G+TFFN ADVVT V N
Sbjct: 138 GMTFFNTADVVTSVRN 153


>gb|EOY21667.1| Nodulin / Major Facilitator Superfamily protein [Theobroma cacao]
          Length = 556

 Score = 53.9 bits (128), Expect(2) = 4e-06
 Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
 Frame = +2

Query: 2   VSLFKDLDVNFG----ILYTFAV--HNCPRHHLFGSPQLVIIAGSI*CFLGFFLTWLTVT 163
           VS+FKD+  N G    ILYTFAV  +   R   FG P LV +AG+I  F G+FL W  V 
Sbjct: 56  VSVFKDIGANCGVLSGILYTFAVPYNRHSRLASFGGPWLVHVAGAIQSFTGYFLIWAAVI 115

Query: 164 STIRQPPFV 190
             I +PP V
Sbjct: 116 GLIPRPPVV 124



 Score = 22.3 bits (46), Expect(2) = 4e-06
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 199 TFFNIADVVTVVTNLKGF 252
           +FFN A+VVT V N   +
Sbjct: 138 SFFNTANVVTAVRNFPDY 155


>emb|CBI15294.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score = 51.2 bits (121), Expect(2) = 8e-06
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
 Frame = +2

Query: 2   VSLFKDLDVNFGIL--YTFAVHNCPRHHL-FGSPQLVIIAGSI*CFLGFFLTWLTVTSTI 172
           VS+FKD+  N G+L    ++  +   + L FG P +V +AG+I CF G+FL WL+VT  I
Sbjct: 46  VSVFKDIGANAGVLSGLLYSAASSVSYLLSFGGPWVVHVAGAIQCFAGYFLIWLSVTGVI 105

Query: 173 RQP 181
            +P
Sbjct: 106 HRP 108



 Score = 23.9 bits (50), Expect(2) = 8e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 199 TFFNIADVVTVVTNLKGF 252
           TFFN A+VVT V N   +
Sbjct: 125 TFFNTANVVTAVQNFPDY 142


Top