BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035540
         (311 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519596.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
gb|EEC69228.1| hypothetical protein OsI_38235 [Oryza sativa Indi...    57   3e-06
gb|AAX95501.1| Retrotransposon gag protein, putative [Oryza sati...    56   4e-06
gb|AAC28236.1| T27D20.19 gene product [Arabidopsis thaliana] gi|...    56   4e-06
gb|EEE53167.1| hypothetical protein OsJ_36007 [Oryza sativa Japo...    56   4e-06
gb|EAZ39506.1| hypothetical protein OsJ_23942 [Oryza sativa Japo...    56   4e-06
gb|EEE53168.1| hypothetical protein OsJ_36008 [Oryza sativa Japo...    55   7e-06
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]      55   7e-06
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...    55   7e-06

>ref|XP_002519596.1| conserved hypothetical protein [Ricinus communis]
           gi|223541228|gb|EEF42782.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = -3

Query: 183 MSRAPQAKGTQSNQQRASDMECYKCGGRGHMMRNCPNNKKVLYSATSNGYESYDDEETNE 4
           M+ AP      + Q + SD  CYKCGGRGH++R+CPN KKVL+S  + GYES++DEE N+
Sbjct: 15  MAAAPSQPPYGTRQDKTSDKVCYKCGGRGHIVRDCPNPKKVLFS-QAMGYESFEDEEDND 73


>gb|EEC69228.1| hypothetical protein OsI_38235 [Oryza sativa Indica Group]
          Length = 966

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/81 (35%), Positives = 39/81 (48%)
 Frame = -3

Query: 246  STGHNAGSDSRTAKNATNSGTMSRAPQAKGTQSNQQRASDMECYKCGGRGHMMRNCPNNK 67
            S      + SR       S       + + T ++  ++  +ECY CGGRGH MR+CPN K
Sbjct: 792  SVSFKLATPSRDGSKPAASSVSKSKSKVESTAASGSKSRSVECYTCGGRGHYMRDCPNQK 851

Query: 66   KVLYSATSNGYESYDDEETNE 4
            KVL   T  GY S    E +E
Sbjct: 852  KVL--MTKEGYVSESILENSE 870


>gb|AAX95501.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
           gi|62734602|gb|AAX96711.1| retrotransposon protein,
           putative, Ty3-gypsy sub-class [Oryza sativa Japonica
           Group] gi|77550237|gb|ABA93034.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 456

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
 Frame = -3

Query: 234 NAGSDSRTAKNAT-NSGTMSRAPQAKGTQSNQQ-------RASDMECYKCGGRGHMMRNC 79
           +A S S + K AT   GT   A     +QS  +       ++  +ECY CGGRGH MR+C
Sbjct: 314 SAASKSVSFKPATPRDGTKPAASSMSKSQSKDESTAASGSKSRSVECYTCGGRGHYMRDC 373

Query: 78  PNNKKVLYSATSNGYESYDDEETNE 4
           PN KKVL   T  GY S    E +E
Sbjct: 374 PNQKKVL--MTKEGYVSESLSENSE 396


>gb|AAC28236.1| T27D20.19 gene product [Arabidopsis thaliana]
           gi|7267180|emb|CAB77892.1| putative protein [Arabidopsis
           thaliana]
          Length = 334

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/94 (32%), Positives = 47/94 (50%)
 Frame = -3

Query: 285 NSSQLPSSNVRVPSTGHNAGSDSRTAKNATNSGTMSRAPQAKGTQSNQQRASDMECYKCG 106
           N++   +SN R         SD R    +  +   SR    K   +NQ R+  + C+KC 
Sbjct: 215 NNTPWNASNNRAMDKSKVVESDHRFKNKSNEAPKTSRPKLGKFPSTNQSRSRYITCFKCQ 274

Query: 105 GRGHMMRNCPNNKKVLYSATSNGYESYDDEETNE 4
           GRGHM R C  N++V+    S  YES D++E ++
Sbjct: 275 GRGHMAREC-LNQRVMILTPSGDYESQDEQEDSD 307


>gb|EEE53167.1| hypothetical protein OsJ_36007 [Oryza sativa Japonica Group]
          Length = 330

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
 Frame = -3

Query: 234 NAGSDSRTAKNAT-NSGTMSRAPQAKGTQSNQQ-------RASDMECYKCGGRGHMMRNC 79
           +A S S + K AT   GT   A     +QS  +       ++  +ECY CGGRGH MR+C
Sbjct: 188 SAASKSVSFKPATPRDGTKPAASSMSKSQSKDESTAASGSKSRSVECYTCGGRGHYMRDC 247

Query: 78  PNNKKVLYSATSNGYESYDDEETNE 4
           PN KKVL   T  GY S    E +E
Sbjct: 248 PNQKKVL--MTKEGYVSESLSENSE 270


>gb|EAZ39506.1| hypothetical protein OsJ_23942 [Oryza sativa Japonica Group]
          Length = 486

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = -3

Query: 297 RYESNSSQLPSSNVRVPSTGHNAGSDSRTAKNATNSGTMSRAP-QAKGTQSNQQRASDME 121
           R+ S S       + VP       S     ++   + ++S++  + + T ++  ++  +E
Sbjct: 253 RHTSRSRSFSEMVMEVPLVNRCLSSRLLLLESKPAASSVSKSQSKVESTPASGYKSRSVE 312

Query: 120 CYKCGGRGHMMRNCPNNKKVLYSATSNGYESYDDEETNE 4
           CY CGGRGH MR+CPN KKVL   T  GY S    E +E
Sbjct: 313 CYTCGGRGHYMRDCPNQKKVL--MTKEGYVSESLSENSE 349


>gb|EEE53168.1| hypothetical protein OsJ_36008 [Oryza sativa Japonica Group]
          Length = 1336

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = -3

Query: 210  AKNATNSGTMSRAPQAKGTQSNQQRASDMECYKCGGRGHMMRNCPNNKKVLYSATSNGYE 31
            +K A +S + S++ + + T ++  ++  ++CY CGGRGH MR+CPN KKVL   T  GY 
Sbjct: 1144 SKPAASSVSKSKS-KVESTATSSSKSRSVQCYTCGGRGHYMRDCPNQKKVL--MTKEGYV 1200

Query: 30   SYDDEETNE 4
            S    E +E
Sbjct: 1201 SESILENSE 1209


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
 Frame = -3

Query: 294 YESNSSQLPSSNVRVPSTGHNAGSDSRTAKNATNSGTMSRAPQAKGTQSNQQRASDMECY 115
           + S+S    SSN    S    A  + R  KNA N+ + S     K        +S ++C+
Sbjct: 340 FSSSSGGARSSNYGTSSGKDLAAPNER--KNAANTSSTSVGSSTK--------SSGIQCF 389

Query: 114 KCGGRGHMMRNCPNNKKVL------YSATSNGYESYDDEETN 7
           KCGGRGH+ R CPNN+ ++      Y +TS   +   +EE N
Sbjct: 390 KCGGRGHVARECPNNRTIVVNDQGEYESTSEEEQEDSEEENN 431


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1745

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = -3

Query: 210 AKNATNSGTMSRAPQAKGTQSNQQRASDMECYKCGGRGHMMRNCPNNKKVLYSATSNGYE 31
           +K A +S + S++ + + T ++  ++  ++CY CGGRGH MR+CPN KKVL   T  GY 
Sbjct: 349 SKPAASSVSKSKS-KVESTATSSSKSRSVQCYTCGGRGHYMRDCPNQKKVL--MTKEGYV 405

Query: 30  SYDDEETNE 4
           S    E +E
Sbjct: 406 SESILENSE 414