BLASTX nr result
ID: Rheum21_contig00035515
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035515
(574 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containi... 264 1e-68
ref|XP_004305697.1| PREDICTED: pentatricopeptide repeat-containi... 254 8e-66
gb|EMJ05424.1| hypothetical protein PRUPE_ppa002924mg [Prunus pe... 249 5e-64
gb|EOY14251.1| Pentatricopeptide repeat-containing protein, puta... 238 6e-61
ref|XP_002533676.1| pentatricopeptide repeat-containing protein,... 235 5e-60
ref|XP_004497944.1| PREDICTED: pentatricopeptide repeat-containi... 234 1e-59
ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containi... 228 1e-57
ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containi... 228 1e-57
ref|XP_004137313.1| PREDICTED: pentatricopeptide repeat-containi... 212 5e-53
tpg|DAA38280.1| TPA: hypothetical protein ZEAMMB73_630366 [Zea m... 206 5e-51
gb|EMT03032.1| hypothetical protein F775_06842 [Aegilops tauschii] 201 9e-50
ref|XP_004975215.1| PREDICTED: pentatricopeptide repeat-containi... 197 2e-48
ref|XP_002443455.1| hypothetical protein SORBIDRAFT_08g019750 [S... 189 4e-46
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 185 8e-45
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 182 5e-44
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp... 182 5e-44
ref|XP_006468878.1| PREDICTED: pentatricopeptide repeat-containi... 181 9e-44
gb|EOY08299.1| Pentatricopeptide repeat superfamily protein [The... 181 9e-44
ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containi... 181 9e-44
ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containi... 181 1e-43
>ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 264 bits (674), Expect = 1e-68
Identities = 126/190 (66%), Positives = 151/190 (79%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
DV+ WTSMIEG GT+GL EAL+ F ML V PNSVTFLSLLSAC+HSGL +GC++F
Sbjct: 520 DVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVF 579
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
+ MKW FRIEP+L HYTCMVDLLGRSGKL+EAL +I+K+ C DSRIWGALLAASR + D
Sbjct: 580 HSMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHED 639
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
K+G YAA++LLELEP+NVGY + SN++AS+E W EVE R + E +LKK PGWSCIE
Sbjct: 640 KKLGEYAAEKLLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIE 699
Query: 33 TKGRIVGFVA 4
KG I GFV+
Sbjct: 700 VKGMIHGFVS 709
>ref|XP_004305697.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 616
Score = 254 bits (650), Expect = 8e-66
Identities = 122/190 (64%), Positives = 151/190 (79%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
DV+AWTSMIEG G++GLG EAL+LFD M +G+ PNSVTFLSLLSAC+HSGL T+GC F
Sbjct: 405 DVVAWTSMIEGYGSHGLGFEALKLFDLMTRQGIKPNSVTFLSLLSACSHSGLVTEGCSAF 464
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
MKW + IEP+L HYTC+VDLL R GKL+EAL +I+KM DSRI+GALL+ SR Y +
Sbjct: 465 YSMKWRYGIEPDLDHYTCLVDLLARCGKLKEALAVILKMLAFPDSRIFGALLSGSRIYGN 524
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
+++G YAA+RLLELEP+NVGY +LSN +ASV W EVE R +++E +LKK PGWSCIE
Sbjct: 525 IELGQYAAQRLLELEPDNVGYFTLLSNTQASVRQWDEVEEIRRTMKENDLKKKPGWSCIE 584
Query: 33 TKGRIVGFVA 4
KG I GFV+
Sbjct: 585 AKGLIHGFVS 594
>gb|EMJ05424.1| hypothetical protein PRUPE_ppa002924mg [Prunus persica]
Length = 621
Score = 249 bits (635), Expect = 5e-64
Identities = 124/191 (64%), Positives = 150/191 (78%), Gaps = 1/191 (0%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D++AWTSMIEG G++GLGLEAL+LFD M+ EG PNSVT LSLLSAC+HSGL T+GC+ F
Sbjct: 405 DIVAWTSMIEGYGSHGLGLEALKLFDLMIREGTKPNSVTLLSLLSACSHSGLVTEGCEAF 464
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
MKW F IEP+L HYT +VDLLGRSGKL+EAL +I+KM DSRIWGALL+ SR Y
Sbjct: 465 CSMKWKFGIEPDLDHYTSIVDLLGRSGKLKEALVVIMKMVIFPDSRIWGALLSGSRIYGR 524
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
+G +AA+RLLELEP+NVGY +LSN +ASV W EVE R ++E +LKK PGWSCIE
Sbjct: 525 RDVGEFAAQRLLELEPDNVGYYTLLSNAQASVGEWDEVEEIRRVMKERDLKKKPGWSCIE 584
Query: 33 T-KGRIVGFVA 4
+GRI GFV+
Sbjct: 585 AEEGRIYGFVS 595
>gb|EOY14251.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 682
Score = 238 bits (608), Expect = 6e-61
Identities = 117/189 (61%), Positives = 143/189 (75%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D++AWTSMIEG G +GLG +AL+LFD+M+ EG +PN VTFLSLLSAC+HSGL ++GC +F
Sbjct: 465 DIVAWTSMIEGYGIHGLGSDALKLFDQMVEEGATPNCVTFLSLLSACSHSGLVSEGCYVF 524
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
MKW F IEP+L HYTCMVDLLGR+GKL+EAL I+KM DSRIWGALLA SR +
Sbjct: 525 YSMKWRFSIEPDLDHYTCMVDLLGRAGKLKEALATIMKMLAFPDSRIWGALLAGSRVHGH 584
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
K+G YAA+RLLELE +NVGY +LSN++AS W+EVE R ++ E LKK PGWS I
Sbjct: 585 KKVGEYAAQRLLELESDNVGYHTLLSNVQASTGQWAEVEEVRRAMFEKNLKKQPGWSYIA 644
Query: 33 TKGRIVGFV 7
I FV
Sbjct: 645 ENKHIHCFV 653
>ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526427|gb|EEF28706.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 726
Score = 235 bits (600), Expect = 5e-60
Identities = 114/190 (60%), Positives = 144/190 (75%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D I WTSMIEG G +G+ +EAL+LF++ML E V PN VTFLSLLSAC+HSGL QGC+LF
Sbjct: 498 DNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELF 557
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
MKW F +EP+L HYTCMVDLLGR GK++EAL MI++M DSRIWGAL+A+ R + D
Sbjct: 558 LSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGD 617
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
K+G +AA+RLLE+E +NVGY +LSN++A V W EVE R + E +L+K PGWSCI
Sbjct: 618 KKVGEFAAQRLLEMESDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCIV 677
Query: 33 TKGRIVGFVA 4
KGR F++
Sbjct: 678 GKGRNYCFIS 687
>ref|XP_004497944.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Cicer arietinum]
Length = 620
Score = 234 bits (597), Expect = 1e-59
Identities = 114/190 (60%), Positives = 143/190 (75%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
DV+ WT+MIEGLG++G G EA+ F+ M+ + V PN +TFLSLLSAC+HSGL ++GCK++
Sbjct: 409 DVVIWTTMIEGLGSHGFGFEAVNYFNLMIEQRVWPNHITFLSLLSACSHSGLVSEGCKIY 468
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
MK + IEP L H+TC+VDL GR G L+EAL +I KM+ DSRIWGALLAASR Y +
Sbjct: 469 YSMKSSYGIEPGLDHHTCIVDLFGRCGMLKEALVIIFKMRVVPDSRIWGALLAASRVYGN 528
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
K G YAA+RLLE+EP+NVGY +LSN+KAS W+EVE R + E LKK PGWSCIE
Sbjct: 529 RKFGEYAAQRLLEIEPDNVGYYTLLSNVKASEGRWNEVEELRRVMSEKNLKKKPGWSCIE 588
Query: 33 TKGRIVGFVA 4
KG I GFV+
Sbjct: 589 VKGAIQGFVS 598
>ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 402
Score = 228 bits (580), Expect = 1e-57
Identities = 112/190 (58%), Positives = 140/190 (73%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
DV+AWTSMIEG G +GLG++AL LF +M +E V+PN+VTFLSLLSAC+HSGL ++GC++F
Sbjct: 191 DVVAWTSMIEGYGAHGLGVDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCEIF 250
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
M+ F I+P+L HYTC VDLL RS ++REA +I++M D RIWGAL+ A R Y D
Sbjct: 251 YSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTSLCDGRIWGALMGACRVYGD 310
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
KI YAA RLLELEP+NVGY +LSN +ASV W E E R+ V E +L K PGWS IE
Sbjct: 311 NKIANYAAHRLLELEPDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKDLVKKPGWSFIE 370
Query: 33 TKGRIVGFVA 4
G I GFV+
Sbjct: 371 LNGTIHGFVS 380
>ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Cucumis sativus]
Length = 591
Score = 228 bits (580), Expect = 1e-57
Identities = 112/190 (58%), Positives = 140/190 (73%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
DV+AWTSMIEG G +GLG++AL LF +M +E V+PN+VTFLSLLSAC+HSGL ++GC++F
Sbjct: 380 DVVAWTSMIEGYGAHGLGVDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCEIF 439
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
M+ F I+P+L HYTC VDLL RS ++REA +I++M D RIWGAL+ A R Y D
Sbjct: 440 YSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTSLCDGRIWGALMGACRVYGD 499
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
KI YAA RLLELEP+NVGY +LSN +ASV W E E R+ V E +L K PGWS IE
Sbjct: 500 NKIANYAAHRLLELEPDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKDLVKKPGWSFIE 559
Query: 33 TKGRIVGFVA 4
G I GFV+
Sbjct: 560 LNGTIHGFVS 569
>ref|XP_004137313.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 277
Score = 212 bits (540), Expect = 5e-53
Identities = 105/182 (57%), Positives = 132/182 (72%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
DV+AWTSMIEG G +GLG++AL LF +M +E V+PN+VTFLSLLSAC+HSGL ++GC++F
Sbjct: 22 DVVAWTSMIEGYGAHGLGVDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCEIF 81
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
M+ F I+P+L HYTC VDLL RS ++REA +I++M D RIWGAL+ A R Y D
Sbjct: 82 YSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTSLCDGRIWGALMGACRVYGD 141
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
KI YAA RLLELEP+NVGY +LSN +ASV W E E R+ V E +L K PG
Sbjct: 142 NKIANYAAHRLLELEPDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKDLVKKPGDGATA 201
Query: 33 TK 28
TK
Sbjct: 202 TK 203
>tpg|DAA38280.1| TPA: hypothetical protein ZEAMMB73_630366 [Zea mays]
Length = 563
Score = 206 bits (523), Expect = 5e-51
Identities = 100/183 (54%), Positives = 133/183 (72%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D+++W+SMIE +G G +AL LF++ML EGV PN VTFLSLLSAC+HSGL ++ +LF
Sbjct: 379 DIVSWSSMIEAFTIHGHGKQALTLFNQMLKEGVKPNEVTFLSLLSACSHSGLVSEARELF 438
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
+ M FR PEL HYTCMVD+LGRSG L EAL +I M+ D RIWGALL + R + +
Sbjct: 439 DCMTKKFRFAPELGHYTCMVDVLGRSGNLEEALQVISNMKVKADGRIWGALLGSCRIHSN 498
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
K+ +AA++L+ELEP NVGY V+LSN++A + W+EVE R+S+E M ++K P WSCI
Sbjct: 499 SKLAYFAAQKLVELEPSNVGYHVLLSNIQAGGDRWAEVEDIRSSMEVMNMEKSPAWSCIS 558
Query: 33 TKG 25
G
Sbjct: 559 DIG 561
>gb|EMT03032.1| hypothetical protein F775_06842 [Aegilops tauschii]
Length = 411
Score = 201 bits (512), Expect = 9e-50
Identities = 103/184 (55%), Positives = 132/184 (71%), Gaps = 1/184 (0%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D++AW+SMIE +G G EAL LFD+ML EGV PN VTFLSLLSAC++SGL ++ LF
Sbjct: 226 DIVAWSSMIEAYAIHGNGREALALFDQMLAEGVMPNGVTFLSLLSACSYSGLVSEARALF 285
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
+ M F I PEL HYTCMVD+LGRSG L EA+ +I M D RIWGALLA+ RT+ +
Sbjct: 286 DCMVRKFGITPELSHYTCMVDILGRSGDLDEAVQVISGMNVKPDGRIWGALLASCRTHSN 345
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKA-SVELWSEVEAARTSVEEMELKKVPGWSCI 37
V++ AA++L+ELEP+NVGY VV SN++A S + W EVE R S+ M+ +KVP WSC+
Sbjct: 346 VELASLAAQKLMELEPDNVGYHVVYSNVQAGSGDRWREVEHIRRSMAVMDAQKVPAWSCV 405
Query: 36 ETKG 25
G
Sbjct: 406 ADTG 409
>ref|XP_004975215.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Setaria italica]
Length = 495
Score = 197 bits (501), Expect = 2e-48
Identities = 97/183 (53%), Positives = 131/183 (71%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D+++W+SMIE +G EAL +F+RML EG+ PN VTFLSLLSAC+HSGL T+ +LF
Sbjct: 311 DLVSWSSMIEAFTIHGHSKEALTMFNRMLEEGIKPNGVTFLSLLSACSHSGLVTEARELF 370
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
+ M FR+ P+L HYT MVD+LGRSG L EAL +I M+ D RIWGALLA+ R + +
Sbjct: 371 DCMTKTFRLAPDLGHYTSMVDVLGRSGNLEEALQVISDMKVNPDGRIWGALLASCRMHSN 430
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
K+ +AA++L+ELEP+NVGY VV SN+ A W+EVE R+S+ M ++K P WSC+
Sbjct: 431 SKLACFAAQKLVELEPDNVGYHVVFSNVHAGGGRWAEVEDIRSSMIGMNMEKSPAWSCLS 490
Query: 33 TKG 25
+ G
Sbjct: 491 SIG 493
>ref|XP_002443455.1| hypothetical protein SORBIDRAFT_08g019750 [Sorghum bicolor]
gi|241944148|gb|EES17293.1| hypothetical protein
SORBIDRAFT_08g019750 [Sorghum bicolor]
Length = 565
Score = 189 bits (480), Expect = 4e-46
Identities = 96/185 (51%), Positives = 126/185 (68%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D I+W+SMIE +G G +AL LF +ML EG PN VTFLSLLSAC HSGL ++ +LF
Sbjct: 381 DSISWSSMIETYTIHGDGRKALALFRQMLEEGARPNGVTFLSLLSACGHSGLVSEARELF 440
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
+ M F I PEL HYTCMVD+LGRSG L EA+ +I M D RIWGALLA+ +T+ +
Sbjct: 441 DCMTRKFGIAPELGHYTCMVDVLGRSGNLEEAVQLINGMTVKPDGRIWGALLASCKTHSN 500
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
K+ AA++L+ELEP NVGY VV SN++A W EVE R+S+ + +++K P WS +
Sbjct: 501 SKLANLAARKLMELEPNNVGYHVVFSNVQAGGSRWGEVEDIRSSMVDKDMQKSPAWSRVS 560
Query: 33 TKGRI 19
G +
Sbjct: 561 DIGGV 565
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 185 bits (469), Expect = 8e-45
Identities = 93/190 (48%), Positives = 124/190 (65%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D+++WT MI G G +G G EA+ F++M G+ P+ V+F+S+L AC+HSGL +G K+F
Sbjct: 619 DLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIF 678
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
N+MK +IEP L HY CMVDLL R+G L +A I M D+ IWGALL R + D
Sbjct: 679 NIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHD 738
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
VK+ A+R+ ELEPEN GY V+L+N+ A E W EV+ R + + LKK PG S IE
Sbjct: 739 VKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIE 798
Query: 33 TKGRIVGFVA 4
KG+I FVA
Sbjct: 799 IKGKINIFVA 808
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 182 bits (462), Expect = 5e-44
Identities = 94/190 (49%), Positives = 121/190 (63%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D+I+WT MI G G +G G EA+ FD M + G+ P+ V+F+S+L AC+HSGL +G F
Sbjct: 571 DLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIEPDEVSFISILYACSHSGL-DEGWSFF 629
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
NVM+ + IEP L HY CMVDLL R+G L +A I KM D+ IWGALL RTY D
Sbjct: 630 NVMRNEYSIEPMLEHYACMVDLLSRTGNLSKAYRFIRKMPIEPDATIWGALLCGCRTYHD 689
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
VK+ A+ + ELEP+N GY V+L+N+ A E W EV R + LKK PG S IE
Sbjct: 690 VKLAERVAEHVFELEPDNTGYYVLLANIYAEAEKWEEVRKLREKIGRRGLKKNPGCSWIE 749
Query: 33 TKGRIVGFVA 4
KG++ FVA
Sbjct: 750 IKGKVNIFVA 759
Score = 58.9 bits (141), Expect = 9e-07
Identities = 41/130 (31%), Positives = 61/130 (46%)
Frame = -2
Query: 570 VIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLFN 391
V++WTSMI G G EA+ LF M GVSP+ T S+L ACA SG G + N
Sbjct: 371 VVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTITSILHACACSGSLEDGKDVHN 430
Query: 390 VMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMDV 211
++ +E L ++D+ + G + +A + +M +D W +
Sbjct: 431 YIR-ESGMESNLFVCNALMDMYSKCGSMDDANLVFSRMP-AKDIISWNTM---------- 478
Query: 210 KIGGYAAKRL 181
IGGY+ RL
Sbjct: 479 -IGGYSKNRL 487
>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 182 bits (462), Expect = 5e-44
Identities = 89/190 (46%), Positives = 123/190 (64%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
D+++WT MI G G +G G EA+ F+ M + G+ P+ V+F+S+L AC+HSGL QG + F
Sbjct: 359 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF 418
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
+MK F IEP+L HY CMVDLL R+G L +A I + D+ IWGALL R Y D
Sbjct: 419 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHD 478
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
+++ A+R+ ELEPEN GY V+L+N+ A E W EV+ R + + L+K PG S IE
Sbjct: 479 IELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIE 538
Query: 33 TKGRIVGFVA 4
KGR+ FV+
Sbjct: 539 IKGRVNLFVS 548
>ref|XP_006468878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Citrus sinensis]
Length = 662
Score = 181 bits (460), Expect = 9e-44
Identities = 88/189 (46%), Positives = 126/189 (66%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
+V +WT+MI G G + EAL+LF +M+ GV PN +TF+S+LSAC+H+GL +G F
Sbjct: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWF 414
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
N M F IEP + HY CMVDLLGR+GKL+EA +I M+ D +WG+LL A R + +
Sbjct: 415 NTMSHEFNIEPGVEHYGCMVDLLGRAGKLKEAYNLIEGMKVKPDFVVWGSLLGACRIHKN 474
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
+ +G AAK+L ELEP N GY V+LSN+ A+ W +VE R+ ++ L K PG+S +E
Sbjct: 475 LDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
Query: 33 TKGRIVGFV 7
+G++ F+
Sbjct: 535 LRGKVHAFL 543
>gb|EOY08299.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 809
Score = 181 bits (460), Expect = 9e-44
Identities = 85/188 (45%), Positives = 129/188 (68%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
+VI+W++MI G +G G +AL+LF ML+ G+ PN +TF+SL AC+H+GL +G +LF
Sbjct: 321 NVISWSAMIAAYGYHGQGRKALDLFPMMLSSGIMPNRITFVSLFYACSHAGLVDEGLQLF 380
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMD 214
N+M + + P+++HYTCM+DLLGR+G+L EAL +I M +D +WGA+LAA R +
Sbjct: 381 NMMWDEYAVRPDVKHYTCMIDLLGRAGRLDEALNLIENMTIEKDEGLWGAMLAACRIHKH 440
Query: 213 VKIGGYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIE 34
V++ AAK LLEL+P+N G+ V+LSN+ A+ W ++ R + + LKK+PGW+ IE
Sbjct: 441 VELAERAAKSLLELQPQNPGHYVLLSNIYANAGRWEDMAKIRNLMTKRSLKKIPGWTWIE 500
Query: 33 TKGRIVGF 10
+I F
Sbjct: 501 VDNKIYQF 508
>ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 181 bits (460), Expect = 9e-44
Identities = 89/178 (50%), Positives = 118/178 (66%)
Frame = -2
Query: 561 WTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLFNVMK 382
W ++I GLG +G G EAL LF RM EG+ P+ VTF+SLL+AC+H+GL QG F+VM+
Sbjct: 442 WNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQ 501
Query: 381 WHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMDVKIG 202
+ I P +HY CM D+LGR+G+L EA I M DS +WGALL A R + +V++G
Sbjct: 502 VTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMG 561
Query: 201 GYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIETK 28
A++ L EL+PENVGY V++SNM A V W V+ R+ V L+K PGWS IE K
Sbjct: 562 KVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVK 619
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/113 (31%), Positives = 59/113 (52%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLF 394
DV AW +M+ GL EA+ LF RM+ EGV+ ++VT S+L C G +
Sbjct: 133 DVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLAL-VM 191
Query: 393 NVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLA 235
+V ++ EL ++D+ G+ G L EA C+ M+ C+D W ++++
Sbjct: 192 HVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGME-CRDLVTWNSIIS 243
Score = 55.8 bits (133), Expect = 8e-06
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRML-NEGVSPNSVTFLSLLSACAHSGLATQGCKL 397
D ++W ++I G GL EA+E + M +EG+ TF+S+L A +H G QG ++
Sbjct: 336 DSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRM 395
Query: 396 FNVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLA 235
+ + + ++ TC++DL + GKL EA+ + KM + + W A+++
Sbjct: 396 -HALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP-RRSTGPWNAIIS 447
>ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Oryza brachyantha]
Length = 749
Score = 181 bits (459), Expect = 1e-43
Identities = 89/178 (50%), Positives = 119/178 (66%)
Frame = -2
Query: 561 WTSMIEGLGTYGLGLEALELFDRMLNEGVSPNSVTFLSLLSACAHSGLATQGCKLFNVMK 382
W ++I GLG +G G +AL LF +M EG+SP+ VTF+SLL+AC+H+GL QG FN+M+
Sbjct: 444 WNAVIAGLGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRDFFNMMQ 503
Query: 381 WHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYMDVKIG 202
+ I P +HY CMVD+LGRSG+L +A I M DS IWGALL A R + +V++G
Sbjct: 504 TSYGIMPVAKHYACMVDMLGRSGQLDDAFEFIQNMPIKPDSAIWGALLGACRIHGNVEMG 563
Query: 201 GYAAKRLLELEPENVGYRVVLSNMKASVELWSEVEAARTSVEEMELKKVPGWSCIETK 28
A++ L EL+PENVGY V++SNM A W V+ R+ V L+K PGWS IE K
Sbjct: 564 KVASQNLTELDPENVGYYVLMSNMYAKAGKWDGVDEVRSLVRRQNLQKTPGWSSIEVK 621
Score = 58.9 bits (141), Expect = 9e-07
Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Frame = -2
Query: 573 DVIAWTSMIEGLGTYGLGLEALELFDRML-NEGVSPNSVTFLSLLSACAHSGLATQGCKL 397
D ++W ++I G GL +A+ ++ M +EG+ P TF+S+L A +H G QG ++
Sbjct: 338 DAVSWNTLITGYMQNGLSSDAIHAYNHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRM 397
Query: 396 FNVMKWHFRIEPELRHYTCMVDLLGRSGKLREALCMIVKMQCCQDSRIWGALLAASRTYM 217
+ + + +L TC++DL + GKL EA+ + +M + + W A++A
Sbjct: 398 -HALSVKTGLNLDLYVGTCLIDLYAKCGKLDEAMLLFEQM-ARRSTGPWNAVIAG----- 450
Query: 216 DVKIGGYAAKRL 181
+ + G+ AK L
Sbjct: 451 -LGVHGHGAKAL 461