BLASTX nr result
ID: Rheum21_contig00035507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035507
(323 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ20530.1| hypothetical protein PRUPE_ppa019289mg, partial [... 175 7e-42
ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com... 174 8e-42
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 174 1e-41
emb|CBI24843.3| unnamed protein product [Vitis vinifera] 174 1e-41
ref|XP_002299652.1| Sister chromatid cohesion 1 protein 3 [Popul... 173 2e-41
gb|EOX96749.1| Cohesin subunit rad21, putative isoform 2 [Theobr... 171 1e-40
gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobr... 171 1e-40
ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 prote... 167 1e-39
ref|XP_006439064.1| hypothetical protein CICLE_v100309241mg, par... 167 1e-39
gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus nota... 166 2e-39
ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 prote... 166 3e-39
ref|XP_006402677.1| hypothetical protein EUTSA_v10005819mg [Eutr... 156 3e-36
ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 prote... 150 1e-34
ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Caps... 150 1e-34
ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 prote... 150 1e-34
ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arab... 147 1e-33
ref|XP_004515558.1| PREDICTED: sister chromatid cohesion 1 prote... 145 7e-33
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops... 145 7e-33
ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidop... 145 7e-33
ref|XP_006585340.1| PREDICTED: sister chromatid cohesion 1 prote... 143 2e-32
>gb|EMJ20530.1| hypothetical protein PRUPE_ppa019289mg, partial [Prunus persica]
Length = 690
Score = 175 bits (443), Expect = 7e-42
Identities = 82/99 (82%), Positives = 92/99 (92%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAHLQ +L+KSHYTSTDIPSTVDRIMFP+VPIALRMS HLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHLQSRLKKSHYTSTDIPSTVDRIMFPDVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLPPN 5
+GVVRIYSKKVDYLY+DCN+VL +L+KAF D++LP N
Sbjct: 61 VGVVRIYSKKVDYLYQDCNVVLTSLRKAFASIDLNLPEN 99
>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
putative [Ricinus communis]
Length = 774
Score = 174 bits (442), Expect = 8e-42
Identities = 83/99 (83%), Positives = 91/99 (91%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAHLQH+L+KSHYTSTDI STVDRIMFPEVPIALRMS HLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDISSTVDRIMFPEVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLPPN 5
LGVVRIYSKKVD+LY DCN+VL+ L+KAF +V+LP N
Sbjct: 61 LGVVRIYSKKVDFLYHDCNVVLVGLRKAFTSIEVNLPEN 99
>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
vinifera]
Length = 761
Score = 174 bits (440), Expect = 1e-41
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS TFLARKGPLGTVWCAAHLQHKL+KSHYT+TDIPSTV+RIMFPEVPIALRMS HLL
Sbjct: 1 MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSKKVDYLY+DCN+VL+ ++KAF +V+LP
Sbjct: 61 LGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSIEVNLP 97
>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 174 bits (440), Expect = 1e-41
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS TFLARKGPLGTVWCAAHLQHKL+KSHYT+TDIPSTV+RIMFPEVPIALRMS HLL
Sbjct: 1 MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSKKVDYLY+DCN+VL+ ++KAF +V+LP
Sbjct: 61 LGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSIEVNLP 97
>ref|XP_002299652.1| Sister chromatid cohesion 1 protein 3 [Populus trichocarpa]
gi|222846910|gb|EEE84457.1| Sister chromatid cohesion 1
protein 3 [Populus trichocarpa]
Length = 818
Score = 173 bits (438), Expect = 2e-41
Identities = 82/99 (82%), Positives = 89/99 (89%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAHLQH+L+KSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLPPN 5
LGVVRIY KKVDYL++DC + L L KAF +V+LP N
Sbjct: 61 LGVVRIYKKKVDYLFQDCTVALAGLNKAFTTTEVNLPEN 99
>gb|EOX96749.1| Cohesin subunit rad21, putative isoform 2 [Theobroma cacao]
Length = 652
Score = 171 bits (432), Expect = 1e-40
Identities = 80/97 (82%), Positives = 87/97 (89%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAHLQH+L+KSHYT+ DIPSTVD IMFPEVPIALRMS HLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTAADIPSTVDLIMFPEVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSKKVDYL+ DCN+VL+ L+K F VDLP
Sbjct: 61 LGVVRIYSKKVDYLFHDCNIVLIGLRKVFASVQVDLP 97
>gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
Length = 677
Score = 171 bits (432), Expect = 1e-40
Identities = 80/97 (82%), Positives = 87/97 (89%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAHLQH+L+KSHYT+ DIPSTVD IMFPEVPIALRMS HLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTAADIPSTVDLIMFPEVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSKKVDYL+ DCN+VL+ L+K F VDLP
Sbjct: 61 LGVVRIYSKKVDYLFHDCNIVLIGLRKVFASVQVDLP 97
>ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Citrus
sinensis]
Length = 735
Score = 167 bits (424), Expect = 1e-39
Identities = 79/97 (81%), Positives = 88/97 (90%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAHLQH+L+KSHYTST+IPSTVDRIM P+VPIALRMS HLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTNIPSTVDRIMCPDVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSKKVDYLY DCN+ L++L+K F V+LP
Sbjct: 61 LGVVRIYSKKVDYLYHDCNVFLISLRKTFSTVSVNLP 97
>ref|XP_006439064.1| hypothetical protein CICLE_v100309241mg, partial [Citrus
clementina] gi|557541260|gb|ESR52304.1| hypothetical
protein CICLE_v100309241mg, partial [Citrus clementina]
Length = 527
Score = 167 bits (424), Expect = 1e-39
Identities = 79/97 (81%), Positives = 88/97 (90%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAHLQH+L+KSHYTST+IPSTVDRIM P+VPIALRMS HLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTNIPSTVDRIMCPDVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSKKVDYLY DCN+ L++L+K F V+LP
Sbjct: 61 LGVVRIYSKKVDYLYHDCNVFLISLRKTFSTVSVNLP 97
>gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus notabilis]
Length = 712
Score = 166 bits (421), Expect = 2e-39
Identities = 78/97 (80%), Positives = 88/97 (90%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPLGTVWCAAH+Q +L+KSHYTSTDIP+TV+RIMFPEVP+ALRM+SHLL
Sbjct: 1 MFYSQTFLARKGPLGTVWCAAHMQSRLKKSHYTSTDIPATVERIMFPEVPLALRMTSHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSKKVD LY DCN VL L+KAF D++LP
Sbjct: 61 LGVVRIYSKKVDILYDDCNAVLTRLRKAFASVDLNLP 97
>ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Fragaria
vesca subsp. vesca]
Length = 736
Score = 166 bits (420), Expect = 3e-39
Identities = 80/99 (80%), Positives = 87/99 (87%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS T LARKGPLGTVWCAAHLQH+L+KSHY +TDIPSTVDRIMFPEVPIALRMS HLL
Sbjct: 1 MFYSHTILARKGPLGTVWCAAHLQHRLKKSHYAATDIPSTVDRIMFPEVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLPPN 5
LGVVRIYSKKV+YL+ DCN+VL LKKAFV D+ L N
Sbjct: 61 LGVVRIYSKKVEYLHHDCNVVLNGLKKAFVSIDLTLSEN 99
>ref|XP_006402677.1| hypothetical protein EUTSA_v10005819mg [Eutrema salsugineum]
gi|557103776|gb|ESQ44130.1| hypothetical protein
EUTSA_v10005819mg [Eutrema salsugineum]
Length = 689
Score = 156 bits (394), Expect = 3e-36
Identities = 74/97 (76%), Positives = 84/97 (86%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQT LARKGPLGTVWCAAHLQH+L+KSHYT+T+IP TVD IMFPEVP+ALR+S LL
Sbjct: 1 MFYSQTHLARKGPLGTVWCAAHLQHRLKKSHYTATNIPKTVDLIMFPEVPLALRLSGVLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSK+VDYL++DCNL L KAF+ VDLP
Sbjct: 61 LGVVRIYSKQVDYLFRDCNLFSTWLAKAFLSTQVDLP 97
>ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
tuberosum]
Length = 675
Score = 150 bits (380), Expect = 1e-34
Identities = 72/97 (74%), Positives = 83/97 (85%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS TFLARKGPLGTVWCAAHLQHKL+K HYTST+IPSTV+RIM PEVPIALR S HLL
Sbjct: 1 MFYSHTFLARKGPLGTVWCAAHLQHKLKKPHYTSTNIPSTVERIMTPEVPIALRTSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSK+V+Y +DC +L+ + KAF +V+LP
Sbjct: 61 LGVVRIYSKQVEYFSEDCKTLLMGVIKAFSSTNVNLP 97
>ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Capsella rubella]
gi|482558971|gb|EOA23162.1| hypothetical protein
CARUB_v10016763mg [Capsella rubella]
Length = 702
Score = 150 bits (380), Expect = 1e-34
Identities = 71/97 (73%), Positives = 83/97 (85%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQT LARKGP+GTVWCAAH+Q++L+KS YT+ DIP TVD IMFPE+P+ALR SSHLL
Sbjct: 1 MFYSQTLLARKGPMGTVWCAAHVQNRLKKSQYTAIDIPKTVDSIMFPEIPLALRTSSHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
+GVVRIYSKKVDYLY D N++ + KAFV A VDLP
Sbjct: 61 IGVVRIYSKKVDYLYHDWNVLNTWVAKAFVSAQVDLP 97
>ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
lycopersicum]
Length = 668
Score = 150 bits (380), Expect = 1e-34
Identities = 72/97 (74%), Positives = 83/97 (85%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS TFLARKGPLGTVWCAAHLQHKL+K HYTST+IPSTV+RIM PEVPIALR S HLL
Sbjct: 1 MFYSHTFLARKGPLGTVWCAAHLQHKLKKPHYTSTNIPSTVERIMTPEVPIALRTSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
LGVVRIYSK+V+Y +DC +L+ + KAF +V+LP
Sbjct: 61 LGVVRIYSKQVEYFSEDCKTLLMGVIKAFSSTNVNLP 97
>ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arabidopsis lyrata subsp.
lyrata] gi|297322348|gb|EFH52769.1| hypothetical protein
ARALYDRAFT_486422 [Arabidopsis lyrata subsp. lyrata]
Length = 696
Score = 147 bits (371), Expect = 1e-33
Identities = 69/97 (71%), Positives = 80/97 (82%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS T LARKGPLGTVWCAAH+QH+L+KS YT+ +IP TVD IMFPE P+ALR+S HLL
Sbjct: 1 MFYSHTLLARKGPLGTVWCAAHVQHRLKKSQYTAVNIPDTVDNIMFPEAPLALRLSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
GVVRIYSKKVDYLY D NL+ + KAFV + V+LP
Sbjct: 61 FGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSSQVNLP 97
>ref|XP_004515558.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cicer
arietinum]
Length = 698
Score = 145 bits (365), Expect = 7e-33
Identities = 73/100 (73%), Positives = 77/100 (77%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPL TVW AAHLQH+L+KS YTSTDIPSTV IM P VPIALRMS+HLL
Sbjct: 1 MFYSQTFLARKGPLSTVWIAAHLQHRLKKSQYTSTDIPSTVQHIMDPGVPIALRMSAHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLPPND 2
LGVVRIYSKKVDYL DCN V L K F + P D
Sbjct: 61 LGVVRIYSKKVDYLLTDCNAVRTVLYKVFASVSNNTLPED 100
>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
Length = 692
Score = 145 bits (365), Expect = 7e-33
Identities = 70/97 (72%), Positives = 79/97 (81%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS T LARKGPLGTVWCAAH+ +L+KS YTS +IP TVD IMFPEVP+ALR SSHLL
Sbjct: 1 MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
+GVVRIYSKKVDYLY D NL+ + KAFV V+LP
Sbjct: 61 VGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLP 97
>ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidopsis thaliana]
gi|30913284|sp|Q9FQ19.2|SCC13_ARATH RecName: Full=Sister
chromatid cohesion 1 protein 3; AltName: Full=SCC1
homolog 3; Short=AtRAD21-2
gi|18157647|gb|AAL62059.1|AF400128_1 RAD21-2
[Arabidopsis thaliana] gi|6996291|emb|CAB75452.1|
putative protein [Arabidopsis thaliana]
gi|332646418|gb|AEE79939.1| sister chromatid cohesion 1
protein 3 [Arabidopsis thaliana]
Length = 693
Score = 145 bits (365), Expect = 7e-33
Identities = 70/97 (72%), Positives = 79/97 (81%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYS T LARKGPLGTVWCAAH+ +L+KS YTS +IP TVD IMFPEVP+ALR SSHLL
Sbjct: 1 MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAFVHADVDLP 11
+GVVRIYSKKVDYLY D NL+ + KAFV V+LP
Sbjct: 61 VGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLP 97
>ref|XP_006585340.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Glycine max]
Length = 705
Score = 143 bits (361), Expect = 2e-32
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = -2
Query: 301 MFYSQTFLARKGPLGTVWCAAHLQHKLRKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 122
MFYSQTFLARKGPL TVW AAHLQH+L+KSHYT+TDIPSTV RIM P VPIALRMS HLL
Sbjct: 1 MFYSQTFLARKGPLSTVWIAAHLQHRLKKSHYTATDIPSTVLRIMDPGVPIALRMSGHLL 60
Query: 121 LGVVRIYSKKVDYLYKDCNLVLLTLKKAF 35
LGVVRIYSKKV+YL++DC L L KAF
Sbjct: 61 LGVVRIYSKKVEYLHQDCKDALTGLHKAF 89