BLASTX nr result
ID: Rheum21_contig00035445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035445
(239 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006306580.1| hypothetical protein CARUB_v10008075mg [Caps... 51 4e-09
ref|XP_006306579.1| hypothetical protein CARUB_v10008075mg [Caps... 51 4e-09
gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana] 49 5e-08
gb|AAF73380.1| MOM [Arabidopsis thaliana] 49 5e-08
ref|NP_563806.1| helicase protein MOM1 [Arabidopsis thaliana] gi... 49 5e-08
ref|XP_002892431.1| hypothetical protein ARALYDRAFT_470861 [Arab... 51 2e-07
ref|XP_002318937.1| MORPHEUS MOLECULE family protein [Populus tr... 52 2e-07
ref|XP_006384923.1| hypothetical protein POPTR_0004s22270g [Popu... 50 2e-07
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu... 48 9e-07
gb|AGM20688.1| MET1-2 [Populus tomentosa] 47 3e-06
ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258... 56 4e-06
emb|CBI16338.3| unnamed protein product [Vitis vinifera] 56 4e-06
>ref|XP_006306580.1| hypothetical protein CARUB_v10008075mg [Capsella rubella]
gi|482575291|gb|EOA39478.1| hypothetical protein
CARUB_v10008075mg [Capsella rubella]
Length = 1877
Score = 51.2 bits (121), Expect(2) = 4e-09
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F TKLL G+ P W+Y S ++QRNRKRVQY+ E S + ++DD N +K+K
Sbjct: 694 FWTKLLSGKNPVWKYPSDTTQRNRKRVQYF-EGSGASPKLDDGGNAKKRK 742
Score = 35.0 bits (79), Expect(2) = 4e-09
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G YS++ SL GE H L DED LF K + GK
Sbjct: 669 GTYSSDTSLFGEKHISLPDEDSPNLFWTKLLSGK 702
>ref|XP_006306579.1| hypothetical protein CARUB_v10008075mg [Capsella rubella]
gi|482575290|gb|EOA39477.1| hypothetical protein
CARUB_v10008075mg [Capsella rubella]
Length = 1874
Score = 51.2 bits (121), Expect(2) = 4e-09
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F TKLL G+ P W+Y S ++QRNRKRVQY+ E S + ++DD N +K+K
Sbjct: 691 FWTKLLSGKNPVWKYPSDTTQRNRKRVQYF-EGSGASPKLDDGGNAKKRK 739
Score = 35.0 bits (79), Expect(2) = 4e-09
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G YS++ SL GE H L DED LF K + GK
Sbjct: 666 GTYSSDTSLFGEKHISLPDEDSPNLFWTKLLSGK 699
>gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana]
Length = 2254
Score = 48.5 bits (114), Expect(2) = 5e-08
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F +KLL G+ P W+Y S + QRNRKRVQY+ E SE + + D N +K+K
Sbjct: 1046 FWSKLLGGKNPMWKYPSDTPQRNRKRVQYF-EGSEASPKTGDGGNAKKRK 1094
Score = 33.9 bits (76), Expect(2) = 5e-08
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G YS++ +L GE H +L DE+ +F K +GGK
Sbjct: 1021 GTYSSDSTLFGEDHIKLSDEESPNIFWSKLLGGK 1054
>gb|AAF73380.1| MOM [Arabidopsis thaliana]
Length = 2001
Score = 48.5 bits (114), Expect(2) = 5e-08
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F +KLL G+ P W+Y S + QRNRKRVQY+ E SE + + D N +K+K
Sbjct: 813 FWSKLLGGKNPMWKYPSDTPQRNRKRVQYF-EGSEASPKTGDGGNAKKRK 861
Score = 33.9 bits (76), Expect(2) = 5e-08
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G YS++ +L GE H +L DE+ +F K +GGK
Sbjct: 788 GTYSSDSTLFGEDHIKLSDEESPNIFWSKLLGGK 821
>ref|NP_563806.1| helicase protein MOM1 [Arabidopsis thaliana]
gi|30680475|ref|NP_849608.1| helicase protein MOM1
[Arabidopsis thaliana]
gi|75185434|sp|Q9M658.1|MOM1_ARATH RecName:
Full=Helicase protein MOM1; AltName: Full=Protein
MAINTENANCE OF METHYLATION; AltName: Full=Protein
MORPHEUS MOLECULE 1 gi|8132770|gb|AAF73381.1| MOM
[Arabidopsis thaliana] gi|332190115|gb|AEE28236.1|
ATP-dependent helicase family protein [Arabidopsis
thaliana] gi|332190116|gb|AEE28237.1| ATP-dependent
helicase family protein [Arabidopsis thaliana]
Length = 2001
Score = 48.5 bits (114), Expect(2) = 5e-08
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F +KLL G+ P W+Y S + QRNRKRVQY+ E SE + + D N +K+K
Sbjct: 813 FWSKLLGGKNPMWKYPSDTPQRNRKRVQYF-EGSEASPKTGDGGNAKKRK 861
Score = 33.9 bits (76), Expect(2) = 5e-08
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G YS++ +L GE H +L DE+ +F K +GGK
Sbjct: 788 GTYSSDSTLFGEDHIKLSDEESPNIFWSKLLGGK 821
>ref|XP_002892431.1| hypothetical protein ARALYDRAFT_470861 [Arabidopsis lyrata subsp.
lyrata] gi|297338273|gb|EFH68690.1| hypothetical protein
ARALYDRAFT_470861 [Arabidopsis lyrata subsp. lyrata]
Length = 2034
Score = 50.8 bits (120), Expect(2) = 2e-07
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F TKLL G+ P W+Y S + QRNRKRVQY+ E SE + ++ D N +K+K
Sbjct: 840 FWTKLLGGKNPMWKYPSDTPQRNRKRVQYF-EGSEESPKIGDGGNAKKRK 888
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRH--RLFQDKTVGGK 134
G YS++ +L GE H +L ED H +F K +GGK
Sbjct: 813 GTYSSDSTLFGEDHIKLLAEDSHSPNIFWTKLLGGK 848
>ref|XP_002318937.1| MORPHEUS MOLECULE family protein [Populus trichocarpa]
gi|222857313|gb|EEE94860.1| MORPHEUS MOLECULE family
protein [Populus trichocarpa]
Length = 2283
Score = 52.0 bits (123), Expect(2) = 2e-07
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSE-TNVQVDDTVNMQKKKGN 4
F KLLEG+QPRW+Y S SQRNRKRVQY + + T V+ D+ V + K N
Sbjct: 1142 FWKKLLEGKQPRWKYSSGLSQRNRKRVQYADDIQKNTVVEGDEVVKKRNKVAN 1194
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G Y+TN L GE QL DE+ +F K + GK
Sbjct: 1117 GIYTTNFPLHGERKIQLLDEELPHIFWKKLLEGK 1150
>ref|XP_006384923.1| hypothetical protein POPTR_0004s22270g [Populus trichocarpa]
gi|550341691|gb|ERP62720.1| hypothetical protein
POPTR_0004s22270g [Populus trichocarpa]
Length = 1907
Score = 50.4 bits (119), Expect(2) = 2e-07
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSET-NVQVDDTVNMQKK 13
F +LL+G+QP+W+Y S QRNRKRVQY+ +T + V+ D+ V +KK
Sbjct: 674 FWERLLKGKQPQWKYSSGLFQRNRKRVQYFDDTQKNPEVEADEVVKKRKK 723
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G Y+TN+ L GE QL DE+ +F ++ + GK
Sbjct: 649 GSYTTNLPLHGEPKIQLLDEELPHVFWERLLKGK 682
>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1996
Score = 48.1 bits (113), Expect(2) = 9e-07
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSET-NVQVDDTVNMQKK 13
F +LL+G+QP+W+Y S QRNRKRVQY+ + + V+ D+ V +KK
Sbjct: 775 FWERLLKGKQPQWKYSSGLFQRNRKRVQYFDDIQKNPEVEADEVVKKRKK 824
Score = 30.0 bits (66), Expect(2) = 9e-07
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G Y+TN+ L GE QL DE+ +F ++ + GK
Sbjct: 750 GSYTTNLPLHGEPKIQLLDEELPHVFWERLLKGK 783
>gb|AGM20688.1| MET1-2 [Populus tomentosa]
Length = 2137
Score = 47.0 bits (110), Expect(2) = 3e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F KLL+G+QP W+Y S SQRNRKRVQY + + V D V ++ K
Sbjct: 1125 FWKKLLKGKQPEWKYSSGLSQRNRKRVQYADDIQKNPVVEGDEVVKKRNK 1174
Score = 29.3 bits (64), Expect(2) = 3e-06
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 235 GGYSTNISLLGELHSQLKDEDRHRLFQDKTVGGK 134
G Y+TN L GE QL DE+ +F K + GK
Sbjct: 1100 GRYTTNFPLHGEQKIQLLDEELPHIFWKKLLKGK 1133
>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
Length = 1534
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F TKLLEGR P+W+Y S SQRNRKRVQY+ E+S+ + D V +++K
Sbjct: 559 FWTKLLEGRYPQWKYSSGPSQRNRKRVQYFDESSKRSEHESDEVVKKRRK 608
>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
Length = 1452
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -3
Query: 159 FRTKLLEGRQPRWRYLSLSSQRNRKRVQYYVETSETNVQVDDTVNMQKKK 10
F TKLLEGR P+W+Y S SQRNRKRVQY+ E+S+ + D V +++K
Sbjct: 1239 FWTKLLEGRYPQWKYSSGPSQRNRKRVQYFDESSKRSEHESDEVVKKRRK 1288