BLASTX nr result
ID: Rheum21_contig00035444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035444
(297 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB89638.1| Chlorophyll a-b binding protein 13 [Morus notabilis] 55 7e-06
ref|XP_006657834.1| PREDICTED: chlorophyll a-b binding protein o... 55 7e-06
gb|ESW21625.1| hypothetical protein PHAVU_005G085800g [Phaseolus... 55 7e-06
ref|XP_006451998.1| hypothetical protein CICLE_v10009198mg [Citr... 55 7e-06
ref|XP_002317529.2| hypothetical protein POPTR_0011s12680g [Popu... 55 7e-06
ref|XP_004958023.1| PREDICTED: chlorophyll a-b binding protein o... 55 7e-06
ref|XP_004487657.1| PREDICTED: chlorophyll a-b binding protein 1... 55 7e-06
gb|EMJ13010.1| hypothetical protein PRUPE_ppa009987mg [Prunus pe... 55 7e-06
ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 1... 55 7e-06
gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nico... 55 7e-06
gb|AAB82141.1| chlorophyll a-b binding protein [Oryza sativa Ind... 55 7e-06
gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding ... 55 7e-06
ref|NP_001059991.1| Os07g0562700 [Oryza sativa Japonica Group] g... 55 7e-06
tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII ty... 55 7e-06
gb|AFK48392.1| unknown [Lotus japonicus] 55 7e-06
gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [W... 55 7e-06
emb|CBI20377.3| unnamed protein product [Vitis vinifera] 55 7e-06
ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycin... 55 7e-06
ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycin... 55 7e-06
ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [S... 55 7e-06
>gb|EXB89638.1| Chlorophyll a-b binding protein 13 [Morus notabilis]
Length = 264
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 95 EVIHGRWAMLGALGCITPEVLEKW 118
>ref|XP_006657834.1| PREDICTED: chlorophyll a-b binding protein of LHCII type III,
chloroplastic-like [Oryza brachyantha]
Length = 268
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 99 EVIHGRWAMLGALGCITPEVLEKW 122
>gb|ESW21625.1| hypothetical protein PHAVU_005G085800g [Phaseolus vulgaris]
Length = 269
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 100 EVIHGRWAMLGALGCITPEVLEKW 123
>ref|XP_006451998.1| hypothetical protein CICLE_v10009198mg [Citrus clementina]
gi|568820321|ref|XP_006464671.1| PREDICTED: chlorophyll
a-b binding protein 13, chloroplastic-like [Citrus
sinensis] gi|557555224|gb|ESR65238.1| hypothetical
protein CICLE_v10009198mg [Citrus clementina]
Length = 268
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 99 EVIHGRWAMLGALGCITPEVLEKW 122
>ref|XP_002317529.2| hypothetical protein POPTR_0011s12680g [Populus trichocarpa]
gi|550328249|gb|EEE98141.2| hypothetical protein
POPTR_0011s12680g [Populus trichocarpa]
Length = 231
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 62 EVIHGRWAMLGALGCITPEVLEKW 85
>ref|XP_004958023.1| PREDICTED: chlorophyll a-b binding protein of LHCII type III,
chloroplastic-like [Setaria italica]
Length = 268
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 99 EVIHGRWAMLGALGCITPEVLEKW 122
>ref|XP_004487657.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cicer arietinum]
Length = 267
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 98 EVIHGRWAMLGALGCITPEVLEKW 121
>gb|EMJ13010.1| hypothetical protein PRUPE_ppa009987mg [Prunus persica]
Length = 269
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 100 EVIHGRWAMLGALGCITPEVLEKW 123
>ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus] gi|449532805|ref|XP_004173369.1|
PREDICTED: chlorophyll a-b binding protein 13,
chloroplastic-like [Cucumis sativus]
Length = 264
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 95 EVIHGRWAMLGALGCITPEVLEKW 118
>gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nicotiana tabacum]
Length = 199
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 30 EVIHGRWAMLGALGCITPEVLEKW 53
>gb|AAB82141.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 304
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 97 EVIHGRWAMLGALGCITPEVLEKW 120
>gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
Length = 269
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 100 EVIHGRWAMLGALGCITPEVLEKW 123
>ref|NP_001059991.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|34393384|dbj|BAC83393.1| putative chlorophyll A-B
binding protein of LHCII type III, chloroplast precursor
(CAB) [Oryza sativa Japonica Group]
gi|113611527|dbj|BAF21905.1| Os07g0562700 [Oryza sativa
Japonica Group] gi|125600722|gb|EAZ40298.1| hypothetical
protein OsJ_24743 [Oryza sativa Japonica Group]
gi|215678934|dbj|BAG96364.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215679381|dbj|BAG96521.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215692555|dbj|BAG87975.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737394|dbj|BAG96323.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737576|dbj|BAG96706.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737599|dbj|BAG96729.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767446|dbj|BAG99674.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767453|dbj|BAG99681.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 266
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 97 EVIHGRWAMLGALGCITPEVLEKW 120
>tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 1
[Zea mays] gi|414887114|tpg|DAA63128.1| TPA: chlorophyll
a-b binding protein of LHCII type III isoform 2 [Zea
mays]
Length = 269
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 100 EVIHGRWAMLGALGCITPEVLEKW 123
>gb|AFK48392.1| unknown [Lotus japonicus]
Length = 270
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 101 EVIHGRWAMLGALGCITPEVLEKW 124
>gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [Wolffia
australiana]
Length = 264
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 95 EVIHGRWAMLGALGCITPEVLEKW 118
>emb|CBI20377.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 62 EVIHGRWAMLGALGCITPEVLEKW 85
>ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycine max]
gi|255646132|gb|ACU23552.1| unknown [Glycine max]
Length = 268
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 99 EVIHGRWAMLGALGCITPEVLEKW 122
>ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycine max]
gi|255635333|gb|ACU18020.1| unknown [Glycine max]
Length = 267
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 98 EVIHGRWAMLGALGCITPEVLEKW 121
>ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
gi|241924233|gb|EER97377.1| hypothetical protein
SORBIDRAFT_02g036380 [Sorghum bicolor]
Length = 268
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 225 QVIHGRWAMLGALGCITPEVLEKW 296
+VIHGRWAMLGALGCITPEVLEKW
Sbjct: 99 EVIHGRWAMLGALGCITPEVLEKW 122