BLASTX nr result
ID: Rheum21_contig00035442
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035442
(419 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protei... 143 3e-32
gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [... 136 3e-30
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,... 136 3e-30
ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containi... 135 4e-30
emb|CBI35789.3| unnamed protein product [Vitis vinifera] 135 4e-30
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi... 135 4e-30
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera] 135 4e-30
ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
gb|EMS62346.1| hypothetical protein TRIUR3_16010 [Triticum urartu] 134 2e-29
ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containi... 132 6e-29
ref|XP_006601731.1| PREDICTED: uncharacterized protein LOC100305... 131 8e-29
gb|EMT11259.1| hypothetical protein F775_06295 [Aegilops tauschii] 131 8e-29
ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Popu... 131 8e-29
dbj|BAK00352.1| predicted protein [Hordeum vulgare subsp. vulgare] 129 4e-28
ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containi... 128 7e-28
ref|XP_003562458.1| PREDICTED: pentatricopeptide repeat-containi... 128 7e-28
ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [A... 128 9e-28
ref|XP_006441020.1| hypothetical protein CICLE_v10024364mg [Citr... 127 1e-27
ref|XP_002463378.1| hypothetical protein SORBIDRAFT_02g042720 [S... 127 1e-27
gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis] 127 2e-27
>gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 690
Score = 143 bits (360), Expect = 3e-32
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
DDFVY+++LKGLC AG ++AC FLYELVD GV+PN+VSYNI+I ACK GL+K AYQI+
Sbjct: 590 DDFVYASILKGLCHAGHFNQACHFLYELVDSGVTPNIVSYNIVIDKACKLGLRKEAYQIV 649
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVR 259
GEMRKNGL PDAVTWRILEKLHGNVR
Sbjct: 650 GEMRKNGLEPDAVTWRILEKLHGNVR 675
>gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [Prunus persica]
Length = 681
Score = 136 bits (342), Expect = 3e-30
Identities = 60/89 (67%), Positives = 75/89 (84%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D+FVY+ ++KG+C +GK EAC FLYELVD GVSPN+ SYNI+I ACK GLKK AY+++
Sbjct: 580 DNFVYAAIIKGICHSGKFDEACHFLYELVDAGVSPNIYSYNIVIDAACKLGLKKEAYEVV 639
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRNQF 268
EMR+NGL+PD+VTWRIL+KLHGN R QF
Sbjct: 640 KEMRRNGLAPDSVTWRILDKLHGNARKQF 668
>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 678
Score = 136 bits (342), Expect = 3e-30
Identities = 61/86 (70%), Positives = 75/86 (87%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
DDFVY+++LKGLC AGKL EAC FLYELVD GVSPN++SYNI+I +ACK G+K+ AYQ++
Sbjct: 592 DDFVYASILKGLCRAGKLDEACHFLYELVDSGVSPNIISYNIVIDSACKLGMKREAYQVV 651
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVR 259
EMRKNGL+PDAVTWRIL+KLH +
Sbjct: 652 TEMRKNGLTPDAVTWRILDKLHATFK 677
>ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Solanum lycopersicum]
Length = 676
Score = 135 bits (341), Expect = 4e-30
Identities = 62/89 (69%), Positives = 73/89 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D ++Y+ +LKGLC +GKL +ACDFLYEL DCGV+ VV+YNI+I AC G K+ AYQIL
Sbjct: 581 DSYIYAAILKGLCRSGKLHDACDFLYELADCGVTLCVVNYNIVINGACTLGWKREAYQIL 640
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRNQF 268
GEMRKNGL PDAVTWRIL+KLHGNV QF
Sbjct: 641 GEMRKNGLEPDAVTWRILDKLHGNVEKQF 669
>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 135 bits (341), Expect = 4e-30
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D+FVY+ +LKGLC +GKL+EACDFLYELVDCGV+ NVV+YNILI +ACK G K+ AY I+
Sbjct: 826 DNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIV 885
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNV 256
EM+KNGL+PDAVTWRIL KLHGNV
Sbjct: 886 QEMKKNGLTPDAVTWRILHKLHGNV 910
>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Vitis vinifera]
Length = 680
Score = 135 bits (341), Expect = 4e-30
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D+FVY+ +LKGLC +GKL+EACDFLYELVDCGV+ NVV+YNILI +ACK G K+ AY I+
Sbjct: 594 DNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIV 653
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNV 256
EM+KNGL+PDAVTWRIL KLHGNV
Sbjct: 654 QEMKKNGLTPDAVTWRILHKLHGNV 678
>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
Length = 959
Score = 135 bits (341), Expect = 4e-30
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D+FVY+ +LKGLC +GKL+EACDFLYELVDCGV+ NVV+YNILI +ACK G K+ AY I+
Sbjct: 873 DNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIV 932
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNV 256
EM+KNGL+PDAVTWRIL KLHGNV
Sbjct: 933 QEMKKNGLTPDAVTWRILHKLHGNV 957
>ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Solanum tuberosum]
Length = 680
Score = 135 bits (339), Expect = 7e-30
Identities = 61/89 (68%), Positives = 73/89 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D ++Y+ +LKGLC +GKL +ACDFLYELVDCGV V++YNI+I AC G K+ AYQIL
Sbjct: 581 DSYIYAAILKGLCRSGKLHDACDFLYELVDCGVPLCVINYNIVINGACTLGWKREAYQIL 640
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRNQF 268
GEMRKNGL PD+VTWRIL+KLHGNV QF
Sbjct: 641 GEMRKNGLEPDSVTWRILDKLHGNVEKQF 669
>gb|EMS62346.1| hypothetical protein TRIUR3_16010 [Triticum urartu]
Length = 591
Score = 134 bits (336), Expect = 2e-29
Identities = 61/82 (74%), Positives = 70/82 (85%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D +VYS +L+GLC GKL +ACDFLYEL DCGV P+VV YNI+I ACK GLKKLAYQ++
Sbjct: 380 DGYVYSAILRGLCKLGKLEQACDFLYELADCGVCPSVVCYNIVIDTACKRGLKKLAYQLV 439
Query: 182 GEMRKNGLSPDAVTWRILEKLH 247
EMR+NGLSPDAVTWRILEKLH
Sbjct: 440 KEMRRNGLSPDAVTWRILEKLH 461
>ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Fragaria vesca subsp. vesca]
Length = 682
Score = 132 bits (331), Expect = 6e-29
Identities = 57/89 (64%), Positives = 73/89 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D+FVY+ ++KG+C +G EAC FLYELVD GVSPN+ SYNI+I ACK GLKK AY+++
Sbjct: 580 DNFVYAAIIKGICHSGNFDEACHFLYELVDSGVSPNIFSYNIVIDTACKLGLKKEAYEVV 639
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRNQF 268
EM++NGLSPD+VTWRIL+K HGN R +F
Sbjct: 640 REMKRNGLSPDSVTWRILDKFHGNARKEF 668
>ref|XP_006601731.1| PREDICTED: uncharacterized protein LOC100305740 isoform X1 [Glycine
max]
Length = 852
Score = 131 bits (330), Expect = 8e-29
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D+FVY+ +LKGLC +GKL+EAC FLYELVD G+SPN+ SYNILI AC GLK AYQI+
Sbjct: 747 DNFVYAAILKGLCHSGKLNEACHFLYELVDSGISPNIFSYNILINCACNLGLKIEAYQIV 806
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVR 259
EM+KNGL+PD+VTWRIL+KLHG VR
Sbjct: 807 REMKKNGLTPDSVTWRILDKLHGKVR 832
>gb|EMT11259.1| hypothetical protein F775_06295 [Aegilops tauschii]
Length = 592
Score = 131 bits (330), Expect = 8e-29
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D +VYS +L+GLC GKL +ACDFLYEL D GV P+VV YNILI ACK GLKKLAYQ++
Sbjct: 380 DGYVYSAILRGLCKLGKLEQACDFLYELADSGVCPSVVCYNILIDTACKQGLKKLAYQLV 439
Query: 182 GEMRKNGLSPDAVTWRILEKLH 247
EMR+NGLSPDAVTWRILEKLH
Sbjct: 440 KEMRRNGLSPDAVTWRILEKLH 461
>ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Populus trichocarpa]
gi|222869094|gb|EEF06225.1| hypothetical protein
POPTR_0015s04490g [Populus trichocarpa]
Length = 668
Score = 131 bits (330), Expect = 8e-29
Identities = 60/87 (68%), Positives = 73/87 (83%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
DDFVY+ +LKGLC +G L+EA FLYELVD GV+PN+VSYNI+I AC G+K+ AYQI
Sbjct: 582 DDFVYAAILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIA 641
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRN 262
GEM+KNGL+PDAVTWR L+KLHG V+N
Sbjct: 642 GEMQKNGLTPDAVTWRTLDKLHGQVKN 668
>dbj|BAK00352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 729
Score = 129 bits (324), Expect = 4e-28
Identities = 60/82 (73%), Positives = 68/82 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D +VYS +L+GLC GKL +ACDFLYEL D GV P+VV YNILI ACK G KKLAYQ++
Sbjct: 520 DGYVYSAILRGLCKLGKLEQACDFLYELADSGVCPSVVCYNILIDTACKQGSKKLAYQLV 579
Query: 182 GEMRKNGLSPDAVTWRILEKLH 247
EMR+NGLSPDAVTWRILEKLH
Sbjct: 580 KEMRRNGLSPDAVTWRILEKLH 601
>ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like isoform X1 [Citrus sinensis]
gi|568848405|ref|XP_006478001.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X2 [Citrus sinensis]
gi|568848407|ref|XP_006478002.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X3 [Citrus sinensis]
gi|568848409|ref|XP_006478003.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X4 [Citrus sinensis]
Length = 676
Score = 128 bits (322), Expect = 7e-28
Identities = 58/89 (65%), Positives = 74/89 (83%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D++VY+ ++KGLC +GK++EA FLYELVD GV+PN+V YN++I ACK +K+ AYQIL
Sbjct: 584 DNYVYAAMIKGLCRSGKINEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 643
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRNQF 268
EMRKNGL+PDAVTWRIL+KLHGN N F
Sbjct: 644 REMRKNGLNPDAVTWRILDKLHGNRGNDF 672
>ref|XP_003562458.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Brachypodium distachyon]
Length = 737
Score = 128 bits (322), Expect = 7e-28
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D +VYS + +GLC GKL +ACDFLYELVD GV P VV YNIL+ ACK G+KKLAYQ++
Sbjct: 525 DGYVYSAIFRGLCKLGKLEQACDFLYELVDSGVFPGVVCYNILVDTACKQGMKKLAYQLV 584
Query: 182 GEMRKNGLSPDAVTWRILEKLH 247
EMR+NGLSPDAVTWRIL+KLH
Sbjct: 585 KEMRRNGLSPDAVTWRILDKLH 606
>ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [Amborella trichopoda]
gi|548831430|gb|ERM94238.1| hypothetical protein
AMTR_s00010p00213530 [Amborella trichopoda]
Length = 823
Score = 128 bits (321), Expect = 9e-28
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
DDFVY+ +LKG+C GK SEA +FLYELVD GVSP +V+YNILI +AC GLK+ AY+++
Sbjct: 585 DDFVYAAILKGMCKVGKFSEAINFLYELVDSGVSPKLVAYNILINSACNLGLKREAYRLI 644
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVR 259
EMRKNGL PDAVTWR L+KLHG +R
Sbjct: 645 SEMRKNGLEPDAVTWRTLDKLHGRLR 670
>ref|XP_006441020.1| hypothetical protein CICLE_v10024364mg [Citrus clementina]
gi|557543282|gb|ESR54260.1| hypothetical protein
CICLE_v10024364mg [Citrus clementina]
Length = 515
Score = 127 bits (320), Expect = 1e-27
Identities = 58/89 (65%), Positives = 73/89 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D++VY+ ++KGLC +GK+ EA FLYELVD GV+PN+V YN++I ACK +K+ AYQIL
Sbjct: 407 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 466
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRNQF 268
EMRKNGL+PDAVTWRIL+KLHGN N F
Sbjct: 467 REMRKNGLNPDAVTWRILDKLHGNRGNDF 495
>ref|XP_002463378.1| hypothetical protein SORBIDRAFT_02g042720 [Sorghum bicolor]
gi|241926755|gb|EER99899.1| hypothetical protein
SORBIDRAFT_02g042720 [Sorghum bicolor]
Length = 782
Score = 127 bits (320), Expect = 1e-27
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
DD+VYS + KGLC KL +ACDFLYELVDCGV+P+VV YNILI ACK G KLAYQ++
Sbjct: 555 DDYVYSAIFKGLCKQKKLEQACDFLYELVDCGVAPSVVCYNILIDAACKQGSNKLAYQLV 614
Query: 182 GEMRKNGLSPDAVTWRILEKLH 247
EM++NGL+PDAVTWRIL KLH
Sbjct: 615 KEMKRNGLAPDAVTWRILSKLH 636
>gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis]
Length = 714
Score = 127 bits (319), Expect = 2e-27
Identities = 67/112 (59%), Positives = 77/112 (68%)
Frame = +2
Query: 2 DDFVYSTVLKGLCCAGKLSEACDFLYELVDCGVSPNVVSYNILIGNACKSGLKKLAYQIL 181
D+FVY+ +LKGLC G EAC FLYELVD GVSPN+ SYNILI +ACK GLK AYQI+
Sbjct: 600 DNFVYAAILKGLCRLGNFGEACHFLYELVDSGVSPNIFSYNILIDSACKLGLKDEAYQIV 659
Query: 182 GEMRKNGLSPDAVTWRILEKLHGNVRNQFIT*GMWFEGNHRFMRFSSLIKME 337
EMR+NGL+PDAVTWRIL+KL N R + F N S L KME
Sbjct: 660 REMRRNGLNPDAVTWRILDKLPRNSRK------LTFVDNSTLQPGSGLPKME 705