BLASTX nr result

ID: Rheum21_contig00035396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035396
         (225 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...    67   2e-09
ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264...    65   7e-09
ref|XP_006362703.1| PREDICTED: probable protein phosphatase 2C 7...    62   6e-08
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...    62   8e-08
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668...    61   1e-07
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                61   2e-07
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    60   3e-07
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    60   3e-07
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    59   7e-07
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   2e-06
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...    57   3e-06
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...    57   3e-06
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...    56   6e-06
emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis ...    56   6e-06
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    55   8e-06
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...    55   1e-05

>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/73 (42%), Positives = 46/73 (63%)
 Frame = -3

Query: 220 LVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDDI 41
           + MEYLSR  K +   K FK+HP+ A++ +THLC ADDL +F+ G+L +I  ++K   + 
Sbjct: 462 IAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEF 521

Query: 40  CSKASLSINSNKS 2
              + L  N NKS
Sbjct: 522 SQASGLQANLNKS 534


>ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264629 [Solanum
           lycopersicum]
          Length = 261

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/73 (38%), Positives = 45/73 (61%)
 Frame = -3

Query: 220 LVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDDI 41
           + M+YLSR  K +   K F++HPRC+++ +THLC ADDL +FA G+L ++  ++      
Sbjct: 152 IAMKYLSRLLKGLKEDKQFRYHPRCSKLDITHLCFADDLLMFARGDLKSVKAIQLCFSQF 211

Query: 40  CSKASLSINSNKS 2
              + L  N +KS
Sbjct: 212 SQASRLQANLSKS 224


>ref|XP_006362703.1| PREDICTED: probable protein phosphatase 2C 75-like [Solanum
           tuberosum]
          Length = 509

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/74 (47%), Positives = 40/74 (54%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           VLVMEYLSR  K MS    FKFHP C  + LTHL  ADDL IF  G    +  V + LD 
Sbjct: 63  VLVMEYLSRVLKVMSASPYFKFHPMCKNLKLTHLVFADDLLIFCSGKEQFVRRVMEALDH 122

Query: 43  ICSKASLSINSNKS 2
                 +  N +KS
Sbjct: 123 FTRVTGMIANMDKS 136


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 24/73 (32%), Positives = 46/73 (63%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           +LVMEYL+R   Q+ ++ +F +H +C ++ +T+LC ADDL +F+ G++ ++ I+    + 
Sbjct: 481 ILVMEYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNT 540

Query: 43  ICSKASLSINSNK 5
                 L +N +K
Sbjct: 541 FLRSMGLHVNPSK 553


>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
          Length = 477

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/74 (39%), Positives = 44/74 (59%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           VL +EY S   + +    +FKFHP C  V L+HL  ADD+ + + G+L +++ +   L  
Sbjct: 98  VLCLEYFSCDLQSLKDNINFKFHPTCDVVQLSHLAFADDIMLLSRGDLPSVSTIFAKLQH 157

Query: 43  ICSKASLSINSNKS 2
            C+   LSIN+NKS
Sbjct: 158 FCNVLGLSINTNKS 171


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/74 (36%), Positives = 45/74 (60%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           V+ M+ LS+   + + ++ F FHP+C R+GLTHL  ADDL + + G   +I  + +  D+
Sbjct: 315 VICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDE 374

Query: 43  ICSKASLSINSNKS 2
            C ++ L I+  KS
Sbjct: 375 FCKRSGLRISLEKS 388


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           V+ ME LS+   Q +  K F FHP+C  +GLTHLC ADDL I   G + ++  + + ++ 
Sbjct: 585 VISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNL 644

Query: 43  ICSKASLSINSNKS 2
              ++ L IN  K+
Sbjct: 645 FAKRSGLKINMEKT 658


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           V+ M+ LSR   + +  ++F +HPRC  +GLTHLC ADDL I   G + ++  + K L+ 
Sbjct: 389 VISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQ 448

Query: 43  ICSKASLSINSNKS 2
             +K  L I   K+
Sbjct: 449 FAAKLGLKICMEKT 462


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           V+ ME LS+   Q +  K F FHP+C  +GLTHLC ADDL I   G + ++  + + ++ 
Sbjct: 73  VISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNL 132

Query: 43  ICSKASLSINSNKS 2
              ++ L IN  K+
Sbjct: 133 FAKRSGLQINMEKT 146


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/73 (38%), Positives = 41/73 (56%)
 Frame = -3

Query: 220 LVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDDI 41
           L MEYLSR    M +  +F FHP+C R+ LTHL  ADDL +FA  + ++I+ +    +  
Sbjct: 657 LSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSF 716

Query: 40  CSKASLSINSNKS 2
              + L  +  KS
Sbjct: 717 SKASGLQASIEKS 729


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = -3

Query: 184 MSRLKD---FKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDDICSKASLSIN 14
           MS LKD   FKFHP CA + L HL  ADD+   + G++ +++ +   L   C  + LSIN
Sbjct: 1   MSNLKDDANFKFHPNCAGIQLFHLAFADDIMFLSRGDIPSVSTMFAKLQHFCRVSGLSIN 60

Query: 13  SNKS 2
           S+KS
Sbjct: 61  SDKS 64


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/73 (32%), Positives = 44/73 (60%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           V+VME L+R   +M +  DF +HP+C ++ +T+LC ADDL +F+ G+  ++ ++ +  + 
Sbjct: 39  VIVMECLNRYLYKMQKDGDFNYHPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYES 98

Query: 43  ICSKASLSINSNK 5
                 L +N  K
Sbjct: 99  FSKATGLLVNPQK 111


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/73 (36%), Positives = 39/73 (53%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           VL+MEY +R   +M R   F  H +C R+G+THL  ADD+F+   G+  +I ++ K    
Sbjct: 142 VLMMEYFNRIMVKMQRNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSF 201

Query: 43  ICSKASLSINSNK 5
                 L IN  K
Sbjct: 202 FSKSTGLQINPAK 214


>emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268153|emb|CAB78489.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 318

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/74 (32%), Positives = 43/74 (58%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           V+VM+ LS+   + + L+ F +HP+C  +GLTHL  ADD+ +   G L ++  + +  D 
Sbjct: 104 VIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDS 163

Query: 43  ICSKASLSINSNKS 2
              ++ L I+  K+
Sbjct: 164 FAKQSCLKISMEKT 177


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/74 (32%), Positives = 43/74 (58%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           V+VM+ LS+   + + L+ F +HP+C  +GLTHL  ADD+ +   G L ++  + +  D 
Sbjct: 186 VIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDS 245

Query: 43  ICSKASLSINSNKS 2
              ++ L I+  K+
Sbjct: 246 FAKQSGLKISMAKT 259


>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/74 (33%), Positives = 44/74 (59%)
 Frame = -3

Query: 223 VLVMEYLSRSFKQMSRLKDFKFHPRCARVGLTHLCSADDLFIFAHGNLATITIVKKHLDD 44
           VL +EY +R  + +    +F+F+P CA   L+HL  ADD+ + + G+L +++ +   L  
Sbjct: 39  VLYIEYFARDIQSLKDNANFQFNPNCAVTQLSHLTFADDIMLLSRGDLPSVSAIYAKLQH 98

Query: 43  ICSKASLSINSNKS 2
            C+ + LSI+S  S
Sbjct: 99  FCNVSGLSISSRWS 112