BLASTX nr result
ID: Rheum21_contig00035360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035360
(547 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB29033.1| ATP-dependent RNA helicase DHX29 [Morus notabilis] 64 3e-08
ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 62 7e-08
ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 62 7e-08
ref|XP_006385023.1| hypothetical protein POPTR_0004s231601g, par... 62 7e-08
gb|EMJ26663.1| hypothetical protein PRUPE_ppa000230mg [Prunus pe... 62 7e-08
ref|XP_002328702.1| predicted protein [Populus trichocarpa] 62 7e-08
ref|XP_004975642.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 62 9e-08
emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group] g... 62 9e-08
gb|EAZ30792.1| hypothetical protein OsJ_14858 [Oryza sativa Japo... 62 9e-08
gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indi... 62 9e-08
ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 60 3e-07
ref|XP_003581237.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 60 3e-07
ref|XP_006431709.1| hypothetical protein CICLE_v100000302mg, par... 60 3e-07
ref|XP_006300903.1| hypothetical protein CARUB_v10021272mg [Caps... 60 3e-07
gb|EMT27855.1| ATP-dependent RNA helicase Dhx29 [Aegilops tauschii] 60 3e-07
gb|AAO42847.1| At1g58060 [Arabidopsis thaliana] 60 3e-07
gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thali... 60 3e-07
ref|NP_176103.2| RNA helicase family protein [Arabidopsis thalia... 60 3e-07
ref|NP_176102.1| RNA helicase family protein [Arabidopsis thalia... 60 3e-07
dbj|BAE99490.1| hypothetical protein [Arabidopsis thaliana] 60 3e-07
>gb|EXB29033.1| ATP-dependent RNA helicase DHX29 [Morus notabilis]
Length = 1411
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 5 AAAQTAVLFKELKSMLQSFLKELIRKPMTT-AAANEVVESIVQLLLEESKPQI 160
A AQTAVLFKEL+S L S LKELIRKP A+N+V+ SI+ LLLEE KP +
Sbjct: 1359 APAQTAVLFKELRSTLHSILKELIRKPENVDVASNKVISSIIHLLLEEDKPPV 1411
>ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X2 [Citrus
sinensis]
Length = 1245
Score = 62.4 bits (150), Expect = 7e-08
Identities = 33/53 (62%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPM-TTAAANEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S L+++IR P +T A NEVV+S++QLLLEE KPQ
Sbjct: 1192 TAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEEDKPQ 1244
>ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Citrus
sinensis]
Length = 1455
Score = 62.4 bits (150), Expect = 7e-08
Identities = 33/53 (62%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPM-TTAAANEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S L+++IR P +T A NEVV+S++QLLLEE KPQ
Sbjct: 1402 TAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEEDKPQ 1454
>ref|XP_006385023.1| hypothetical protein POPTR_0004s231601g, partial [Populus
trichocarpa] gi|550341791|gb|ERP62820.1| hypothetical
protein POPTR_0004s231601g, partial [Populus trichocarpa]
Length = 1051
Score = 62.4 bits (150), Expect = 7e-08
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 AAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQ 157
A+AQ AVLFKEL+S L + LKELIRKP T NEVV+S++QLLL+E KPQ
Sbjct: 999 ASAQYAVLFKELRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQ 1050
>gb|EMJ26663.1| hypothetical protein PRUPE_ppa000230mg [Prunus persica]
Length = 1426
Score = 62.4 bits (150), Expect = 7e-08
Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKP 154
+A AQTAVLFKEL+ L S LKELIRKP +T A NEV+ SI+ LLLEE KP
Sbjct: 1373 TAPAQTAVLFKELRLTLHSVLKELIRKPENSTVAYNEVLRSIIHLLLEEDKP 1424
>ref|XP_002328702.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 62.4 bits (150), Expect = 7e-08
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 AAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQ 157
A+AQ AVLFKEL+S L + LKELIRKP T NEVV+S++QLLL+E KPQ
Sbjct: 274 ASAQYAVLFKELRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQ 325
>ref|XP_004975642.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X1 [Setaria
italica] gi|514801478|ref|XP_004975643.1| PREDICTED:
ATP-dependent RNA helicase Dhx29-like isoform X2 [Setaria
italica] gi|514801480|ref|XP_004975644.1| PREDICTED:
ATP-dependent RNA helicase Dhx29-like isoform X3 [Setaria
italica] gi|514801482|ref|XP_004975645.1| PREDICTED:
ATP-dependent RNA helicase Dhx29-like isoform X4 [Setaria
italica]
Length = 1429
Score = 62.0 bits (149), Expect = 9e-08
Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQI 160
SAAAQTAVLFK+L+ L + LKEL RKP M T NEVV SI+ LLLEE K Q+
Sbjct: 1375 SAAAQTAVLFKQLRITLDAVLKELTRKPEMATFVDNEVVRSIIHLLLEEDKAQL 1428
>emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group]
gi|116309362|emb|CAH66443.1| B0308C03.3 [Oryza sativa
Indica Group]
Length = 1439
Score = 62.0 bits (149), Expect = 9e-08
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQ 157
+AAAQTAVLFK+L+ L + LKELIRKP M T NEVV SI+ LLLEE K Q
Sbjct: 1385 AAAAQTAVLFKQLRVTLDAVLKELIRKPEMATFVDNEVVRSIIHLLLEEEKAQ 1437
>gb|EAZ30792.1| hypothetical protein OsJ_14858 [Oryza sativa Japonica Group]
Length = 1388
Score = 62.0 bits (149), Expect = 9e-08
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQ 157
+AAAQTAVLFK+L+ L + LKELIRKP M T NEVV SI+ LLLEE K Q
Sbjct: 1334 AAAAQTAVLFKQLRVTLDAVLKELIRKPEMATFVDNEVVRSIIHLLLEEEKAQ 1386
>gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indica Group]
Length = 1439
Score = 62.0 bits (149), Expect = 9e-08
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQ 157
+AAAQTAVLFK+L+ L + LKELIRKP M T NEVV SI+ LLLEE K Q
Sbjct: 1385 AAAAQTAVLFKQLRVTLDAVLKELIRKPEMATFVDNEVVRSIIHLLLEEEKAQ 1437
>ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Fragaria vesca
subsp. vesca]
Length = 1456
Score = 60.5 bits (145), Expect = 3e-07
Identities = 34/52 (65%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPMT-TAAANEVVESIVQLLLEESKP 154
+A AQTAVLFKEL+ L S LKELIRKP T NEV+ SI+ LLLEE KP
Sbjct: 1402 TAPAQTAVLFKELRLTLHSVLKELIRKPENCTVGHNEVLRSIIHLLLEEDKP 1453
>ref|XP_003581237.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Brachypodium
distachyon]
Length = 1418
Score = 60.5 bits (145), Expect = 3e-07
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQ 157
+AAAQTAVLFK+L+ L + LKEL RKP M T NEVV SIV LLLEE K Q
Sbjct: 1364 TAAAQTAVLFKQLRITLDAVLKELTRKPEMATFVDNEVVRSIVHLLLEEDKAQ 1416
>ref|XP_006431709.1| hypothetical protein CICLE_v100000302mg, partial [Citrus
clementina] gi|557533831|gb|ESR44949.1| hypothetical
protein CICLE_v100000302mg, partial [Citrus clementina]
Length = 354
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPM-TTAAANEVVESIVQLLLEESKPQ 157
+A AQ AVLFKEL+ L S L+++IR P +T A NEVV+S++QLLLEE KPQ
Sbjct: 301 TAPAQIAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEEDKPQ 353
>ref|XP_006300903.1| hypothetical protein CARUB_v10021272mg [Capsella rubella]
gi|482569613|gb|EOA33801.1| hypothetical protein
CARUB_v10021272mg [Capsella rubella]
Length = 1455
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPMTTAAA-NEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S LK+LIRKP + NEVV+S+V LL+EE KPQ
Sbjct: 1401 AAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKPQ 1453
>gb|EMT27855.1| ATP-dependent RNA helicase Dhx29 [Aegilops tauschii]
Length = 755
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKP-MTTAAANEVVESIVQLLLEESKPQ 157
+AAAQTAVLFK+L+ L + LKEL RKP M T NEVV SI+ LLLEE K Q
Sbjct: 701 TAAAQTAVLFKQLRITLDAVLKELTRKPEMATFVDNEVVRSIIHLLLEEEKAQ 753
>gb|AAO42847.1| At1g58060 [Arabidopsis thaliana]
Length = 260
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPMTTAAA-NEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S LK+LIRKP + NEVV+S+V LL+EE KPQ
Sbjct: 206 AAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKPQ 258
>gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thaliana]
Length = 1453
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPMTTAAA-NEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S LK+LIRKP + NEVV+S+V LL+EE KPQ
Sbjct: 1399 AAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKPQ 1451
>ref|NP_176103.2| RNA helicase family protein [Arabidopsis thaliana]
gi|332195372|gb|AEE33493.1| RNA helicase family protein
[Arabidopsis thaliana]
Length = 1459
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPMTTAAA-NEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S LK+LIRKP + NEVV+S+V LL+EE KPQ
Sbjct: 1405 AAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKPQ 1457
>ref|NP_176102.1| RNA helicase family protein [Arabidopsis thaliana]
gi|12321256|gb|AAG50700.1|AC079604_7 hypothetical protein
[Arabidopsis thaliana] gi|332195370|gb|AEE33491.1| RNA
helicase family protein [Arabidopsis thaliana]
Length = 1417
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPMTTAAA-NEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S LK+LIRKP + NEVV+S+V LL+EE KPQ
Sbjct: 1363 TAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKPQ 1415
>dbj|BAE99490.1| hypothetical protein [Arabidopsis thaliana]
Length = 288
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 SAAAQTAVLFKELKSMLQSFLKELIRKPMTTAAA-NEVVESIVQLLLEESKPQ 157
+A AQTAVLFKEL+ L S LK+LIRKP + NEVV+S+V LL+EE KPQ
Sbjct: 234 AAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKPQ 286