BLASTX nr result

ID: Rheum21_contig00035086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00035086
         (507 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW08261.1| hypothetical protein PHAVU_009G032200g [Phaseolus...    79   8e-13
ref|XP_006580920.1| PREDICTED: uncharacterized protein LOC100305...    77   2e-12
ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoformX1...    77   2e-12
gb|EXB75363.1| F-box protein FBW2 [Morus notabilis]                    77   3e-12
ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus ...    73   3e-11
gb|EOY15962.1| F-box with wd-40 2 isoform 3 [Theobroma cacao]          73   4e-11
gb|EOY15960.1| F-box with wd-40 2 isoform 1 [Theobroma cacao] gi...    73   4e-11
ref|XP_002285756.2| PREDICTED: F-box protein FBW2 [Vitis vinifera]     73   4e-11
emb|CBI19188.3| unnamed protein product [Vitis vinifera]               73   4e-11
emb|CAN62342.1| hypothetical protein VITISV_035646 [Vitis vinifera]    73   4e-11
ref|NP_567343.1| F-box with WD-40 2 [Arabidopsis thaliana] gi|30...    72   6e-11
ref|XP_006397241.1| hypothetical protein EUTSA_v10028810mg [Eutr...    72   6e-11
ref|XP_004500641.1| PREDICTED: F-box protein FBW2-like [Cicer ar...    72   6e-11
ref|XP_004299655.1| PREDICTED: F-box protein FBW2-like [Fragaria...    72   6e-11
ref|XP_002874499.1| F-box family protein [Arabidopsis lyrata sub...    72   6e-11
ref|XP_006286533.1| hypothetical protein CARUB_v10001489mg [Caps...    72   8e-11
ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis ...    71   2e-10
ref|XP_006472577.1| PREDICTED: F-box protein FBW2-like isoform X...    70   2e-10
ref|XP_006433952.1| hypothetical protein CICLE_v10001853mg [Citr...    70   2e-10
ref|XP_006433950.1| hypothetical protein CICLE_v10001853mg [Citr...    70   2e-10

>gb|ESW08261.1| hypothetical protein PHAVU_009G032200g [Phaseolus vulgaris]
           gi|561009355|gb|ESW08262.1| hypothetical protein
           PHAVU_009G032200g [Phaseolus vulgaris]
          Length = 321

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/72 (52%), Positives = 50/72 (69%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           IS TMPKLKHL + Y  I+ S VL +L+ CP LE LD +G WGVTLD   L++K+P +KV
Sbjct: 183 ISSTMPKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDNMFLKQKFPKLKV 242

Query: 189 VGPEIRALSDSD 224
           +GP +    +SD
Sbjct: 243 LGPFVLDTYESD 254


>ref|XP_006580920.1| PREDICTED: uncharacterized protein LOC100305923 isoform X1 [Glycine
           max] gi|571457861|ref|XP_006580921.1| PREDICTED:
           uncharacterized protein LOC100305923 isoform X2 [Glycine
           max] gi|571457863|ref|XP_006580922.1| PREDICTED:
           uncharacterized protein LOC100305923 isoform X3 [Glycine
           max]
          Length = 321

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLKHL + Y  I+ S VL +L+ CP LE LD +G WGVTLD   L++K+P +KV
Sbjct: 183 IASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDHMFLKQKFPKLKV 242

Query: 189 VGPEIRALSDSD 224
           +GP +    +SD
Sbjct: 243 LGPLVLDTYESD 254


>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoformX1 [Glycine max]
           gi|571450021|ref|XP_006578316.1| PREDICTED: F-box
           protein FBW2-like isoform X2 [Glycine max]
           gi|571450023|ref|XP_006578317.1| PREDICTED: F-box
           protein FBW2-like isoform X3 [Glycine max]
           gi|571450025|ref|XP_006578318.1| PREDICTED: F-box
           protein FBW2-like isoform X4 [Glycine max]
          Length = 321

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLKHL + Y  I+ S VL +L+ CP LE LD +G WGVTLD   L++K+P +KV
Sbjct: 183 IASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDHMFLKQKFPKLKV 242

Query: 189 VGPEIRALSDSD 224
           +GP +    +SD
Sbjct: 243 LGPFVLDTYESD 254


>gb|EXB75363.1| F-box protein FBW2 [Morus notabilis]
          Length = 791

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLKHL + Y  I  S VL +LS+CP LE LD++G W V LD K ++E +P +KV
Sbjct: 651 IATTMPKLKHLEMAYHLIGTSSVLQILSSCPELEFLDLRGCWSVILDNKFVKENFPKLKV 710

Query: 189 VGPEI 203
           +GP++
Sbjct: 711 LGPDV 715


>ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547036|gb|EEF48533.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 329

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTY-LRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIK 185
           I+ TMPKLKHL + Y L IN   VL +LS+CP LE L++ G W V  D   L+EK+P +K
Sbjct: 183 IASTMPKLKHLEVAYHLLINTESVLKILSSCPELEFLNLTGCWDVKFDRNFLQEKFPKLK 242

Query: 186 VVGPEIRALSDSDHSGSW 239
           VVGP +    D +  G +
Sbjct: 243 VVGPHLLDYYDMNDWGDY 260


>gb|EOY15962.1| F-box with wd-40 2 isoform 3 [Theobroma cacao]
          Length = 345

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/72 (44%), Positives = 49/72 (68%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMP+LK L + Y RI+   VL +LS+CP L+ LD++G W V LD + L+EK+P +K+
Sbjct: 207 IAATMPRLKRLEMAYHRISTGSVLKILSSCPQLDFLDLRGCWDVKLDAQFLKEKFPKLKI 266

Query: 189 VGPEIRALSDSD 224
           +GP +    + D
Sbjct: 267 LGPLVMDYYEMD 278


>gb|EOY15960.1| F-box with wd-40 2 isoform 1 [Theobroma cacao]
           gi|508724064|gb|EOY15961.1| F-box with wd-40 2 isoform 1
           [Theobroma cacao]
          Length = 321

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/72 (44%), Positives = 49/72 (68%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMP+LK L + Y RI+   VL +LS+CP L+ LD++G W V LD + L+EK+P +K+
Sbjct: 183 IAATMPRLKRLEMAYHRISTGSVLKILSSCPQLDFLDLRGCWDVKLDAQFLKEKFPKLKI 242

Query: 189 VGPEIRALSDSD 224
           +GP +    + D
Sbjct: 243 LGPLVMDYYEMD 254


>ref|XP_002285756.2| PREDICTED: F-box protein FBW2 [Vitis vinifera]
          Length = 296

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLKHL + Y  ++   VL++LS CP LE LD++G W V L+ K L+EK+P ++V
Sbjct: 182 IATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPKLRV 241

Query: 189 VGPEI 203
           +GP +
Sbjct: 242 LGPVV 246


>emb|CBI19188.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLKHL + Y  ++   VL++LS CP LE LD++G W V L+ K L+EK+P ++V
Sbjct: 182 IATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPKLRV 241

Query: 189 VGPEI 203
           +GP +
Sbjct: 242 LGPVV 246


>emb|CAN62342.1| hypothetical protein VITISV_035646 [Vitis vinifera]
          Length = 225

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLKHL + Y  ++   VL++LS CP LE LD++G W V L+ K L+EK+P ++V
Sbjct: 106 IATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPKLRV 165

Query: 189 VGPEI 203
           +GP +
Sbjct: 166 LGPVV 170


>ref|NP_567343.1| F-box with WD-40 2 [Arabidopsis thaliana]
           gi|30680931|ref|NP_849346.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|42572853|ref|NP_974523.1|
           F-box with WD-40 2 [Arabidopsis thaliana]
           gi|145332987|ref|NP_001078359.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|238480265|ref|NP_001154215.1|
           F-box with WD-40 2 [Arabidopsis thaliana]
           gi|75267749|sp|Q9ZPE4.1|FBW2_ARATH RecName: Full=F-box
           protein FBW2; AltName: Full=SKP1-interacting partner 18
           gi|4325371|gb|AAD17367.1| contains similarity to
           Medicago truncatula N7 protein (GB:Y17613) [Arabidopsis
           thaliana] gi|7267540|emb|CAB78022.1| putative protein
           [Arabidopsis thaliana] gi|21536818|gb|AAM61150.1| F-box
           protein family, AtFBW2 [Arabidopsis thaliana]
           gi|27311651|gb|AAO00791.1| F-box protein family, AtFBW2
           [Arabidopsis thaliana] gi|30984530|gb|AAP42728.1|
           At4g08980 [Arabidopsis thaliana]
           gi|222423880|dbj|BAH19904.1| AT4G08980 [Arabidopsis
           thaliana] gi|332657303|gb|AEE82703.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|332657304|gb|AEE82704.1| F-box
           with WD-40 2 [Arabidopsis thaliana]
           gi|332657305|gb|AEE82705.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|332657306|gb|AEE82706.1| F-box
           with WD-40 2 [Arabidopsis thaliana]
           gi|332657307|gb|AEE82707.1| F-box with WD-40 2
           [Arabidopsis thaliana]
          Length = 317

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/78 (44%), Positives = 50/78 (64%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I++TMPKLK L + Y R++   VL +LS C  LE L+++G W V LD K  +EK+P++KV
Sbjct: 184 IANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMKV 243

Query: 189 VGPEIRALSDSDHSGSWE 242
           +GP  R +   D    WE
Sbjct: 244 LGP--RVIGFYDMINDWE 259


>ref|XP_006397241.1| hypothetical protein EUTSA_v10028810mg [Eutrema salsugineum]
           gi|557098258|gb|ESQ38694.1| hypothetical protein
           EUTSA_v10028810mg [Eutrema salsugineum]
          Length = 317

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/78 (44%), Positives = 50/78 (64%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I++TMPKLK L + Y R++   VL +LS C  LE L+++G W V LD K  +EK+P++KV
Sbjct: 184 IANTMPKLKRLEIAYHRVSTEGVLKILSCCNFLEFLELRGCWDVQLDNKFFKEKFPDMKV 243

Query: 189 VGPEIRALSDSDHSGSWE 242
           +GP  R +   D    WE
Sbjct: 244 LGP--RVIGFYDMINDWE 259


>ref|XP_004500641.1| PREDICTED: F-box protein FBW2-like [Cicer arietinum]
          Length = 317

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   LTISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPK-LLEEKYPN 179
           + I+ TMPKLKHL + Y RI+ S V  +LS CP LE LD++G WGV L+   LL++ +P 
Sbjct: 181 IAIATTMPKLKHLEMAYHRISTSGVDQILSNCPKLEFLDLRGCWGVNLENNMLLKQNFPM 240

Query: 180 IKVVGPEIRALSDSD 224
           +KV+GP +    +SD
Sbjct: 241 LKVLGPFVLGAYESD 255


>ref|XP_004299655.1| PREDICTED: F-box protein FBW2-like [Fragaria vesca subsp. vesca]
          Length = 288

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/75 (44%), Positives = 45/75 (60%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMP+LKHL + Y  IN    L +L +CP LE +D++G W V LD K   EK+P + V
Sbjct: 182 IATTMPRLKHLEIAYHIINTQGALQILESCPELEFMDLRGCWDVKLDDKFFGEKFPKLNV 241

Query: 189 VGPEIRALSDSDHSG 233
           +GP +    D D  G
Sbjct: 242 LGPSVDDCYDEDLEG 256


>ref|XP_002874499.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320336|gb|EFH50758.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/78 (44%), Positives = 51/78 (65%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I++TMPKLK L + Y R++   VL +LS+C  LE L+++G W V LD K  +EK+P++KV
Sbjct: 184 IANTMPKLKRLEIAYHRVSTEGVLKILSSCIFLEFLELRGCWDVQLDNKFFKEKFPDMKV 243

Query: 189 VGPEIRALSDSDHSGSWE 242
           +GP  R +   D    WE
Sbjct: 244 LGP--RVIGFYDMINDWE 259


>ref|XP_006286533.1| hypothetical protein CARUB_v10001489mg [Capsella rubella]
           gi|565453452|ref|XP_006286534.1| hypothetical protein
           CARUB_v10001489mg [Capsella rubella]
           gi|482555239|gb|EOA19431.1| hypothetical protein
           CARUB_v10001489mg [Capsella rubella]
           gi|482555240|gb|EOA19432.1| hypothetical protein
           CARUB_v10001489mg [Capsella rubella]
          Length = 317

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/78 (44%), Positives = 50/78 (64%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I++TMPKLK L + Y R++   VL +LS C  LE L+++G W V LD K  +EK+P++KV
Sbjct: 184 IANTMPKLKRLEIAYHRVSTEGVLKILSCCIFLEFLELRGCWDVQLDNKFFKEKFPDMKV 243

Query: 189 VGPEIRALSDSDHSGSWE 242
           +GP  R +   D    WE
Sbjct: 244 LGP--RVIGFYDMINDWE 259


>ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis sativus]
           gi|449524052|ref|XP_004169037.1| PREDICTED: F-box
           protein FBW2-like isoform 1 [Cucumis sativus]
           gi|449524054|ref|XP_004169038.1| PREDICTED: F-box
           protein FBW2-like isoform 2 [Cucumis sativus]
           gi|449524056|ref|XP_004169039.1| PREDICTED: F-box
           protein FBW2-like isoform 3 [Cucumis sativus]
          Length = 318

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +3

Query: 6   TISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIK 185
           TI+ TMPKLKHL + Y  ++   +L +LS+CP LE LD++G   V LD K L EK+P ++
Sbjct: 182 TIAATMPKLKHLEMAYHPLSTKSLLTILSSCPDLEFLDLRGCGDVRLDDKFLAEKFPKLR 241

Query: 186 VVGPEIR 206
           V+GP +R
Sbjct: 242 VLGPLVR 248


>ref|XP_006472577.1| PREDICTED: F-box protein FBW2-like isoform X1 [Citrus sinensis]
           gi|568837120|ref|XP_006472578.1| PREDICTED: F-box
           protein FBW2-like isoform X2 [Citrus sinensis]
          Length = 322

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLK L + Y  I+  +VL +LS+C +LE LD++G W V LD K ++  +PN+KV
Sbjct: 183 IASTMPKLKRLEMAYHVISTEIVLKILSSCTLLEFLDLRGCWDVKLDDKFMKGNFPNLKV 242

Query: 189 VGP 197
           +GP
Sbjct: 243 LGP 245


>ref|XP_006433952.1| hypothetical protein CICLE_v10001853mg [Citrus clementina]
           gi|557536074|gb|ESR47192.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
          Length = 206

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLK L + Y  I+  +VL +LS+C +LE LD++G W V LD K ++  +PN+KV
Sbjct: 67  IASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKV 126

Query: 189 VGP 197
           +GP
Sbjct: 127 LGP 129


>ref|XP_006433950.1| hypothetical protein CICLE_v10001853mg [Citrus clementina]
           gi|567882791|ref|XP_006433954.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536072|gb|ESR47190.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536076|gb|ESR47194.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
          Length = 252

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +3

Query: 9   ISHTMPKLKHLSLTYLRINCSVVLDLLSACPMLESLDIQGSWGVTLDPKLLEEKYPNIKV 188
           I+ TMPKLK L + Y  I+  +VL +LS+C +LE LD++G W V LD K ++  +PN+KV
Sbjct: 113 IASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKV 172

Query: 189 VGP 197
           +GP
Sbjct: 173 LGP 175


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